EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024829 (Gene tree)
Gene ID: 353242
Gene Symbol: Mrpl21
Alias: -
Full Name: mitochondrial ribosomal protein L21
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 9937 bases
Position: chr19:3282901-3292837
Accession: 2660674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000025743	Ribosomal_L21p	PF00829.21	7.7e-23	1	1
ENSMUSP00000025745	Ribosomal_L21p	PF00829.21	8.3e-20	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000139844	-	674	-	-	- (aa)	-	-
ENSMUST00000154785	-	604	-	-	- (aa)	-	-
ENSMUST00000025745	-	1138	-	ENSMUSP00000025745	216 (aa)	-	Q9D1N9
ENSMUST00000141610	-	469	-	ENSMUSP00000120330	53 (aa)	-	D6RJ32
ENSMUST00000155870	-	678	-	-	- (aa)	-	-
ENSMUST00000025743	-	802	XM_006531777	ENSMUSP00000025743	209 (aa)	XP_006531840	Q9D1N9

Gene Model

Click here to download ENSMUSG00000024829's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024829's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024829	Mrpl21	98	80.976	ENSG00000197345	MRPL21	100	83.333	Homo_sapiens
ENSMUSG00000024829	Mrpl21	82	62.791	ENSAPOG00000009928	mrpl21	86	63.158	Acanthochromis_polyacanthus
ENSMUSG00000024829	Mrpl21	99	81.731	ENSAMEG00000008591	MRPL21	94	84.184	Ailuropoda_melanoleuca
ENSMUSG00000024829	Mrpl21	84	58.511	ENSACIG00000012089	MRPL21	79	66.452	Amphilophus_citrinellus
ENSMUSG00000024829	Mrpl21	77	64.024	ENSAOCG00000012726	MRPL21	83	64.024	Amphiprion_ocellaris
ENSMUSG00000024829	Mrpl21	77	64.198	ENSAPEG00000005507	MRPL21	82	64.198	Amphiprion_percula
ENSMUSG00000024829	Mrpl21	86	60.104	ENSATEG00000021329	mrpl21	96	60.104	Anabas_testudineus
ENSMUSG00000024829	Mrpl21	82	71.345	ENSAPLG00000003685	MRPL21	96	71.345	Anas_platyrhynchos
ENSMUSG00000024829	Mrpl21	98	62.745	ENSACAG00000013770	MRPL21	94	65.426	Anolis_carolinensis
ENSMUSG00000024829	Mrpl21	93	83.077	ENSANAG00000020754	MRPL21	93	83.077	Aotus_nancymaae
ENSMUSG00000024829	Mrpl21	74	65.806	ENSACLG00000016665	-	79	65.806	Astatotilapia_calliptera
ENSMUSG00000024829	Mrpl21	79	62.424	ENSAMXG00000036794	mrpl21	95	57.609	Astyanax_mexicanus
ENSMUSG00000024829	Mrpl21	99	82.212	ENSBTAG00000004348	MRPL21	55	82.212	Bos_taurus
ENSMUSG00000024829	Mrpl21	58	37.190	WBGene00023422	mrpl-21	89	32.278	Caenorhabditis_elegans
ENSMUSG00000024829	Mrpl21	98	80.882	ENSCJAG00000015881	MRPL21	95	82.564	Callithrix_jacchus
ENSMUSG00000024829	Mrpl21	75	89.103	ENSCAFG00000031492	MRPL21	70	90.278	Canis_familiaris
ENSMUSG00000024829	Mrpl21	99	80.288	ENSCHIG00000020757	MRPL21	95	80.905	Capra_hircus
ENSMUSG00000024829	Mrpl21	98	80.882	ENSTSYG00000002850	MRPL21	95	82.051	Carlito_syrichta
