EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024422 (Gene tree)
Gene ID: 69192
Gene Symbol: Dhx16
Alias: 2410006N22Rik|DBP2|Ddx16
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 16
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 12852 bases
Position: chr17:35879819-35892670
Accession: 1916442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000025292	DEAD	PF00270.29	1e-06	1	1
ENSMUSP00000025292	HA2	PF04408.23	9.2e-20	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000173967	-	490	-	ENSMUSP00000133818	123 (aa)	-	G3UXT5
ENSMUST00000173596	-	462	-	-	- (aa)	-	-
ENSMUST00000174330	-	562	-	-	- (aa)	-	-
ENSMUST00000174366	-	3275	-	ENSMUSP00000133888	741 (aa)	-	Q05BH3
ENSMUST00000025292	-	3351	XM_006524873	ENSMUSP00000025292	1044 (aa)	XP_006524936	G3X8X0
ENSMUST00000174308	-	491	-	-	- (aa)	-	-
ENSMUST00000174449	-	566	-	-	- (aa)	-	-
ENSMUST00000172730	-	825	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000024422's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000024422	Dhx16	61	46.472	ENSMUSG00000040620	Dhx33	93	46.472
ENSMUSG00000024422	Dhx16	61	52.550	ENSMUSG00000029169	Dhx15	81	53.860
ENSMUSG00000024422	Dhx16	56	42.564	ENSMUSG00000027770	Dhx36	62	42.564
ENSMUSG00000024422	Dhx16	59	32.457	ENSMUSG00000030986	Dhx32	92	32.807
ENSMUSG00000024422	Dhx16	62	47.813	ENSMUSG00000027655	Dhx35	94	47.813
ENSMUSG00000024422	Dhx16	61	42.012	ENSMUSG00000018425	Dhx40	99	37.004
ENSMUSG00000024422	Dhx16	59	33.639	ENSMUSG00000009145	Dqx1	89	33.639
ENSMUSG00000024422	Dhx16	67	49.714	ENSMUSG00000037993	Dhx38	57	48.957
ENSMUSG00000024422	Dhx16	60	58.954	ENSMUSG00000034931	Dhx8	54	58.954
ENSMUSG00000024422	Dhx16	60	42.510	ENSMUSG00000029480	Dhx37	60	42.510

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024422	Dhx16	100	94.450	ENSG00000204560	DHX16	100	95.502	Homo_sapiens
ENSMUSG00000024422	Dhx16	100	68.786	ENSAPOG00000008825	dhx16	99	69.524	Acanthochromis_polyacanthus
ENSMUSG00000024422	Dhx16	100	95.407	ENSAMEG00000013213	DHX16	100	95.502	Ailuropoda_melanoleuca
ENSMUSG00000024422	Dhx16	99	72.201	ENSACIG00000021825	dhx16	99	72.562	Amphilophus_citrinellus
ENSMUSG00000024422	Dhx16	99	72.280	ENSAOCG00000024217	dhx16	99	71.887	Amphiprion_ocellaris
ENSMUSG00000024422	Dhx16	99	69.924	ENSAPEG00000022508	dhx16	99	70.124	Amphiprion_percula
ENSMUSG00000024422	Dhx16	99	72.348	ENSATEG00000006665	dhx16	99	72.598	Anabas_testudineus
ENSMUSG00000024422	Dhx16	99	75.142	ENSACAG00000010952	DHX16	99	74.953	Anolis_carolinensis
ENSMUSG00000024422	Dhx16	93	95.697	ENSANAG00000024212	DHX16	100	95.902	Aotus_nancymaae
ENSMUSG00000024422	Dhx16	99	70.907	ENSACLG00000010932	dhx16	99	73.940	Astatotilapia_calliptera
ENSMUSG00000024422	Dhx16	99	72.607	ENSAMXG00000005181	dhx16	99	72.529	Astyanax_mexicanus
ENSMUSG00000024422	Dhx16	100	95.411	ENSBTAG00000006960	DHX16	100	95.507	Bos_taurus
