EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024590 (Gene tree)
Gene ID: 16906
Gene Symbol: Lmnb1
Alias: -
Full Name: lamin B1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 45612
Position: chr18: 56707813-56753424
Accession: 96795
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000128651	-	659	-	-	- (aa)	-	-
ENSMUST00000025486	-	2843	-	ENSMUSP00000025486	588 (aa)	-	P14733

Gene Model

Click here to download ENSMUSG00000024590's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04210	Apoptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024590's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024590	Lmnb1	100	95.918	ENSG00000113368	LMNB1	100	95.918	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003690	double-stranded DNA binding	29484800.	IDA	Function
GO:0005198	structural molecule activity	-	IEA	Function
GO:0005634	nucleus	12714744.21503901.21874024.23028340.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005635	nuclear envelope	16364897.19028838.20457914.23166514.	IDA	Component
GO:0005635	nuclear envelope	-	ISO	Component
GO:0005635	nuclear envelope	-	ISO	Component
GO:0005637	nuclear inner membrane	25123547.	IDA	Component
GO:0005638	lamin filament	8032679.	IDA	Component
GO:0005652	nuclear lamina	-	ISO	Component
GO:0005654	nucleoplasm	19028838.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005882	intermediate filament	-	IEA	Component
GO:0008432	JUN kinase binding	19028838.	NAS	Function
GO:0010971	positive regulation of G2/M transition of mitotic cell cycle	19028838.	NAS	Process
GO:0016020	membrane	-	IEA	Component
GO:0016363	nuclear matrix	20153721.	IDA	Component
GO:0016363	nuclear matrix	-	ISO	Component
GO:0031965	nuclear membrane	-	ISO	Component
GO:0043274	phospholipase binding	19028838.	IPI	Function
GO:0046330	positive regulation of JNK cascade	19028838.	NAS	Process
GO:1904609	cellular response to monosodium L-glutamate	-	ISO	Process
GO:1990837	sequence-specific double-stranded DNA binding	23117660.	IDA	Function