EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024436 (Gene tree)
Gene ID: 66973
Gene Symbol: Mrps18b
Alias: 2400002C15Rik
Full Name: mitochondrial ribosomal protein S18B
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 6011 bases
Position: chr17:35910379-35916389
Accession: 1914223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000025305	Ribosomal_S18	PF01084.20	7.2e-16	1	1
ENSMUSP00000109412	Ribosomal_S18	PF01084.20	1.1e-13	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000174807	-	848	-	ENSMUSP00000133584	188 (aa)	-	G3UX79
ENSMUST00000173792	-	441	-	-	- (aa)	-	-
ENSMUST00000113782	-	803	XM_006524807	ENSMUSP00000109412	162 (aa)	XP_006524870	Q99N84
ENSMUST00000174349	-	488	-	ENSMUSP00000134264	111 (aa)	-	G3UYX8
ENSMUST00000025305	-	1079	-	ENSMUSP00000025305	254 (aa)	-	Q99N84
ENSMUST00000172642	-	346	-	ENSMUSP00000134183	106 (aa)	-	G3UYQ9
ENSMUST00000174574	-	907	-	-	- (aa)	-	-
ENSMUST00000173737	-	743	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000024436's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024436's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024436	Mrps18b	100	77.821	ENSG00000204568	MRPS18B	99	77.821	Homo_sapiens
ENSMUSG00000024436	Mrps18b	78	47.236	ENSAPOG00000003719	mrps18b	81	47.236	Acanthochromis_polyacanthus
ENSMUSG00000024436	Mrps18b	100	78.599	ENSAMEG00000013279	MRPS18B	99	78.599	Ailuropoda_melanoleuca
ENSMUSG00000024436	Mrps18b	87	44.082	ENSACIG00000013156	mrps18b	99	44.082	Amphilophus_citrinellus
ENSMUSG00000024436	Mrps18b	69	52.299	ENSAOCG00000008569	mrps18b	71	52.299	Amphiprion_ocellaris
ENSMUSG00000024436	Mrps18b	69	52.299	ENSAPEG00000008204	mrps18b	71	52.299	Amphiprion_percula
ENSMUSG00000024436	Mrps18b	72	49.180	ENSATEG00000012949	mrps18b	74	49.180	Anabas_testudineus
ENSMUSG00000024436	Mrps18b	81	56.338	ENSACAG00000010755	MRPS18B	99	55.924	Anolis_carolinensis
ENSMUSG00000024436	Mrps18b	94	79.498	ENSANAG00000021210	MRPS18B	99	77.043	Aotus_nancymaae
ENSMUSG00000024436	Mrps18b	59	45.455	ENSACLG00000004576	-	73	45.455	Astatotilapia_calliptera
ENSMUSG00000024436	Mrps18b	85	47.685	ENSACLG00000015409	mrps18b	85	47.685	Astatotilapia_calliptera
ENSMUSG00000024436	Mrps18b	70	51.977	ENSAMXG00000034123	mrps18b	72	51.977	Astyanax_mexicanus
ENSMUSG00000024436	Mrps18b	100	78.988	ENSBTAG00000006936	MRPS18B	99	78.988	Bos_taurus
ENSMUSG00000024436	Mrps18b	100	75.486	ENSCJAG00000019949	MRPS18B	99	75.486	Callithrix_jacchus
ENSMUSG00000024436	Mrps18b	93	80.753	ENSCAFG00000000411	MRPS18B	99	78.125	Canis_familiaris
ENSMUSG00000024436	Mrps18b	93	80.753	ENSCAFG00020017573	MRPS18B	99	78.125	Canis_lupus_dingo
ENSMUSG00000024436	Mrps18b	100	78.988	ENSCHIG00000021770	MRPS18B	99	78.988	Capra_hircus
ENSMUSG00000024436	Mrps18b	98	77.778	ENSTSYG00000003333	MRPS18B	99	77.778	Carlito_syrichta