ENSMUSG00000024422	Dhx16	99	55.067	WBGene00003392	mog-4	99	54.762	Caenorhabditis_elegans
ENSMUSG00000024422	Dhx16	100	95.407	ENSCJAG00000019914	DHX16	100	95.598	Callithrix_jacchus
ENSMUSG00000024422	Dhx16	100	95.120	ENSCAFG00000000427	DHX16	100	95.215	Canis_familiaris
ENSMUSG00000024422	Dhx16	100	94.641	ENSCAFG00020017623	DHX16	100	94.737	Canis_lupus_dingo
ENSMUSG00000024422	Dhx16	100	94.145	ENSCHIG00000013356	DHX16	100	94.145	Capra_hircus
ENSMUSG00000024422	Dhx16	100	95.885	ENSTSYG00000029805	DHX16	100	96.172	Carlito_syrichta
ENSMUSG00000024422	Dhx16	94	94.070	ENSCAPG00000000092	DHX16	97	93.967	Cavia_aperea
ENSMUSG00000024422	Dhx16	100	94.067	ENSCPOG00000015415	DHX16	100	93.971	Cavia_porcellus
ENSMUSG00000024422	Dhx16	100	95.311	ENSCCAG00000025435	DHX16	100	95.502	Cebus_capucinus
ENSMUSG00000024422	Dhx16	100	95.694	ENSCATG00000021666	DHX16	100	95.885	Cercocebus_atys
ENSMUSG00000024422	Dhx16	93	93.961	ENSCLAG00000002398	DHX16	100	93.961	Chinchilla_lanigera
ENSMUSG00000024422	Dhx16	100	95.694	ENSCSAG00000008258	DHX16	100	95.885	Chlorocebus_sabaeus
ENSMUSG00000024422	Dhx16	64	88.806	ENSCHOG00000001224	DHX16	80	88.806	Choloepus_hoffmanni
ENSMUSG00000024422	Dhx16	99	75.786	ENSCPBG00000018837	DHX16	99	76.263	Chrysemys_picta_bellii
ENSMUSG00000024422	Dhx16	52	78.022	ENSCING00000006565	-	100	78.022	Ciona_intestinalis
ENSMUSG00000024422	Dhx16	99	61.010	ENSCSAVG00000003870	-	96	76.946	Ciona_savignyi
ENSMUSG00000024422	Dhx16	100	95.598	ENSCANG00000043736	DHX16	100	95.789	Colobus_angolensis_palliatus
ENSMUSG00000024422	Dhx16	100	97.990	ENSCGRG00001008329	Dhx16	100	97.990	Cricetulus_griseus_chok1gshd
ENSMUSG00000024422	Dhx16	98	96.602	ENSCGRG00000014687	Dhx16	100	96.602	Cricetulus_griseus_crigri
ENSMUSG00000024422	Dhx16	99	70.739	ENSCSEG00000012134	dhx16	99	70.845	Cynoglossus_semilaevis
ENSMUSG00000024422	Dhx16	99	57.634	ENSCVAG00000007009	dhx16	99	58.206	Cyprinodon_variegatus
ENSMUSG00000024422	Dhx16	99	71.955	ENSDARG00000013150	dhx16	99	71.848	Danio_rerio
ENSMUSG00000024422	Dhx16	84	80.800	ENSDNOG00000030864	DHX16	100	86.805	Dasypus_novemcinctus
ENSMUSG00000024422	Dhx16	100	94.545	ENSDORG00000003203	Dhx16	100	94.833	Dipodomys_ordii
ENSMUSG00000024422	Dhx16	86	66.260	FBgn0086444	l(2)37Cb	99	66.260	Drosophila_melanogaster
ENSMUSG00000024422	Dhx16	97	93.195	ENSETEG00000003121	DHX16	99	93.097	Echinops_telfairi
ENSMUSG00000024422	Dhx16	96	70.209	ENSEBUG00000001802	dhx16	99	69.821	Eptatretus_burgeri
ENSMUSG00000024422	Dhx16	92	93.388	ENSEASG00005019124	DHX16	99	96.142	Equus_asinus_asinus
ENSMUSG00000024422	Dhx16	100	96.080	ENSECAG00000008537	DHX16	100	96.080	Equus_caballus
ENSMUSG00000024422	Dhx16	99	71.768	ENSELUG00000015727	dhx16	99	72.175	Esox_lucius
ENSMUSG00000024422	Dhx16	100	95.215	ENSFCAG00000007693	DHX16	100	95.407	Felis_catus
ENSMUSG00000024422	Dhx16	93	95.184	ENSFDAG00000017458	DHX16	100	95.184	Fukomys_damarensis