ENSMUSG00000024829	Mrpl21	83	86.782	ENSCAPG00000014147	MRPL21	99	86.782	Cavia_aperea
ENSMUSG00000024829	Mrpl21	99	82.692	ENSCPOG00000038509	MRPL21	99	82.692	Cavia_porcellus
ENSMUSG00000024829	Mrpl21	98	73.039	ENSCCAG00000023999	MRPL21	95	74.359	Cebus_capucinus
ENSMUSG00000024829	Mrpl21	99	83.173	ENSCATG00000041171	MRPL21	93	84.615	Cercocebus_atys
ENSMUSG00000024829	Mrpl21	94	85.279	ENSCLAG00000016038	MRPL21	99	84.615	Chinchilla_lanigera
ENSMUSG00000024829	Mrpl21	99	82.212	ENSCSAG00000009065	MRPL21	93	83.590	Chlorocebus_sabaeus
ENSMUSG00000024829	Mrpl21	98	83.415	ENSCHOG00000002067	MRPL21	96	84.694	Choloepus_hoffmanni
ENSMUSG00000024829	Mrpl21	66	78.986	ENSCPBG00000008807	-	99	78.986	Chrysemys_picta_bellii
ENSMUSG00000024829	Mrpl21	56	68.644	ENSCPBG00000026901	-	70	72.727	Chrysemys_picta_bellii
ENSMUSG00000024829	Mrpl21	57	47.500	ENSCING00000022513	-	98	47.500	Ciona_intestinalis
ENSMUSG00000024829	Mrpl21	65	48.529	ENSCSAVG00000007364	-	60	48.529	Ciona_savignyi
ENSMUSG00000024829	Mrpl21	98	81.373	ENSCANG00000043723	MRPL21	95	83.077	Colobus_angolensis_palliatus
ENSMUSG00000024829	Mrpl21	100	90.909	ENSCGRG00001024565	Mrpl21	100	90.909	Cricetulus_griseus_chok1gshd
ENSMUSG00000024829	Mrpl21	100	90.909	ENSCGRG00000007332	Mrpl21	100	90.909	Cricetulus_griseus_crigri
ENSMUSG00000024829	Mrpl21	83	55.376	ENSCSEG00000020721	MRPL21	96	56.452	Cynoglossus_semilaevis
ENSMUSG00000024829	Mrpl21	74	63.226	ENSCVAG00000014089	mrpl21	80	63.226	Cyprinodon_variegatus
ENSMUSG00000024829	Mrpl21	99	56.938	ENSDARG00000003846	mrpl21	91	60.000	Danio_rerio
ENSMUSG00000024829	Mrpl21	95	81.818	ENSDNOG00000002330	-	72	81.340	Dasypus_novemcinctus
ENSMUSG00000024829	Mrpl21	83	83.333	ENSDORG00000025967	Mrpl21	99	83.333	Dipodomys_ordii
ENSMUSG00000024829	Mrpl21	63	40.458	FBgn0036853	mRpL21	65	40.458	Drosophila_melanogaster
ENSMUSG00000024829	Mrpl21	74	63.226	ENSEBUG00000008024	mrpl21	80	62.420	Eptatretus_burgeri
ENSMUSG00000024829	Mrpl21	80	64.881	ENSELUG00000023223	mrpl21	80	64.881	Esox_lucius
ENSMUSG00000024829	Mrpl21	94	83.163	ENSFCAG00000005779	MRPL21	94	83.163	Felis_catus
ENSMUSG00000024829	Mrpl21	75	73.077	ENSFALG00000011677	MRPL21	84	70.391	Ficedula_albicollis
ENSMUSG00000024829	Mrpl21	99	68.750	ENSFDAG00000015353	MRPL21	82	83.803	Fukomys_damarensis
ENSMUSG00000024829	Mrpl21	90	58.730	ENSFHEG00000003319	mrpl21	91	58.730	Fundulus_heteroclitus
ENSMUSG00000024829	Mrpl21	82	71.345	ENSGALG00000004362	MRPL21	98	67.204	Gallus_gallus
ENSMUSG00000024829	Mrpl21	74	65.161	ENSGAFG00000018076	mrpl21	79	65.161	Gambusia_affinis
