EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024831 (Gene tree)
Gene ID: 20589
Gene Symbol: Ighmbp2
Alias: AEP|Catf1|RIPE3b1|Smbp-2|Smbp2|Smubp2|p110 subunit|sma
Full Name: immunoglobulin mu binding protein 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 22094 bases
Position: chr19:3260924-3283017
Accession: 99954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000113438	R3H	PF01424.22	3.6e-12	1	1
ENSMUSP00000025751	R3H	PF01424.22	4.1e-12	1	1
ENSMUSP00000113438	ResIII	PF04851.15	8.5e-06	1	1
ENSMUSP00000025751	ResIII	PF04851.15	1.1e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000119292	-	3513	-	ENSMUSP00000113438	885 (aa)	-	D3Z5P5
ENSMUST00000154537	-	2697	-	ENSMUSP00000122827	253 (aa)	-	D6RFT3
ENSMUST00000143079	-	901	-	-	- (aa)	-	-
ENSMUST00000025751	-	3720	XM_006531702	ENSMUSP00000025751	993 (aa)	XP_006531765	A0A0B4J1E3

Gene Model

Click here to download ENSMUSG00000024831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024831's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024831	Ighmbp2	100	76.436	ENSG00000132740	IGHMBP2	100	82.759	Homo_sapiens
ENSMUSG00000024831	Ighmbp2	99	58.458	ENSAPOG00000009399	ighmbp2	99	58.036	Acanthochromis_polyacanthus
ENSMUSG00000024831	Ighmbp2	99	74.598	ENSAMEG00000008568	IGHMBP2	100	75.149	Ailuropoda_melanoleuca
ENSMUSG00000024831	Ighmbp2	99	58.972	ENSACIG00000004670	ighmbp2	99	58.142	Amphilophus_citrinellus
ENSMUSG00000024831	Ighmbp2	99	58.442	ENSAOCG00000019390	ighmbp2	99	57.837	Amphiprion_ocellaris
ENSMUSG00000024831	Ighmbp2	99	58.741	ENSAPEG00000021713	ighmbp2	99	58.225	Amphiprion_percula
ENSMUSG00000024831	Ighmbp2	99	59.263	ENSATEG00000010246	ighmbp2	96	58.659	Anabas_testudineus
ENSMUSG00000024831	Ighmbp2	96	65.047	ENSAPLG00000003251	IGHMBP2	100	65.031	Anas_platyrhynchos
ENSMUSG00000024831	Ighmbp2	99	61.433	ENSACAG00000013702	IGHMBP2	99	61.057	Anolis_carolinensis
ENSMUSG00000024831	Ighmbp2	100	75.992	ENSANAG00000027309	IGHMBP2	100	75.800	Aotus_nancymaae
ENSMUSG00000024831	Ighmbp2	99	58.184	ENSACLG00000014140	ighmbp2	99	57.700	Astatotilapia_calliptera
ENSMUSG00000024831	Ighmbp2	99	58.169	ENSAMXG00000000503	ighmbp2	99	56.989	Astyanax_mexicanus
ENSMUSG00000024831	Ighmbp2	99	72.527	ENSBTAG00000022185	IGHMBP2	99	72.233	Bos_taurus
ENSMUSG00000024831	Ighmbp2	100	74.049	ENSCJAG00000015887	IGHMBP2	93	75.025	Callithrix_jacchus
ENSMUSG00000024831	Ighmbp2	99	74.597	ENSCAFG00000010745	IGHMBP2	100	74.451	Canis_familiaris
ENSMUSG00000024831	Ighmbp2	69	69.188	ENSCAFG00020015362	IGHMBP2	89	68.226	Canis_lupus_dingo