ENSMUSG00000024422	Dhx16	99	72.201	ENSFHEG00000021509	dhx16	99	71.739	Fundulus_heteroclitus
ENSMUSG00000024422	Dhx16	99	69.553	ENSGMOG00000009282	dhx16	99	69.429	Gadus_morhua
ENSMUSG00000024422	Dhx16	99	71.698	ENSGAFG00000014389	dhx16	99	71.834	Gambusia_affinis
ENSMUSG00000024422	Dhx16	99	71.374	ENSGACG00000001768	dhx16	99	76.392	Gasterosteus_aculeatus
ENSMUSG00000024422	Dhx16	91	77.315	ENSGAGG00000003115	DHX16	99	78.125	Gopherus_agassizii
ENSMUSG00000024422	Dhx16	100	95.502	ENSGGOG00000022943	DHX16	100	95.694	Gorilla_gorilla
ENSMUSG00000024422	Dhx16	99	68.152	ENSHBUG00000009952	dhx16	99	68.596	Haplochromis_burtoni
ENSMUSG00000024422	Dhx16	100	94.928	ENSHGLG00000019290	DHX16	100	94.833	Heterocephalus_glaber_female
ENSMUSG00000024422	Dhx16	100	94.833	ENSHGLG00100017127	DHX16	100	94.737	Heterocephalus_glaber_male
ENSMUSG00000024422	Dhx16	99	71.618	ENSHCOG00000006805	dhx16	99	71.334	Hippocampus_comes
ENSMUSG00000024422	Dhx16	99	71.754	ENSIPUG00000001025	DHX16	99	71.605	Ictalurus_punctatus
ENSMUSG00000024422	Dhx16	100	96.172	ENSSTOG00000011881	DHX16	100	96.364	Ictidomys_tridecemlineatus
ENSMUSG00000024422	Dhx16	93	96.292	ENSJJAG00000000186	Dhx16	99	96.292	Jaculus_jaculus
ENSMUSG00000024422	Dhx16	99	71.958	ENSKMAG00000009246	dhx16	99	71.958	Kryptolebias_marmoratus
ENSMUSG00000024422	Dhx16	99	70.094	ENSLBEG00000017249	dhx16	99	70.388	Labrus_bergylta
ENSMUSG00000024422	Dhx16	58	74.468	ENSLACG00000002450	DHX16	99	74.632	Latimeria_chalumnae
ENSMUSG00000024422	Dhx16	100	96.077	ENSLAFG00000026904	DHX16	100	96.077	Loxodonta_africana
ENSMUSG00000024422	Dhx16	100	95.694	ENSMFAG00000003575	DHX16	100	95.885	Macaca_fascicularis
ENSMUSG00000024422	Dhx16	100	95.694	ENSMMUG00000019960	DHX16	100	95.885	Macaca_mulatta
ENSMUSG00000024422	Dhx16	100	95.694	ENSMNEG00000014580	DHX16	100	95.885	Macaca_nemestrina
ENSMUSG00000024422	Dhx16	100	95.694	ENSMLEG00000043805	DHX16	100	95.885	Mandrillus_leucophaeus
ENSMUSG00000024422	Dhx16	99	72.840	ENSMAMG00000009784	dhx16	99	72.667	Mastacembelus_armatus
ENSMUSG00000024422	Dhx16	99	71.134	ENSMZEG00005027755	dhx16	99	72.270	Maylandia_zebra
ENSMUSG00000024422	Dhx16	100	97.703	ENSMAUG00000001696	Dhx16	100	97.703	Mesocricetus_auratus
ENSMUSG00000024422	Dhx16	100	95.694	ENSMICG00000014819	DHX16	100	95.694	Microcebus_murinus
ENSMUSG00000024422	Dhx16	100	97.225	ENSMOCG00000010715	Dhx16	100	97.225	Microtus_ochrogaster
ENSMUSG00000024422	Dhx16	99	72.122	ENSMMOG00000016621	dhx16	99	72.302	Mola_mola
ENSMUSG00000024422	Dhx16	85	94.363	ENSMODG00000015890	DHX16	99	93.834	Monodelphis_domestica
ENSMUSG00000024422	Dhx16	99	71.293	ENSMALG00000003384	dhx16	99	70.734	Monopterus_albus
ENSMUSG00000024422	Dhx16	93	99.487	MGP_CAROLIEiJ_G0021538	Dhx16	100	99.487	Mus_caroli
ENSMUSG00000024422	Dhx16	100	99.425	MGP_PahariEiJ_G0020532	Dhx16	100	99.425	Mus_pahari