ENSMUSG00000024829	Mrpl21	75	65.190	ENSGACG00000019780	-	82	62.874	Gasterosteus_aculeatus
ENSMUSG00000024829	Mrpl21	76	77.215	ENSGAGG00000020313	MRPL21	75	77.215	Gopherus_agassizii
ENSMUSG00000024829	Mrpl21	94	83.163	ENSGGOG00000012124	MRPL21	100	81.818	Gorilla_gorilla
ENSMUSG00000024829	Mrpl21	74	66.452	ENSHBUG00000006577	-	79	66.452	Haplochromis_burtoni
ENSMUSG00000024829	Mrpl21	99	82.212	ENSHGLG00000007657	MRPL21	94	84.264	Heterocephalus_glaber_female
ENSMUSG00000024829	Mrpl21	83	87.356	ENSHGLG00100008966	MRPL21	99	87.356	Heterocephalus_glaber_male
ENSMUSG00000024829	Mrpl21	74	64.516	ENSHCOG00000001927	-	81	64.516	Hippocampus_comes
ENSMUSG00000024829	Mrpl21	80	60.714	ENSIPUG00000017862	MRPL21	84	62.658	Ictalurus_punctatus
ENSMUSG00000024829	Mrpl21	84	84.000	ENSSTOG00000032759	MRPL21	100	84.000	Ictidomys_tridecemlineatus
ENSMUSG00000024829	Mrpl21	100	83.732	ENSJJAG00000018455	Mrpl21	100	83.732	Jaculus_jaculus
ENSMUSG00000024829	Mrpl21	79	61.047	ENSKMAG00000020148	mrpl21	88	61.047	Kryptolebias_marmoratus
ENSMUSG00000024829	Mrpl21	85	55.263	ENSLBEG00000001294	MRPL21	98	55.263	Labrus_bergylta
ENSMUSG00000024829	Mrpl21	96	63.184	ENSLACG00000018790	MRPL21	96	63.636	Latimeria_chalumnae
ENSMUSG00000024829	Mrpl21	80	67.262	ENSLOCG00000001501	mrpl21	82	67.262	Lepisosteus_oculatus
ENSMUSG00000024829	Mrpl21	99	79.327	ENSLAFG00000003336	MRPL21	94	81.026	Loxodonta_africana
ENSMUSG00000024829	Mrpl21	82	84.302	ENSMFAG00000043823	MRPL21	87	86.503	Macaca_fascicularis
ENSMUSG00000024829	Mrpl21	83	80.000	ENSMMUG00000010124	MRPL21	91	81.481	Macaca_mulatta
ENSMUSG00000024829	Mrpl21	99	82.692	ENSMNEG00000036906	MRPL21	93	84.103	Macaca_nemestrina
ENSMUSG00000024829	Mrpl21	98	83.333	ENSMLEG00000044097	MRPL21	95	85.128	Mandrillus_leucophaeus
ENSMUSG00000024829	Mrpl21	77	64.596	ENSMAMG00000001083	MRPL21	73	64.596	Mastacembelus_armatus
ENSMUSG00000024829	Mrpl21	74	65.806	ENSMZEG00005005496	-	79	65.806	Maylandia_zebra
ENSMUSG00000024829	Mrpl21	74	73.377	ENSMGAG00000002814	MRPL21	99	73.377	Meleagris_gallopavo
ENSMUSG00000024829	Mrpl21	100	89.952	ENSMAUG00000018243	Mrpl21	100	89.952	Mesocricetus_auratus
ENSMUSG00000024829	Mrpl21	100	80.861	ENSMICG00000046580	MRPL21	100	80.861	Microcebus_murinus
ENSMUSG00000024829	Mrpl21	100	90.431	ENSMOCG00000002555	Mrpl21	100	90.431	Microtus_ochrogaster
ENSMUSG00000024829	Mrpl21	88	59.239	ENSMMOG00000000053	-	94	59.239	Mola_mola
ENSMUSG00000024829	Mrpl21	85	72.316	ENSMODG00000004013	MRPL21	79	72.316	Monodelphis_domestica
ENSMUSG00000024829	Mrpl21	55	71.053	ENSMALG00000021416	mrpl21	71	71.053	Monopterus_albus
