EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024800 (Gene tree)
Gene ID: 54364
Gene Symbol: Rpp30
Alias: Rnasep2|TSG15
Full Name: ribonuclease P/MRP 30 subunit
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 21057 bases
Position: chr19:36083716-36104772
Accession: 1859683
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000025714	RNase_P_p30	PF01876.16	6.3e-62	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000025714	-	1155	-	ENSMUSP00000025714	268 (aa)	-	O88796

Gene Model

Click here to download ENSMUSG00000024800's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03008	Ribosome biogenesis in eukaryotes	KEGG
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024800's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024800	Rpp30	100	90.299	ENSG00000148688	RPP30	100	90.299	Homo_sapiens
ENSMUSG00000024800	Rpp30	88	58.051	ENSAPOG00000023156	rpp30	94	52.899	Acanthochromis_polyacanthus
ENSMUSG00000024800	Rpp30	100	91.791	ENSAMEG00000016776	RPP30	100	91.791	Ailuropoda_melanoleuca
ENSMUSG00000024800	Rpp30	87	56.652	ENSACIG00000022810	rpp30	89	51.502	Amphilophus_citrinellus
ENSMUSG00000024800	Rpp30	99	55.056	ENSAOCG00000016438	rpp30	89	55.056	Amphiprion_ocellaris
ENSMUSG00000024800	Rpp30	99	55.056	ENSAPEG00000008697	rpp30	89	55.056	Amphiprion_percula
ENSMUSG00000024800	Rpp30	96	56.977	ENSATEG00000015263	rpp30	93	56.977	Anabas_testudineus
ENSMUSG00000024800	Rpp30	90	71.784	ENSAPLG00000009959	RPP30	100	71.784	Anas_platyrhynchos
ENSMUSG00000024800	Rpp30	99	70.566	ENSACAG00000007996	RPP30	99	70.566	Anolis_carolinensis
ENSMUSG00000024800	Rpp30	99	78.113	ENSANAG00000009439	RPP30	83	78.113	Aotus_nancymaae
ENSMUSG00000024800	Rpp30	99	52.985	ENSACLG00000015389	-	99	52.985	Astatotilapia_calliptera
ENSMUSG00000024800	Rpp30	99	57.836	ENSAMXG00000040653	rpp30	98	57.836	Astyanax_mexicanus
ENSMUSG00000024800	Rpp30	100	90.672	ENSBTAG00000002973	RPP30	100	90.672	Bos_taurus
ENSMUSG00000024800	Rpp30	100	88.060	ENSCJAG00000011045	RPP30	100	88.060	Callithrix_jacchus
ENSMUSG00000024800	Rpp30	100	89.925	ENSCAFG00000031801	RPP30	100	89.925	Canis_familiaris
ENSMUSG00000024800	Rpp30	100	89.925	ENSCAFG00020000258	RPP30	100	89.925	Canis_lupus_dingo
ENSMUSG00000024800	Rpp30	100	87.687	ENSCHIG00000012901	RPP30	100	87.687	Capra_hircus
ENSMUSG00000024800	Rpp30	100	90.672	ENSTSYG00000013903	RPP30	100	90.672	Carlito_syrichta
ENSMUSG00000024800	Rpp30	90	70.833	ENSCAPG00000001326	RPP30	100	70.833	Cavia_aperea
ENSMUSG00000024800	Rpp30	100	90.672	ENSCPOG00000033174	RPP30	100	90.672	Cavia_porcellus
ENSMUSG00000024800	Rpp30	100	89.925	ENSCCAG00000029514	RPP30	100	89.925	Cebus_capucinus
ENSMUSG00000024800	Rpp30	99	90.189	ENSCATG00000042072	RPP30	99	90.189	Cercocebus_atys
ENSMUSG00000024800	Rpp30	100	92.537	ENSCLAG00000008595	RPP30	100	92.537	Chinchilla_lanigera
ENSMUSG00000024800	Rpp30	100	90.299	ENSCSAG00000006694	RPP30	100	90.299	Chlorocebus_sabaeus