ENSMUSG00000024831	Ighmbp2	99	73.795	ENSCHIG00000011703	IGHMBP2	99	73.521	Capra_hircus
ENSMUSG00000024831	Ighmbp2	98	77.449	ENSCAPG00000001471	IGHMBP2	99	77.245	Cavia_aperea
ENSMUSG00000024831	Ighmbp2	99	78.586	ENSCPOG00000007063	IGHMBP2	94	77.889	Cavia_porcellus
ENSMUSG00000024831	Ighmbp2	99	75.770	ENSCCAG00000027106	IGHMBP2	99	75.224	Cebus_capucinus
ENSMUSG00000024831	Ighmbp2	100	68.123	ENSCATG00000031229	IGHMBP2	100	68.100	Cercocebus_atys
ENSMUSG00000024831	Ighmbp2	99	77.789	ENSCLAG00000015500	IGHMBP2	99	76.946	Chinchilla_lanigera
ENSMUSG00000024831	Ighmbp2	100	75.173	ENSCSAG00000009185	IGHMBP2	100	75.199	Chlorocebus_sabaeus
ENSMUSG00000024831	Ighmbp2	99	64.950	ENSCPBG00000008799	IGHMBP2	99	64.856	Chrysemys_picta_bellii
ENSMUSG00000024831	Ighmbp2	91	47.172	ENSCING00000005102	zf(an1/a20like)-2	87	47.433	Ciona_intestinalis
ENSMUSG00000024831	Ighmbp2	99	45.714	ENSCSAVG00000006222	-	99	46.016	Ciona_savignyi
ENSMUSG00000024831	Ighmbp2	100	75.446	ENSCANG00000043714	IGHMBP2	100	75.050	Colobus_angolensis_palliatus
ENSMUSG00000024831	Ighmbp2	100	89.728	ENSCGRG00001019126	Ighmbp2	100	89.728	Cricetulus_griseus_chok1gshd
ENSMUSG00000024831	Ighmbp2	100	89.728	ENSCGRG00000009642	Ighmbp2	100	89.728	Cricetulus_griseus_crigri
ENSMUSG00000024831	Ighmbp2	99	58.317	ENSCSEG00000007513	ighmbp2	99	58.048	Cynoglossus_semilaevis
ENSMUSG00000024831	Ighmbp2	97	59.462	ENSCVAG00000007876	ighmbp2	99	59.194	Cyprinodon_variegatus
ENSMUSG00000024831	Ighmbp2	99	57.222	ENSDARG00000069274	ighmbp2	99	56.825	Danio_rerio
ENSMUSG00000024831	Ighmbp2	99	72.827	ENSDNOG00000002334	IGHMBP2	100	72.718	Dasypus_novemcinctus
ENSMUSG00000024831	Ighmbp2	85	74.769	ENSDORG00000026350	Ighmbp2	100	69.065	Dipodomys_ordii
ENSMUSG00000024831	Ighmbp2	93	69.828	ENSETEG00000003178	IGHMBP2	93	69.828	Echinops_telfairi
ENSMUSG00000024831	Ighmbp2	99	52.092	ENSEBUG00000010471	ighmbp2	99	52.092	Eptatretus_burgeri
ENSMUSG00000024831	Ighmbp2	99	75.426	ENSEASG00005007735	IGHMBP2	100	74.801	Equus_asinus_asinus
ENSMUSG00000024831	Ighmbp2	97	74.394	ENSECAG00000019360	IGHMBP2	98	74.562	Equus_caballus
ENSMUSG00000024831	Ighmbp2	99	56.613	ENSELUG00000023450	ighmbp2	99	56.426	Esox_lucius
ENSMUSG00000024831	Ighmbp2	99	71.754	ENSFCAG00000010879	IGHMBP2	100	72.222	Felis_catus
ENSMUSG00000024831	Ighmbp2	99	59.182	ENSFALG00000011604	IGHMBP2	100	59.960	Ficedula_albicollis
ENSMUSG00000024831	Ighmbp2	92	83.564	ENSFDAG00000005011	IGHMBP2	92	83.564	Fukomys_damarensis
ENSMUSG00000024831	Ighmbp2	99	58.923	ENSFHEG00000021211	ighmbp2	99	58.200	Fundulus_heteroclitus