ENSMUSG00000024436	Mrps18b	96	76.923	ENSCAPG00000000098	MRPS18B	90	79.039	Cavia_aperea
ENSMUSG00000024436	Mrps18b	96	76.923	ENSCPOG00000015405	MRPS18B	88	79.039	Cavia_porcellus
ENSMUSG00000024436	Mrps18b	100	77.043	ENSCCAG00000037423	MRPS18B	99	77.043	Cebus_capucinus
ENSMUSG00000024436	Mrps18b	100	76.654	ENSCATG00000040250	MRPS18B	99	76.654	Cercocebus_atys
ENSMUSG00000024436	Mrps18b	96	80.567	ENSCLAG00000003282	MRPS18B	95	76.494	Chinchilla_lanigera
ENSMUSG00000024436	Mrps18b	100	76.654	ENSCSAG00000018793	-	99	76.654	Chlorocebus_sabaeus
ENSMUSG00000024436	Mrps18b	100	74.609	ENSCHOG00000005581	MRPS18B	99	74.609	Choloepus_hoffmanni
ENSMUSG00000024436	Mrps18b	72	63.736	ENSCPBG00000018833	MRPS18B	73	63.536	Chrysemys_picta_bellii
ENSMUSG00000024436	Mrps18b	100	76.654	ENSCANG00000043568	MRPS18B	99	76.654	Colobus_angolensis_palliatus
ENSMUSG00000024436	Mrps18b	100	86.667	ENSCGRG00001018086	Mrps18b	100	85.490	Cricetulus_griseus_chok1gshd
ENSMUSG00000024436	Mrps18b	100	86.667	ENSCGRG00000013676	Mrps18b	100	85.490	Cricetulus_griseus_crigri
ENSMUSG00000024436	Mrps18b	78	46.465	ENSCSEG00000018717	mrps18b	81	46.465	Cynoglossus_semilaevis
ENSMUSG00000024436	Mrps18b	72	51.087	ENSCVAG00000004836	mrps18b	73	51.087	Cyprinodon_variegatus
ENSMUSG00000024436	Mrps18b	85	46.544	ENSDARG00000007065	mrps18b	91	46.364	Danio_rerio
ENSMUSG00000024436	Mrps18b	93	75.527	ENSDNOG00000032393	MRPS18B	86	75.546	Dasypus_novemcinctus
ENSMUSG00000024436	Mrps18b	59	44.872	FBgn0032849	mRpS18B	75	44.872	Drosophila_melanogaster
ENSMUSG00000024436	Mrps18b	100	65.759	ENSETEG00000003113	MRPS18B	99	64.453	Echinops_telfairi
ENSMUSG00000024436	Mrps18b	83	42.922	ENSEBUG00000003724	mrps18b	81	42.922	Eptatretus_burgeri
ENSMUSG00000024436	Mrps18b	100	79.377	ENSEASG00005018922	MRPS18B	99	79.377	Equus_asinus_asinus
ENSMUSG00000024436	Mrps18b	100	78.599	ENSECAG00000022485	MRPS18B	99	78.599	Equus_caballus
ENSMUSG00000024436	Mrps18b	96	74.390	ENSEEUG00000010352	MRPS18B	99	73.047	Erinaceus_europaeus
ENSMUSG00000024436	Mrps18b	76	48.969	ENSELUG00000023727	mrps18b	78	48.969	Esox_lucius
ENSMUSG00000024436	Mrps18b	94	79.498	ENSFCAG00000007686	MRPS18B	99	76.654	Felis_catus
ENSMUSG00000024436	Mrps18b	94	77.686	ENSFDAG00000012231	MRPS18B	94	78.603	Fukomys_damarensis
ENSMUSG00000024436	Mrps18b	69	52.874	ENSFHEG00000017861	mrps18b	70	52.874	Fundulus_heteroclitus
ENSMUSG00000024436	Mrps18b	76	51.295	ENSGMOG00000013271	mrps18b	100	51.295	Gadus_morhua
ENSMUSG00000024436	Mrps18b	87	46.025	ENSGACG00000001379	mrps18b	98	46.444	Gasterosteus_aculeatus
ENSMUSG00000024436	Mrps18b	85	42.361	ENSGAGG00000022741	-	65	43.077	Gopherus_agassizii
ENSMUSG00000024436	Mrps18b	100	70.039	ENSGGOG00000011317	MRPS18B	99	70.039	Gorilla_gorilla
ENSMUSG00000024436	Mrps18b	85	47.685	ENSHBUG00000008445	mrps18b	85	47.685	Haplochromis_burtoni