ENSMUSG00000024800	Rpp30	87	51.172	ENSCHOG00000007023	-	100	51.172	Choloepus_hoffmanni
ENSMUSG00000024800	Rpp30	99	75.188	ENSCPBG00000026518	RPP30	99	75.188	Chrysemys_picta_bellii
ENSMUSG00000024800	Rpp30	87	42.562	ENSCING00000019714	-	89	41.736	Ciona_intestinalis
ENSMUSG00000024800	Rpp30	87	40.323	ENSCSAVG00000011282	-	80	40.323	Ciona_savignyi
ENSMUSG00000024800	Rpp30	100	90.299	ENSCANG00000041084	RPP30	100	90.299	Colobus_angolensis_palliatus
ENSMUSG00000024800	Rpp30	100	79.478	ENSCGRG00001000834	-	100	79.478	Cricetulus_griseus_chok1gshd
ENSMUSG00000024800	Rpp30	87	96.552	ENSCGRG00001017068	-	97	96.552	Cricetulus_griseus_chok1gshd
ENSMUSG00000024800	Rpp30	100	95.522	ENSCGRG00000002508	-	100	95.522	Cricetulus_griseus_crigri
ENSMUSG00000024800	Rpp30	100	79.851	ENSCGRG00000006196	-	100	79.851	Cricetulus_griseus_crigri
ENSMUSG00000024800	Rpp30	99	51.648	ENSCSEG00000001779	rpp30	93	51.648	Cynoglossus_semilaevis
ENSMUSG00000024800	Rpp30	92	60.081	ENSCVAG00000003139	rpp30	95	58.140	Cyprinodon_variegatus
ENSMUSG00000024800	Rpp30	99	59.176	ENSDARG00000027428	rpp30	99	59.176	Danio_rerio
ENSMUSG00000024800	Rpp30	100	90.672	ENSDNOG00000010186	RPP30	92	90.672	Dasypus_novemcinctus
ENSMUSG00000024800	Rpp30	100	91.418	ENSDORG00000015333	Rpp30	100	91.418	Dipodomys_ordii
ENSMUSG00000024800	Rpp30	87	35.685	FBgn0283652	Rpp30	78	35.685	Drosophila_melanogaster
ENSMUSG00000024800	Rpp30	100	88.060	ENSETEG00000018823	RPP30	100	88.060	Echinops_telfairi
ENSMUSG00000024800	Rpp30	56	39.216	ENSEBUG00000003989	-	83	39.216	Eptatretus_burgeri
ENSMUSG00000024800	Rpp30	99	90.637	ENSEASG00005011050	RPP30	99	90.637	Equus_asinus_asinus
ENSMUSG00000024800	Rpp30	99	90.637	ENSECAG00000021917	RPP30	99	90.637	Equus_caballus
ENSMUSG00000024800	Rpp30	97	63.602	ENSEEUG00000009986	-	99	63.602	Erinaceus_europaeus
ENSMUSG00000024800	Rpp30	99	66.912	ENSELUG00000003731	rpp30	95	66.912	Esox_lucius
ENSMUSG00000024800	Rpp30	100	91.791	ENSFCAG00000029073	RPP30	93	91.791	Felis_catus
ENSMUSG00000024800	Rpp30	99	71.536	ENSFALG00000007711	RPP30	99	71.536	Ficedula_albicollis
ENSMUSG00000024800	Rpp30	100	91.045	ENSFDAG00000019241	RPP30	100	91.045	Fukomys_damarensis
ENSMUSG00000024800	Rpp30	93	55.422	ENSFHEG00000014739	rpp30	97	53.909	Fundulus_heteroclitus
ENSMUSG00000024800	Rpp30	91	54.762	ENSGMOG00000005379	rpp30	100	54.762	Gadus_morhua
ENSMUSG00000024800	Rpp30	100	70.896	ENSGALG00000006486	RPP30	99	70.968	Gallus_gallus
ENSMUSG00000024800	Rpp30	95	54.902	ENSGAFG00000001445	rpp30	94	54.902	Gambusia_affinis
ENSMUSG00000024800	Rpp30	99	53.957	ENSGACG00000010285	rpp30	99	53.957	Gasterosteus_aculeatus
ENSMUSG00000024800	Rpp30	99	72.932	ENSGAGG00000000980	RPP30	69	72.932	Gopherus_agassizii
ENSMUSG00000024800	Rpp30	100	90.299	ENSGGOG00000026917	RPP30	100	90.299	Gorilla_gorilla
ENSMUSG00000024800	Rpp30	99	52.985	ENSHBUG00000019332	rpp30	99	52.985	Haplochromis_burtoni