ENSMUSG00000024829	Mrpl21	100	98.086	MGP_CAROLIEiJ_G0022464	Mrpl21	100	98.086	Mus_caroli
ENSMUSG00000024829	Mrpl21	100	96.172	MGP_PahariEiJ_G0013961	-	100	96.172	Mus_pahari
ENSMUSG00000024829	Mrpl21	89	82.796	ENSMPUG00000004430	MRPL21	90	82.796	Mustela_putorius_furo
ENSMUSG00000024829	Mrpl21	84	87.500	ENSMLUG00000017397	MRPL21	94	87.500	Myotis_lucifugus
ENSMUSG00000024829	Mrpl21	98	84.390	ENSNGAG00000023813	Mrpl21	98	84.500	Nannospalax_galili
ENSMUSG00000024829	Mrpl21	100	82.775	ENSNLEG00000006605	MRPL21	94	84.184	Nomascus_leucogenys
ENSMUSG00000024829	Mrpl21	58	73.770	ENSMEUG00000012464	-	90	73.770	Notamacropus_eugenii
ENSMUSG00000024829	Mrpl21	99	62.500	ENSOPRG00000011828	MRPL21	95	63.918	Ochotona_princeps
ENSMUSG00000024829	Mrpl21	99	82.692	ENSODEG00000017369	MRPL21	99	82.692	Octodon_degus
ENSMUSG00000024829	Mrpl21	74	66.452	ENSONIG00000020699	MRPL21	79	66.452	Oreochromis_niloticus
ENSMUSG00000024829	Mrpl21	94	54.545	ENSORLG00000000120	MRPL21	93	55.051	Oryzias_latipes
ENSMUSG00000024829	Mrpl21	74	63.924	ENSORLG00020020197	-	71	63.924	Oryzias_latipes_hni
ENSMUSG00000024829	Mrpl21	74	64.935	ENSORLG00015020425	MRPL21	76	64.935	Oryzias_latipes_hsok
ENSMUSG00000024829	Mrpl21	88	56.633	ENSOMEG00000014420	MRPL21	98	56.633	Oryzias_melastigma
ENSMUSG00000024829	Mrpl21	84	80.899	ENSOARG00000016869	MRPL21	99	80.899	Ovis_aries
ENSMUSG00000024829	Mrpl21	94	83.673	ENSPPAG00000038393	MRPL21	100	82.297	Pan_paniscus
ENSMUSG00000024829	Mrpl21	98	79.902	ENSPPRG00000024109	MRPL21	96	81.633	Panthera_pardus
ENSMUSG00000024829	Mrpl21	80	78.571	ENSPTIG00000000955	MRPL21	99	84.694	Panthera_tigris_altaica
ENSMUSG00000024829	Mrpl21	94	83.163	ENSPTRG00000003988	MRPL21	100	81.818	Pan_troglodytes
ENSMUSG00000024829	Mrpl21	98	83.333	ENSPANG00000018811	MRPL21	95	85.128	Papio_anubis
ENSMUSG00000024829	Mrpl21	99	53.991	ENSPKIG00000012297	mrpl21	94	55.721	Paramormyrops_kingsleyae
ENSMUSG00000024829	Mrpl21	74	78.571	ENSPSIG00000015523	MRPL21	83	78.571	Pelodiscus_sinensis
ENSMUSG00000024829	Mrpl21	74	63.226	ENSPMGG00000000115	-	95	57.979	Periophthalmus_magnuspinnatus
ENSMUSG00000024829	Mrpl21	100	92.344	ENSPEMG00000015425	Mrpl21	100	92.344	Peromyscus_maniculatus_bairdii
ENSMUSG00000024829	Mrpl21	72	65.563	ENSPMAG00000008611	mrpl21	98	65.563	Petromyzon_marinus
ENSMUSG00000024829	Mrpl21	88	56.633	ENSPFOG00000020119	mrpl21	99	56.633	Poecilia_formosa
ENSMUSG00000024829	Mrpl21	74	65.161	ENSPLAG00000013159	mrpl21	76	65.161	Poecilia_latipinna
ENSMUSG00000024829	Mrpl21	74	65.806	ENSPMEG00000016468	mrpl21	76	65.806	Poecilia_mexicana
ENSMUSG00000024829	Mrpl21	77	62.346	ENSPREG00000021810	mrpl21	83	62.346	Poecilia_reticulata