ENSMUSG00000024422	Dhx16	100	96.360	MGP_SPRETEiJ_G0022445	Dhx16	100	99.718	Mus_spretus
ENSMUSG00000024422	Dhx16	100	95.311	ENSMPUG00000011719	DHX16	94	95.407	Mustela_putorius_furo
ENSMUSG00000024422	Dhx16	100	92.727	ENSMLUG00000008932	DHX16	100	93.206	Myotis_lucifugus
ENSMUSG00000024422	Dhx16	100	96.463	ENSNGAG00000001106	Dhx16	100	96.463	Nannospalax_galili
ENSMUSG00000024422	Dhx16	99	71.943	ENSNBRG00000005624	dhx16	99	72.259	Neolamprologus_brichardi
ENSMUSG00000024422	Dhx16	100	94.481	ENSNLEG00000005270	DHX16	100	94.672	Nomascus_leucogenys
ENSMUSG00000024422	Dhx16	85	97.043	ENSMEUG00000012522	DHX16	85	97.043	Notamacropus_eugenii
ENSMUSG00000024422	Dhx16	100	94.742	ENSOPRG00000001864	DHX16	100	95.029	Ochotona_princeps
ENSMUSG00000024422	Dhx16	50	98.861	ENSODEG00000017885	DHX16	99	98.861	Octodon_degus
ENSMUSG00000024422	Dhx16	99	70.989	ENSONIG00000002234	dhx16	99	72.332	Oreochromis_niloticus
ENSMUSG00000024422	Dhx16	100	94.168	ENSOCUG00000002163	DHX16	100	94.359	Oryctolagus_cuniculus
ENSMUSG00000024422	Dhx16	99	72.460	ENSORLG00000015982	dhx16	99	86.267	Oryzias_latipes
ENSMUSG00000024422	Dhx16	99	72.365	ENSORLG00020014134	dhx16	99	72.175	Oryzias_latipes_hni
ENSMUSG00000024422	Dhx16	99	72.555	ENSORLG00015020617	dhx16	99	85.444	Oryzias_latipes_hsok
ENSMUSG00000024422	Dhx16	99	71.792	ENSOMEG00000019560	dhx16	99	72.091	Oryzias_melastigma
ENSMUSG00000024422	Dhx16	100	95.502	ENSOGAG00000008300	DHX16	100	95.694	Otolemur_garnettii
ENSMUSG00000024422	Dhx16	100	94.359	ENSOARG00000012046	DHX16	100	94.359	Ovis_aries
ENSMUSG00000024422	Dhx16	100	95.598	ENSPPAG00000025169	DHX16	100	95.789	Pan_paniscus
ENSMUSG00000024422	Dhx16	100	95.215	ENSPPRG00000000329	DHX16	100	95.407	Panthera_pardus
ENSMUSG00000024422	Dhx16	100	94.933	ENSPTIG00000010694	DHX16	100	94.933	Panthera_tigris_altaica
ENSMUSG00000024422	Dhx16	100	95.502	ENSPTRG00000017935	DHX16	100	95.694	Pan_troglodytes
ENSMUSG00000024422	Dhx16	52	96.344	ENSPANG00000018482	DHX16	98	96.344	Papio_anubis
ENSMUSG00000024422	Dhx16	99	71.604	ENSPKIG00000012693	dhx16	99	71.996	Paramormyrops_kingsleyae
ENSMUSG00000024422	Dhx16	99	69.135	ENSPSIG00000012007	DHX16	99	69.452	Pelodiscus_sinensis
ENSMUSG00000024422	Dhx16	99	69.158	ENSPMGG00000000154	dhx16	99	69.516	Periophthalmus_magnuspinnatus
ENSMUSG00000024422	Dhx16	100	97.799	ENSPEMG00000017508	Dhx16	100	97.799	Peromyscus_maniculatus_bairdii
ENSMUSG00000024422	Dhx16	100	90.526	ENSPCIG00000014991	DHX16	100	90.813	Phascolarctos_cinereus
ENSMUSG00000024422	Dhx16	99	72.427	ENSPFOG00000002575	dhx16	99	72.658	Poecilia_formosa
ENSMUSG00000024422	Dhx16	99	71.981	ENSPLAG00000014305	dhx16	99	72.212	Poecilia_latipinna
ENSMUSG00000024422	Dhx16	99	72.495	ENSPMEG00000006632	dhx16	99	72.753	Poecilia_mexicana
ENSMUSG00000024422	Dhx16	100	71.741	ENSPREG00000003371	dhx16	100	72.312	Poecilia_reticulata