ENSMUSG00000024800	Rpp30	100	91.791	ENSHGLG00000013072	RPP30	100	91.791	Heterocephalus_glaber_female
ENSMUSG00000024800	Rpp30	100	91.791	ENSHGLG00100017798	RPP30	100	91.791	Heterocephalus_glaber_male
ENSMUSG00000024800	Rpp30	94	51.938	ENSHCOG00000004763	-	90	51.938	Hippocampus_comes
ENSMUSG00000024800	Rpp30	99	58.672	ENSIPUG00000003863	rpp30	99	58.672	Ictalurus_punctatus
ENSMUSG00000024800	Rpp30	100	90.672	ENSSTOG00000027002	RPP30	100	90.672	Ictidomys_tridecemlineatus
ENSMUSG00000024800	Rpp30	100	92.537	ENSJJAG00000020041	Rpp30	100	92.537	Jaculus_jaculus
ENSMUSG00000024800	Rpp30	99	54.478	ENSKMAG00000015355	rpp30	99	54.478	Kryptolebias_marmoratus
ENSMUSG00000024800	Rpp30	99	54.982	ENSLBEG00000019989	rpp30	99	54.982	Labrus_bergylta
ENSMUSG00000024800	Rpp30	72	60.274	ENSLACG00000002534	RPP30	96	60.274	Latimeria_chalumnae
ENSMUSG00000024800	Rpp30	99	63.806	ENSLOCG00000000031	rpp30	99	63.806	Lepisosteus_oculatus
ENSMUSG00000024800	Rpp30	100	90.299	ENSLAFG00000015931	RPP30	100	90.299	Loxodonta_africana
ENSMUSG00000024800	Rpp30	100	90.299	ENSMFAG00000031109	RPP30	100	90.299	Macaca_fascicularis
ENSMUSG00000024800	Rpp30	100	90.299	ENSMMUG00000006628	RPP30	100	90.299	Macaca_mulatta
ENSMUSG00000024800	Rpp30	100	89.925	ENSMNEG00000033838	RPP30	100	89.925	Macaca_nemestrina
ENSMUSG00000024800	Rpp30	100	90.299	ENSMLEG00000037578	RPP30	100	90.299	Mandrillus_leucophaeus
ENSMUSG00000024800	Rpp30	99	55.351	ENSMAMG00000010934	rpp30	99	55.351	Mastacembelus_armatus
ENSMUSG00000024800	Rpp30	99	52.985	ENSMZEG00005018508	-	99	52.985	Maylandia_zebra
ENSMUSG00000024800	Rpp30	100	66.791	ENSMGAG00000008452	RPP30	100	67.164	Meleagris_gallopavo
ENSMUSG00000024800	Rpp30	100	94.403	ENSMAUG00000008797	Rpp30	100	94.403	Mesocricetus_auratus
ENSMUSG00000024800	Rpp30	100	91.418	ENSMICG00000012019	RPP30	100	91.418	Microcebus_murinus
ENSMUSG00000024800	Rpp30	100	92.910	ENSMOCG00000016872	Rpp30	100	92.910	Microtus_ochrogaster
ENSMUSG00000024800	Rpp30	97	51.923	ENSMMOG00000009266	rpp30	95	51.923	Mola_mola
ENSMUSG00000024800	Rpp30	99	82.397	ENSMODG00000006863	-	99	82.397	Monodelphis_domestica
ENSMUSG00000024800	Rpp30	99	69.663	ENSMODG00000009342	-	99	69.663	Monodelphis_domestica
ENSMUSG00000024800	Rpp30	98	55.513	ENSMALG00000011718	rpp30	96	55.513	Monopterus_albus
ENSMUSG00000024800	Rpp30	99	99.251	MGP_CAROLIEiJ_G0022902	Rpp30	99	99.251	Mus_caroli
ENSMUSG00000024800	Rpp30	100	97.761	MGP_PahariEiJ_G0014397	Rpp30	100	97.761	Mus_pahari
ENSMUSG00000024800	Rpp30	100	99.627	MGP_SPRETEiJ_G0023821	Rpp30	100	99.627	Mus_spretus
ENSMUSG00000024800	Rpp30	99	91.698	ENSMPUG00000017258	RPP30	93	91.698	Mustela_putorius_furo
ENSMUSG00000024800	Rpp30	99	90.637	ENSMLUG00000017169	RPP30	99	90.637	Myotis_lucifugus
ENSMUSG00000024800	Rpp30	100	74.627	ENSNGAG00000014392	-	100	74.627	Nannospalax_galili
ENSMUSG00000024800	Rpp30	100	92.537	ENSNGAG00000012018	-	100	92.537	Nannospalax_galili