ENSMUSG00000024829	Mrpl21	100	81.340	ENSPPYG00000002966	-	63	82.653	Pongo_abelii
ENSMUSG00000024829	Mrpl21	98	76.961	ENSPCAG00000003449	MRPL21	96	78.061	Procavia_capensis
ENSMUSG00000024829	Mrpl21	98	73.659	ENSPCOG00000015404	MRPL21	95	85.897	Propithecus_coquereli
ENSMUSG00000024829	Mrpl21	83	68.391	ENSPVAG00000006772	MRPL21	99	68.391	Pteropus_vampyrus
ENSMUSG00000024829	Mrpl21	74	66.452	ENSPNYG00000023486	-	79	66.452	Pundamilia_nyererei
ENSMUSG00000024829	Mrpl21	75	64.103	ENSPNAG00000003269	mrpl21	73	64.103	Pygocentrus_nattereri
ENSMUSG00000024829	Mrpl21	100	94.737	ENSRNOG00000013845	Mrpl21	100	94.737	Rattus_norvegicus
ENSMUSG00000024829	Mrpl21	99	83.173	ENSRBIG00000044044	MRPL21	93	84.615	Rhinopithecus_bieti
ENSMUSG00000024829	Mrpl21	99	82.692	ENSRROG00000025365	MRPL21	93	84.103	Rhinopithecus_roxellana
ENSMUSG00000024829	Mrpl21	93	82.564	ENSSBOG00000021429	MRPL21	99	81.250	Saimiri_boliviensis_boliviensis
ENSMUSG00000024829	Mrpl21	74	79.221	ENSSHAG00000000978	MRPL21	99	79.221	Sarcophilus_harrisii
ENSMUSG00000024829	Mrpl21	79	65.060	ENSSFOG00015019282	mrpl21	68	65.060	Scleropages_formosus
ENSMUSG00000024829	Mrpl21	78	61.905	ENSSMAG00000020855	mrpl21	85	61.905	Scophthalmus_maximus
ENSMUSG00000024829	Mrpl21	83	61.494	ENSSDUG00000001524	-	88	61.494	Seriola_dumerili
ENSMUSG00000024829	Mrpl21	83	62.069	ENSSLDG00000014690	-	88	62.069	Seriola_lalandi_dorsalis
ENSMUSG00000024829	Mrpl21	99	63.158	ENSSPUG00000008781	MRPL21	99	63.500	Sphenodon_punctatus
ENSMUSG00000024829	Mrpl21	82	61.628	ENSSPAG00000010420	MRPL21	86	63.473	Stegastes_partitus
ENSMUSG00000024829	Mrpl21	99	78.365	ENSSSCG00000012879	MRPL21	99	78.365	Sus_scrofa
ENSMUSG00000024829	Mrpl21	74	74.026	ENSTGUG00000006693	MRPL21	99	74.026	Taeniopygia_guttata
ENSMUSG00000024829	Mrpl21	78	63.580	ENSTRUG00000006299	-	81	63.580	Takifugu_rubripes
ENSMUSG00000024829	Mrpl21	81	63.529	ENSTNIG00000006295	-	83	63.529	Tetraodon_nigroviridis
ENSMUSG00000024829	Mrpl21	78	75.610	ENSTBEG00000017030	MRPL21	88	76.074	Tupaia_belangeri
ENSMUSG00000024829	Mrpl21	98	68.137	ENSTTRG00000013635	MRPL21	97	67.839	Tursiops_truncatus
ENSMUSG00000024829	Mrpl21	84	87.500	ENSUMAG00000018330	MRPL21	96	87.500	Ursus_maritimus
ENSMUSG00000024829	Mrpl21	74	67.742	ENSXETG00000019978	mrpl21	94	64.881	Xenopus_tropicalis
ENSMUSG00000024829	Mrpl21	74	63.871	ENSXCOG00000011393	mrpl21	77	63.871	Xiphophorus_couchianus
ENSMUSG00000024829	Mrpl21	74	63.226	ENSXMAG00000020294	mrpl21	76	63.226	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0008150	biological_process	-	ND	Process