ENSMUSG00000024436	Mrps18b	98	76.800	ENSHGLG00000019371	MRPS18B	99	76.800	Heterocephalus_glaber_female
ENSMUSG00000024436	Mrps18b	98	76.800	ENSHGLG00100010530	MRPS18B	96	76.800	Heterocephalus_glaber_male
ENSMUSG00000024436	Mrps18b	78	52.000	ENSHCOG00000007012	mrps18b	81	52.000	Hippocampus_comes
ENSMUSG00000024436	Mrps18b	83	49.765	ENSIPUG00000013958	mrps18b	70	56.725	Ictalurus_punctatus
ENSMUSG00000024436	Mrps18b	88	82.667	ENSSTOG00000011853	MRPS18B	97	82.667	Ictidomys_tridecemlineatus
ENSMUSG00000024436	Mrps18b	100	80.000	ENSJJAG00000003794	Mrps18b	99	80.000	Jaculus_jaculus
ENSMUSG00000024436	Mrps18b	77	48.223	ENSKMAG00000003449	mrps18b	74	48.731	Kryptolebias_marmoratus
ENSMUSG00000024436	Mrps18b	73	45.455	ENSLBEG00000012943	mrps18b	77	45.455	Labrus_bergylta
ENSMUSG00000024436	Mrps18b	82	57.692	ENSLACG00000004722	MRPS18B	83	57.843	Latimeria_chalumnae
ENSMUSG00000024436	Mrps18b	100	76.357	ENSLAFG00000017285	MRPS18B	100	76.357	Loxodonta_africana
ENSMUSG00000024436	Mrps18b	100	76.654	ENSMFAG00000003966	MRPS18B	99	76.654	Macaca_fascicularis
ENSMUSG00000024436	Mrps18b	100	76.654	ENSMMUG00000006525	MRPS18B	99	76.654	Macaca_mulatta
ENSMUSG00000024436	Mrps18b	100	76.265	ENSMNEG00000045059	MRPS18B	99	76.265	Macaca_nemestrina
ENSMUSG00000024436	Mrps18b	100	71.206	ENSMLEG00000033833	MRPS18B	99	71.206	Mandrillus_leucophaeus
ENSMUSG00000024436	Mrps18b	78	49.246	ENSMAMG00000020243	mrps18b	83	49.246	Mastacembelus_armatus
ENSMUSG00000024436	Mrps18b	85	47.685	ENSMZEG00005017910	mrps18b	85	47.685	Maylandia_zebra
ENSMUSG00000024436	Mrps18b	56	46.853	ENSMZEG00005019697	-	67	46.853	Maylandia_zebra
ENSMUSG00000024436	Mrps18b	100	88.272	ENSMAUG00000019160	Mrps18b	100	88.272	Mesocricetus_auratus
ENSMUSG00000024436	Mrps18b	100	78.125	ENSMICG00000031536	MRPS18B	99	78.125	Microcebus_murinus
ENSMUSG00000024436	Mrps18b	91	89.177	ENSMOCG00000013273	Mrps18b	100	87.421	Microtus_ochrogaster
ENSMUSG00000024436	Mrps18b	77	49.231	ENSMMOG00000012076	mrps18b	82	49.231	Mola_mola
ENSMUSG00000024436	Mrps18b	83	75.829	ENSMODG00000015933	MRPS18B	95	70.306	Monodelphis_domestica
ENSMUSG00000024436	Mrps18b	83	48.113	ENSMALG00000019456	mrps18b	82	48.113	Monopterus_albus
ENSMUSG00000024436	Mrps18b	100	100.000	MGP_CAROLIEiJ_G0021541	Mrps18b	100	100.000	Mus_caroli
ENSMUSG00000024436	Mrps18b	100	95.276	MGP_PahariEiJ_G0020535	Mrps18b	100	95.276	Mus_pahari
ENSMUSG00000024436	Mrps18b	100	100.000	MGP_SPRETEiJ_G0022448	Mrps18b	100	100.000	Mus_spretus
ENSMUSG00000024436	Mrps18b	100	77.821	ENSMPUG00000011739	MRPS18B	99	77.821	Mustela_putorius_furo
ENSMUSG00000024436	Mrps18b	99	78.824	ENSMLUG00000008850	MRPS18B	99	78.824	Myotis_lucifugus
ENSMUSG00000024436	Mrps18b	94	84.583	ENSNGAG00000017874	Mrps18b	99	84.583	Nannospalax_galili
