EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024400 (Gene tree)
Gene ID: 74320
Gene Symbol: Wdr33
Alias: 1110001N06Rik|2310011G05Rik|2810021O11Rik|8430413N20Rik|WDC146
Full Name: WD repeat domain 33
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 103308
Position: chr18: 31804090-31907397
Accession: 1921570
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000234957	-	1415	-	ENSMUSP00000157157	271 (aa)	-	UPI0000022335
ENSMUST00000234344	-	2416	-	ENSMUSP00000157238	312 (aa)	-	Q9D1P6
ENSMUST00000234937	-	608	-	-	- (aa)	-	-
ENSMUST00000025264	-	4575	XM_006526298	ENSMUSP00000025264	1330 (aa)	XP_006526361	Q8K4P0
ENSMUST00000234302	-	1756	-	-	- (aa)	-	-
ENSMUST00000082319	-	1115	-	ENSMUSP00000080936	255 (aa)	-	D3YX80
ENSMUST00000234137	-	3683	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000024400's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024400's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024400	Wdr33	98	95.041	ENSDARG00000018272	wdr33	83	87.243	Danio_rerio
ENSMUSG00000024400	Wdr33	83	71.564	FBgn0046222	Wdr33	57	67.442	Drosophila_melanogaster
ENSMUSG00000024400	Wdr33	100	95.961	ENSG00000136709	WDR33	100	100.000	Homo_sapiens
ENSMUSG00000024400	Wdr33	74	41.327	YNL317W		78	39.142	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001650	fibrillar center	-	ISO	Component
GO:0005581	collagen trimer	-	IEA	Component
GO:0005634	nucleus	11162572.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	21873635.	IBA	Component
GO:0006378	mRNA polyadenylation	21873635.	IBA	Process
GO:0006397	mRNA processing	-	IEA	Process