EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024576 (Gene tree)
Gene ID: 93687
Gene Symbol: Csnk1a1
Alias: 2610208K14Rik|4632404G05Rik|5430427P18Rik|CK1a
Full Name: casein kinase 1%2C alpha 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 34788
Position: chr18: 61555274-61590061
Accession: 1934950
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000170482	-	2895	-	-	- (aa)	-	-
ENSMUST00000115246	-	1484	XM_006526383	ENSMUSP00000110901	334 (aa)	XP_006526446	H7BXB1
ENSMUST00000165123	-	4083	-	ENSMUSP00000128871	325 (aa)	-	Q8BK63
ENSMUST00000167187	-	1222	XM_006526387	ENSMUSP00000127463	353 (aa)	XP_006526450	E9Q2U6
ENSMUST00000163205	-	3204	-	ENSMUSP00000127144	336 (aa)	-	E9Q4G7
ENSMUST00000165381	-	2275	-	-	- (aa)	-	-
ENSMUST00000166990	-	1860	-	ENSMUSP00000131687	374 (aa)	-	E9PWB2
ENSMUST00000164253	-	526	-	ENSMUSP00000129295	159 (aa)	-	F6YBC9
ENSMUST00000165721	-	2323	XM_006526388	ENSMUSP00000132083	337 (aa)	XP_006526451	Q8BK63
ENSMUST00000170862	-	2259	XM_006526384	ENSMUSP00000127265	365 (aa)	XP_006526447	E9Q3W1

Gene Model

Click here to download ENSMUSG00000024576's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04310	Wnt signaling pathway	KEGG
mmu04340	Hedgehog signaling pathway	KEGG
mmu05165	Human papillomavirus infection	KEGG
mmu05224	Breast cancer	KEGG
mmu05225	Hepatocellular carcinoma	KEGG
mmu05226	Gastric cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024576's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024576	Csnk1a1	97	86.984	WBGene00002202	kin-19	92	86.984	Caenorhabditis_elegans
ENSMUSG00000024576	Csnk1a1	100	100.000	ENSG00000113712	CSNK1A1	100	100.000	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000287	magnesium ion binding	-	ISO	Function
GO:0000775	chromosome, centromeric region	-	IEA	Component
GO:0000776	kinetochore	-	IEA	Component
GO:0000902	cell morphogenesis	17686994.	IGI	Process
GO:0004672	protein kinase activity	21930935.	IDA	Function
GO:0004674	protein serine/threonine kinase activity	21873635.	IBA	Function
GO:0004674	protein serine/threonine kinase activity	-	ISO	Function
GO:0005524	ATP binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005813	centrosome	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0006468	protein phosphorylation	21930935.	IDA	Process
GO:0006468	protein phosphorylation	-	ISO	Process
GO:0007030	Golgi organization	-	ISO	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0016055	Wnt signaling pathway	21873635.	IBA	Process
GO:0016301	kinase activity	-	IEA	Function
GO:0016310	phosphorylation	-	IEA	Process
GO:0016607	nuclear speck	-	ISO	Component
GO:0016740	transferase activity	-	IEA	Function
GO:0018105	peptidyl-serine phosphorylation	21873635.	IBA	Process
GO:0018105	peptidyl-serine phosphorylation	-	ISO	Process
GO:0018107	peptidyl-threonine phosphorylation	21873635.	IBA	Process
GO:0030877	beta-catenin destruction complex	-	ISO	Component
GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	-	ISO	Process
GO:0036064	ciliary basal body	25644602.	IDA	Component
GO:0042277	peptide binding	-	ISO	Function
GO:0042995	cell projection	-	IEA	Component
GO:0045095	keratin filament	-	ISO	Component
GO:0045104	intermediate filament cytoskeleton organization	-	ISO	Process
GO:0051219	phosphoprotein binding	-	ISO	Function
GO:0051301	cell division	-	IEA	Process
GO:0090090	negative regulation of canonical Wnt signaling pathway	21873635.	IBA	Process
GO:0090090	negative regulation of canonical Wnt signaling pathway	-	ISO	Process
GO:1904424	regulation of GTP binding	-	ISO	Process
GO:1990904	ribonucleoprotein complex	21709260.	IDA	Component