ENSMUSG00000024436	Mrps18b	64	41.975	ENSNBRG00000020716	-	88	41.975	Neolamprologus_brichardi
ENSMUSG00000024436	Mrps18b	100	77.821	ENSNLEG00000005224	MRPS18B	99	77.821	Nomascus_leucogenys
ENSMUSG00000024436	Mrps18b	83	75.355	ENSMEUG00000012457	MRPS18B	95	72.052	Notamacropus_eugenii
ENSMUSG00000024436	Mrps18b	80	87.692	ENSODEG00000017923	-	84	78.676	Octodon_degus
ENSMUSG00000024436	Mrps18b	80	50.490	ENSONIG00000015945	mrps18b	85	48.611	Oreochromis_niloticus
ENSMUSG00000024436	Mrps18b	88	80.973	ENSOCUG00000002149	MRPS18B	99	77.432	Oryctolagus_cuniculus
ENSMUSG00000024436	Mrps18b	78	51.256	ENSORLG00000010546	mrps18b	78	54.598	Oryzias_latipes
ENSMUSG00000024436	Mrps18b	78	51.759	ENSORLG00020018506	mrps18b	84	51.759	Oryzias_latipes_hni
ENSMUSG00000024436	Mrps18b	78	51.759	ENSORLG00015010248	mrps18b	73	55.172	Oryzias_latipes_hsok
ENSMUSG00000024436	Mrps18b	69	54.598	ENSOMEG00000008194	mrps18b	74	54.598	Oryzias_melastigma
ENSMUSG00000024436	Mrps18b	100	75.875	ENSOGAG00000004435	MRPS18B	100	75.875	Otolemur_garnettii
ENSMUSG00000024436	Mrps18b	100	78.988	ENSOARG00000012647	MRPS18B	99	78.988	Ovis_aries
ENSMUSG00000024436	Mrps18b	100	77.043	ENSPPAG00000018246	-	99	77.043	Pan_paniscus
ENSMUSG00000024436	Mrps18b	100	78.210	ENSPPAG00000039692	-	99	78.210	Pan_paniscus
ENSMUSG00000024436	Mrps18b	94	79.079	ENSPPRG00000003538	MRPS18B	99	76.265	Panthera_pardus
ENSMUSG00000024436	Mrps18b	94	79.079	ENSPTIG00000016443	MRPS18B	99	76.265	Panthera_tigris_altaica
ENSMUSG00000024436	Mrps18b	100	78.210	ENSPTRG00000017932	MRPS18B	99	78.210	Pan_troglodytes
ENSMUSG00000024436	Mrps18b	100	75.875	ENSPANG00000017647	MRPS18B	99	75.875	Papio_anubis
ENSMUSG00000024436	Mrps18b	77	48.980	ENSPKIG00000011007	mrps18b	79	48.980	Paramormyrops_kingsleyae
ENSMUSG00000024436	Mrps18b	72	61.538	ENSPSIG00000011533	MRPS18B	94	52.889	Pelodiscus_sinensis
ENSMUSG00000024436	Mrps18b	87	44.856	ENSPMGG00000020546	mrps18b	99	44.856	Periophthalmus_magnuspinnatus
ENSMUSG00000024436	Mrps18b	100	88.583	ENSPEMG00000001695	Mrps18b	99	90.987	Peromyscus_maniculatus_bairdii
ENSMUSG00000024436	Mrps18b	85	49.776	ENSPMAG00000001665	mrps18b	93	50.226	Petromyzon_marinus
ENSMUSG00000024436	Mrps18b	93	69.198	ENSPCIG00000014983	MRPS18B	84	69.869	Phascolarctos_cinereus
ENSMUSG00000024436	Mrps18b	69	52.299	ENSPFOG00000016437	mrps18b	62	52.299	Poecilia_formosa
ENSMUSG00000024436	Mrps18b	69	53.448	ENSPLAG00000002566	mrps18b	71	53.448	Poecilia_latipinna
ENSMUSG00000024436	Mrps18b	69	52.299	ENSPMEG00000010978	mrps18b	61	52.299	Poecilia_mexicana
ENSMUSG00000024436	Mrps18b	74	49.733	ENSPREG00000012186	mrps18b	70	49.733	Poecilia_reticulata
ENSMUSG00000024436	Mrps18b	100	70.039	ENSPPYG00000016412	MRPS18B	99	70.039	Pongo_abelii
ENSMUSG00000024436	Mrps18b	100	76.265	ENSPCAG00000017028	MRPS18B	99	76.265	Procavia_capensis
