EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024812 (Gene tree)
Gene ID: 21873
Gene Symbol: Tjp2
Alias: ZO-2
Full Name: tight junction protein 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 130526
Position: chr19: 24094505-24225030
Accession: 1341872
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000233658	-	4920	-	ENSMUSP00000156728	1258 (aa)	-	-
ENSMUST00000232956	-	4728	-	ENSMUSP00000156896	1165 (aa)	-	-
ENSMUST00000233027	-	4668	-	ENSMUSP00000156605	1190 (aa)	-	UPI0001548FF7
ENSMUST00000099558	-	4591	XM_006526904	ENSMUSP00000097154	1167 (aa)	XP_006526967	Q9Z0U1

Gene Model

Click here to download ENSMUSG00000024812's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024812's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024812	Tjp2	100	85.774	ENSG00000119139	TJP2	100	93.284	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	10601346.16650609.22437732.26609154.	IPI	Function
GO:0005634	nucleus	22437732.	IDA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	12060405.12507281.18423437.	IDA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005911	cell-cell junction	26609154.	IDA	Component
GO:0005921	gap junction	-	ISO	Component
GO:0005923	bicellular tight junction	-	ISO	Component
GO:0008022	protein C-terminus binding	-	ISO	Function
GO:0009986	cell surface	-	ISO	Component
GO:0016020	membrane	-	IEA	Component
GO:0019904	protein domain specific binding	-	ISO	Function
GO:0030054	cell junction	12507281.	IDA	Component
GO:0030054	cell junction	-	ISO	Component
GO:0030674	protein binding, bridging	-	ISO	Function
GO:0050892	intestinal absorption	-	ISO	Process
GO:0070160	tight junction	24889144.	IDA	Component
GO:0071847	TNFSF11-mediated signaling pathway	22437732.	IMP	Process
GO:0090557	establishment of endothelial intestinal barrier	-	ISO	Process
GO:0090559	regulation of membrane permeability	-	ISO	Process
GO:2001205	negative regulation of osteoclast development	22437732.	IMP	Process