EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024498 (Gene tree)
Gene ID: 56070
Gene Symbol: Tcerg1
Alias: 2410022J09Rik|2900090C16Rik|Fbp28|Taf2s|ca150|p144
Full Name: transcription elongation regulator 1 (CA150)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 64042
Position: chr18: 42511510-42575551
Accession: 1926421
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000025375	-	4152	XM_006526110	ENSMUSP00000025375	1100 (aa)	XP_006526173	Q8CGF7
ENSMUST00000173642	-	3526	-	ENSMUSP00000134458	1034 (aa)	-	Q8CGF7

Gene Model

Click here to download ENSMUSG00000024498's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024498's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024498	Tcerg1	100	97.636	ENSG00000113649	TCERG1	100	97.636	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0001103	RNA polymerase II repressing transcription factor binding	-	ISO	Function
GO:0003700	DNA-binding transcription factor activity	10578054.	ISS	Function
GO:0003714	transcription corepressor activity	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0006351	transcription, DNA-templated	10578054.	ISS	Process
GO:0016363	nuclear matrix	10578054.	ISS	Component
GO:0042802	identical protein binding	-	ISO	Function
GO:0070064	proline-rich region binding	17915251.	IDA	Function