ENSMUSG00000024436	Mrps18b	98	69.200	ENSPCOG00000015431	MRPS18B	99	69.200	Propithecus_coquereli
ENSMUSG00000024436	Mrps18b	100	76.562	ENSPVAG00000003981	MRPS18B	99	76.863	Pteropus_vampyrus
ENSMUSG00000024436	Mrps18b	50	46.512	ENSPNYG00000004553	-	69	46.512	Pundamilia_nyererei
ENSMUSG00000024436	Mrps18b	85	47.685	ENSPNYG00000011383	mrps18b	86	47.685	Pundamilia_nyererei
ENSMUSG00000024436	Mrps18b	70	54.802	ENSPNAG00000029858	mrps18b	73	54.802	Pygocentrus_nattereri
ENSMUSG00000024436	Mrps18b	100	91.732	ENSRNOG00000000804	Mrps18b	98	91.732	Rattus_norvegicus
ENSMUSG00000024436	Mrps18b	100	77.043	ENSRBIG00000037128	MRPS18B	99	77.043	Rhinopithecus_bieti
ENSMUSG00000024436	Mrps18b	100	77.043	ENSRROG00000017497	MRPS18B	99	77.043	Rhinopithecus_roxellana
ENSMUSG00000024436	Mrps18b	96	79.184	ENSSBOG00000023414	MRPS18B	100	77.016	Saimiri_boliviensis_boliviensis
ENSMUSG00000024436	Mrps18b	87	68.919	ENSSHAG00000006769	MRPS18B	90	67.982	Sarcophilus_harrisii
ENSMUSG00000024436	Mrps18b	69	54.237	ENSSFOG00015015664	mrps18b	77	52.432	Scleropages_formosus
ENSMUSG00000024436	Mrps18b	70	55.367	ENSSMAG00000020784	mrps18b	72	55.367	Scophthalmus_maximus
ENSMUSG00000024436	Mrps18b	81	48.182	ENSSDUG00000009519	mrps18b	97	46.552	Seriola_dumerili
ENSMUSG00000024436	Mrps18b	60	56.579	ENSSLDG00000000473	mrps18b	55	56.863	Seriola_lalandi_dorsalis
ENSMUSG00000024436	Mrps18b	72	60.989	ENSSPUG00000015230	MRPS18B	72	61.111	Sphenodon_punctatus
ENSMUSG00000024436	Mrps18b	69	54.545	ENSSPAG00000004508	mrps18b	82	49.749	Stegastes_partitus
ENSMUSG00000024436	Mrps18b	100	77.432	ENSSSCG00000029425	MRPS18B	99	77.432	Sus_scrofa
ENSMUSG00000024436	Mrps18b	86	44.444	ENSTRUG00000022309	mrps18b	79	44.444	Takifugu_rubripes
ENSMUSG00000024436	Mrps18b	100	77.821	ENSTTRG00000008313	MRPS18B	99	77.821	Tursiops_truncatus
ENSMUSG00000024436	Mrps18b	100	77.821	ENSUAMG00000005833	MRPS18B	99	77.821	Ursus_americanus
ENSMUSG00000024436	Mrps18b	100	77.821	ENSUMAG00000019652	MRPS18B	76	77.821	Ursus_maritimus
ENSMUSG00000024436	Mrps18b	75	76.166	ENSVPAG00000001181	MRPS18B	100	76.166	Vicugna_pacos
ENSMUSG00000024436	Mrps18b	93	81.172	ENSVVUG00000009631	MRPS18B	99	78.516	Vulpes_vulpes
ENSMUSG00000024436	Mrps18b	80	50.990	ENSXETG00000032503	MRPS18B	89	50.990	Xenopus_tropicalis
ENSMUSG00000024436	Mrps18b	73	50.538	ENSXCOG00000003011	mrps18b	92	50.538	Xiphophorus_couchianus
ENSMUSG00000024436	Mrps18b	73	50.000	ENSXMAG00000016698	mrps18b	76	50.000	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	11402041.	ISS	Function
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005763	mitochondrial small ribosomal subunit	-	ISO	Component
GO:0005763	mitochondrial small ribosomal subunit	11402041.	ISS	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0030054	cell junction	-	ISO	Component
GO:0032543	mitochondrial translation	11402041.	ISS	Process