ENSMUSG00000024800	Rpp30	92	47.581	ENSNBRG00000024170	-	92	47.581	Neolamprologus_brichardi
ENSMUSG00000024800	Rpp30	100	90.672	ENSNLEG00000012383	RPP30	100	90.672	Nomascus_leucogenys
ENSMUSG00000024800	Rpp30	99	72.325	ENSMEUG00000015587	-	100	72.325	Notamacropus_eugenii
ENSMUSG00000024800	Rpp30	53	93.662	ENSOPRG00000007367	-	100	93.662	Ochotona_princeps
ENSMUSG00000024800	Rpp30	98	92.776	ENSODEG00000004530	-	100	92.776	Octodon_degus
ENSMUSG00000024800	Rpp30	100	68.657	ENSODEG00000004560	-	100	68.657	Octodon_degus
ENSMUSG00000024800	Rpp30	77	54.589	ENSONIG00000019140	rpp30	100	54.589	Oreochromis_niloticus
ENSMUSG00000024800	Rpp30	99	80.150	ENSOANG00000003415	RPP30	99	80.150	Ornithorhynchus_anatinus
ENSMUSG00000024800	Rpp30	100	88.806	ENSOCUG00000006896	RPP30	92	88.806	Oryctolagus_cuniculus
ENSMUSG00000024800	Rpp30	95	55.512	ENSORLG00000020420	rpp30	87	55.512	Oryzias_latipes
ENSMUSG00000024800	Rpp30	99	54.478	ENSORLG00020009037	-	99	54.478	Oryzias_latipes_hni
ENSMUSG00000024800	Rpp30	99	54.478	ENSORLG00015008300	rpp30	93	54.478	Oryzias_latipes_hsok
ENSMUSG00000024800	Rpp30	68	52.717	ENSOMEG00000012640	-	98	52.717	Oryzias_melastigma
ENSMUSG00000024800	Rpp30	100	90.299	ENSOGAG00000013963	RPP30	100	90.299	Otolemur_garnettii
ENSMUSG00000024800	Rpp30	98	83.588	ENSOARG00000015789	RPP30	98	83.588	Ovis_aries
ENSMUSG00000024800	Rpp30	100	90.299	ENSPPAG00000043779	RPP30	100	90.299	Pan_paniscus
ENSMUSG00000024800	Rpp30	100	92.164	ENSPPRG00000000115	RPP30	100	92.164	Panthera_pardus
ENSMUSG00000024800	Rpp30	100	92.164	ENSPTIG00000014949	RPP30	100	92.164	Panthera_tigris_altaica
ENSMUSG00000024800	Rpp30	99	90.189	ENSPTRG00000002742	RPP30	100	86.940	Pan_troglodytes
ENSMUSG00000024800	Rpp30	100	90.299	ENSPANG00000021710	RPP30	100	90.299	Papio_anubis
ENSMUSG00000024800	Rpp30	53	47.222	ENSPKIG00000024858	rpp30	76	47.222	Paramormyrops_kingsleyae
ENSMUSG00000024800	Rpp30	90	75.309	ENSPSIG00000013213	RPP30	99	75.309	Pelodiscus_sinensis
ENSMUSG00000024800	Rpp30	87	44.828	ENSPMGG00000014872	rpp30	93	44.828	Periophthalmus_magnuspinnatus
ENSMUSG00000024800	Rpp30	100	76.866	ENSPEMG00000001948	Rpp30	100	76.866	Peromyscus_maniculatus_bairdii
ENSMUSG00000024800	Rpp30	53	43.293	ENSPMAG00000001855	-	99	43.293	Petromyzon_marinus
ENSMUSG00000024800	Rpp30	99	82.022	ENSPCIG00000015730	RPP30	99	82.022	Phascolarctos_cinereus
ENSMUSG00000024800	Rpp30	91	56.735	ENSPFOG00000000610	rpp30	91	56.735	Poecilia_formosa
ENSMUSG00000024800	Rpp30	91	56.557	ENSPLAG00000003728	rpp30	85	56.557	Poecilia_latipinna
ENSMUSG00000024800	Rpp30	91	55.510	ENSPMEG00000015692	rpp30	91	55.510	Poecilia_mexicana
ENSMUSG00000024800	Rpp30	91	56.327	ENSPREG00000001536	rpp30	91	56.327	Poecilia_reticulata
ENSMUSG00000024800	Rpp30	100	90.299	ENSPPYG00000002473	RPP30	100	90.299	Pongo_abelii
ENSMUSG00000024800	Rpp30	99	59.441	ENSPCAG00000016930	RPP30	100	59.441	Procavia_capensis
ENSMUSG00000024800	Rpp30	100	91.418	ENSPCOG00000017865	RPP30	100	91.418	Propithecus_coquereli
