EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000137465	-	2167	-	-	- (aa)	-	-
ENSMUST00000118623	-	2406	-	ENSMUSP00000113465	405 (aa)	-	D3Z5N6
ENSMUST00000142995	-	725	-	-	- (aa)	-	-
ENSMUST00000129816	-	1115	-	-	- (aa)	-	-
ENSMUST00000154365	-	314	-	-	- (aa)	-	-
ENSMUST00000136983	-	3314	-	ENSMUSP00000120125	391 (aa)	-	Q61103
ENSMUST00000123029	-	735	-	-	- (aa)	-	-
ENSMUST00000155937	-	370	-	-	- (aa)	-	-
ENSMUST00000025746	-	2153	-	ENSMUSP00000025746	214 (aa)	-	F8WIP7

Gene Model

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000123	histone acetyltransferase complex	21873635.	IBA	Component
GO:0000790	nuclear chromatin	21873635.	IBA	Component
GO:0000790	nuclear chromatin	-	ISO	Component
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004402	histone acetyltransferase activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	9680388.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	9680388.	IDA	Component
GO:0005813	centrosome	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0006915	apoptotic process	-	IEA	Process
GO:0007399	nervous system development	21873635.	IBA	Process
GO:0042393	histone binding	21873635.	IBA	Function
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0045892	negative regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0062072	H3K9me3 modified histone binding	-	ISO	Function
GO:0070577	lysine-acetylated histone binding	-	ISO	Function
GO:0071565	nBAF complex	21873635.	IBA	Component
GO:1905454	negative regulation of myeloid progenitor cell differentiation	-	ISO	Process