ENSMUSG00000024422	Dhx16	100	95.120	ENSPPYG00000016415	DHX16	100	95.311	Pongo_abelii
ENSMUSG00000024422	Dhx16	100	90.718	ENSPCAG00000017034	DHX16	100	90.718	Procavia_capensis
ENSMUSG00000024422	Dhx16	100	95.981	ENSPCOG00000013298	DHX16	100	95.981	Propithecus_coquereli
ENSMUSG00000024422	Dhx16	92	97.411	ENSPVAG00000003984	DHX16	92	97.411	Pteropus_vampyrus
ENSMUSG00000024422	Dhx16	95	71.229	ENSPNYG00000018755	dhx16	99	71.872	Pundamilia_nyererei
ENSMUSG00000024422	Dhx16	99	72.144	ENSPNAG00000018065	dhx16	99	71.943	Pygocentrus_nattereri
ENSMUSG00000024422	Dhx16	100	98.373	ENSRNOG00000030157	Dhx16	100	98.373	Rattus_norvegicus
ENSMUSG00000024422	Dhx16	100	95.502	ENSRBIG00000039655	DHX16	100	95.694	Rhinopithecus_bieti
ENSMUSG00000024422	Dhx16	100	95.407	ENSRROG00000031909	DHX16	100	95.598	Rhinopithecus_roxellana
ENSMUSG00000024422	Dhx16	66	47.541	YNR011C	PRP2	83	47.541	Saccharomyces_cerevisiae
ENSMUSG00000024422	Dhx16	100	95.311	ENSSBOG00000020142	DHX16	100	95.502	Saimiri_boliviensis_boliviensis
ENSMUSG00000024422	Dhx16	100	90.239	ENSSHAG00000007234	DHX16	100	89.293	Sarcophilus_harrisii
ENSMUSG00000024422	Dhx16	100	72.684	ENSSFOG00015019853	dhx16	98	73.011	Scleropages_formosus
ENSMUSG00000024422	Dhx16	94	69.285	ENSSMAG00000019598	dhx16	99	69.293	Scophthalmus_maximus
ENSMUSG00000024422	Dhx16	99	72.254	ENSSDUG00000006948	dhx16	99	72.407	Seriola_dumerili
ENSMUSG00000024422	Dhx16	99	72.486	ENSSLDG00000012742	dhx16	99	72.122	Seriola_lalandi_dorsalis
ENSMUSG00000024422	Dhx16	99	76.448	ENSSPUG00000015145	DHX16	99	76.448	Sphenodon_punctatus
ENSMUSG00000024422	Dhx16	91	81.304	ENSSPAG00000012416	dhx16	99	81.304	Stegastes_partitus
ENSMUSG00000024422	Dhx16	100	95.220	ENSSSCG00000001376	DHX16	100	95.411	Sus_scrofa
ENSMUSG00000024422	Dhx16	99	72.008	ENSTRUG00000004927	dhx16	99	71.727	Takifugu_rubripes
ENSMUSG00000024422	Dhx16	99	70.141	ENSTNIG00000011641	dhx16	85	77.753	Tetraodon_nigroviridis
ENSMUSG00000024422	Dhx16	87	95.704	ENSTTRG00000008323	DHX16	87	95.704	Tursiops_truncatus
ENSMUSG00000024422	Dhx16	100	95.120	ENSUAMG00000026299	DHX16	99	98.669	Ursus_americanus
ENSMUSG00000024422	Dhx16	100	95.502	ENSUMAG00000019661	DHX16	94	95.694	Ursus_maritimus
ENSMUSG00000024422	Dhx16	100	95.024	ENSVVUG00000009831	DHX16	100	95.120	Vulpes_vulpes
ENSMUSG00000024422	Dhx16	99	65.455	ENSXETG00000024069	dhx16	100	66.500	Xenopus_tropicalis
ENSMUSG00000024422	Dhx16	96	71.683	ENSXCOG00000003774	dhx16	99	72.261	Xiphophorus_couchianus
ENSMUSG00000024422	Dhx16	99	72.011	ENSXMAG00000013293	dhx16	99	71.985	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	-	ISO	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005681	spliceosomal complex	21873635.	IBA	Component
GO:0005681	spliceosomal complex	-	ISO	Component
GO:0016887	ATPase activity	-	ISO	Function
GO:0034459	ATP-dependent 3'-5' RNA helicase activity	21873635.	IBA	Function