ENSMUSG00000024800	Rpp30	99	83.045	ENSPVAG00000010524	RPP30	94	83.045	Pteropus_vampyrus
ENSMUSG00000024800	Rpp30	93	46.215	ENSPNYG00000016930	-	85	46.215	Pundamilia_nyererei
ENSMUSG00000024800	Rpp30	99	61.567	ENSPNAG00000014804	rpp30	99	61.567	Pygocentrus_nattereri
ENSMUSG00000024800	Rpp30	100	96.642	ENSRNOG00000018718	Rpp30	100	96.642	Rattus_norvegicus
ENSMUSG00000024800	Rpp30	99	86.038	ENSRBIG00000036948	RPP30	85	86.038	Rhinopithecus_bieti
ENSMUSG00000024800	Rpp30	99	71.269	ENSSBOG00000025405	RPP30	89	71.269	Saimiri_boliviensis_boliviensis
ENSMUSG00000024800	Rpp30	100	81.111	ENSSHAG00000007452	RPP30	100	81.111	Sarcophilus_harrisii
ENSMUSG00000024800	Rpp30	100	63.197	ENSSFOG00015012510	rpp30	99	63.197	Scleropages_formosus
ENSMUSG00000024800	Rpp30	99	55.639	ENSSMAG00000013854	rpp30	95	55.639	Scophthalmus_maximus
ENSMUSG00000024800	Rpp30	97	56.923	ENSSDUG00000015086	rpp30	93	56.923	Seriola_dumerili
ENSMUSG00000024800	Rpp30	88	52.500	ENSSLDG00000021234	rpp30	94	52.500	Seriola_lalandi_dorsalis
ENSMUSG00000024800	Rpp30	100	89.179	ENSSARG00000007110	RPP30	100	89.179	Sorex_araneus
ENSMUSG00000024800	Rpp30	85	66.522	ENSSPUG00000000595	RPP30	99	66.522	Sphenodon_punctatus
ENSMUSG00000024800	Rpp30	99	89.139	ENSSSCG00000010460	RPP30	99	89.139	Sus_scrofa
ENSMUSG00000024800	Rpp30	90	72.614	ENSTGUG00000008399	RPP30	96	72.614	Taeniopygia_guttata
ENSMUSG00000024800	Rpp30	53	41.958	ENSTRUG00000020711	-	57	41.958	Takifugu_rubripes
ENSMUSG00000024800	Rpp30	100	54.015	ENSTNIG00000018540	rpp30	96	54.015	Tetraodon_nigroviridis
ENSMUSG00000024800	Rpp30	83	90.090	ENSTBEG00000010734	RPP30	100	90.090	Tupaia_belangeri
ENSMUSG00000024800	Rpp30	89	80.252	ENSTTRG00000014708	RPP30	89	80.252	Tursiops_truncatus
ENSMUSG00000024800	Rpp30	68	91.257	ENSUAMG00000001045	RPP30	90	91.257	Ursus_americanus
ENSMUSG00000024800	Rpp30	100	92.164	ENSUMAG00000000971	RPP30	100	92.164	Ursus_maritimus
ENSMUSG00000024800	Rpp30	99	74.564	ENSVPAG00000002077	RPP30	100	74.564	Vicugna_pacos
ENSMUSG00000024800	Rpp30	100	81.716	ENSVVUG00000021784	RPP30	100	81.716	Vulpes_vulpes
ENSMUSG00000024800	Rpp30	89	71.849	ENSXETG00000021785	rpp30	88	71.849	Xenopus_tropicalis
ENSMUSG00000024800	Rpp30	95	51.765	ENSXCOG00000017864	rpp30	93	51.765	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000172	ribonuclease MRP complex	-	ISO	Component
GO:0001682	tRNA 5'-leader removal	-	ISO	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003824	catalytic activity	-	IEA	Function
GO:0004526	ribonuclease P activity	21873635.	IBA	Function
GO:0004526	ribonuclease P activity	-	ISO	Function
GO:0004540	ribonuclease activity	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005655	nucleolar ribonuclease P complex	21873635.	IBA	Component
GO:0008033	tRNA processing	21873635.	IBA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0030681	multimeric ribonuclease P complex	-	ISO	Component