ENSMUSG00000024831	Ighmbp2	99	56.740	ENSGMOG00000017553	ighmbp2	99	56.244	Gadus_morhua
ENSMUSG00000024831	Ighmbp2	96	64.410	ENSGALG00000004328	IGHMBP2	100	63.330	Gallus_gallus
ENSMUSG00000024831	Ighmbp2	99	57.600	ENSGAFG00000020770	ighmbp2	99	58.000	Gambusia_affinis
ENSMUSG00000024831	Ighmbp2	99	56.932	ENSGACG00000005293	ighmbp2	99	57.749	Gasterosteus_aculeatus
ENSMUSG00000024831	Ighmbp2	99	65.396	ENSGAGG00000020312	IGHMBP2	92	65.239	Gopherus_agassizii
ENSMUSG00000024831	Ighmbp2	100	75.838	ENSGGOG00000012131	IGHMBP2	100	76.400	Gorilla_gorilla
ENSMUSG00000024831	Ighmbp2	99	58.358	ENSHBUG00000018318	ighmbp2	99	57.758	Haplochromis_burtoni
ENSMUSG00000024831	Ighmbp2	99	76.754	ENSHGLG00000006468	IGHMBP2	99	76.630	Heterocephalus_glaber_female
ENSMUSG00000024831	Ighmbp2	99	76.653	ENSHGLG00100009290	IGHMBP2	99	76.530	Heterocephalus_glaber_male
ENSMUSG00000024831	Ighmbp2	99	58.191	ENSHCOG00000018786	ighmbp2	99	58.216	Hippocampus_comes
ENSMUSG00000024831	Ighmbp2	99	56.040	ENSIPUG00000023036	ighmbp2	99	55.859	Ictalurus_punctatus
ENSMUSG00000024831	Ighmbp2	98	71.724	ENSSTOG00000003792	IGHMBP2	100	68.615	Ictidomys_tridecemlineatus
ENSMUSG00000024831	Ighmbp2	100	82.265	ENSJJAG00000022964	Ighmbp2	100	82.265	Jaculus_jaculus
ENSMUSG00000024831	Ighmbp2	99	58.871	ENSKMAG00000020284	ighmbp2	99	58.468	Kryptolebias_marmoratus
ENSMUSG00000024831	Ighmbp2	99	57.114	ENSLBEG00000014501	ighmbp2	99	56.716	Labrus_bergylta
ENSMUSG00000024831	Ighmbp2	99	59.300	ENSLACG00000018792	IGHMBP2	99	59.505	Latimeria_chalumnae
ENSMUSG00000024831	Ighmbp2	99	56.832	ENSLOCG00000001512	ighmbp2	99	56.730	Lepisosteus_oculatus
ENSMUSG00000024831	Ighmbp2	76	71.616	ENSLAFG00000022445	IGHMBP2	100	70.351	Loxodonta_africana
ENSMUSG00000024831	Ighmbp2	100	75.619	ENSMFAG00000043909	IGHMBP2	100	75.749	Macaca_fascicularis
ENSMUSG00000024831	Ighmbp2	100	72.052	ENSMNEG00000043511	IGHMBP2	100	72.156	Macaca_nemestrina
ENSMUSG00000024831	Ighmbp2	100	75.421	ENSMLEG00000043529	IGHMBP2	100	75.549	Mandrillus_leucophaeus
ENSMUSG00000024831	Ighmbp2	99	57.800	ENSMAMG00000005532	ighmbp2	99	57.916	Mastacembelus_armatus
ENSMUSG00000024831	Ighmbp2	99	58.283	ENSMZEG00005000665	ighmbp2	99	57.800	Maylandia_zebra
ENSMUSG00000024831	Ighmbp2	96	64.012	ENSMGAG00000002792	IGHMBP2	100	63.366	Meleagris_gallopavo
ENSMUSG00000024831	Ighmbp2	100	89.225	ENSMAUG00000019893	Ighmbp2	100	89.225	Mesocricetus_auratus
ENSMUSG00000024831	Ighmbp2	93	81.857	ENSMICG00000043944	IGHMBP2	99	81.857	Microcebus_murinus
ENSMUSG00000024831	Ighmbp2	100	89.527	ENSMOCG00000018939	Ighmbp2	100	89.527	Microtus_ochrogaster
ENSMUSG00000024831	Ighmbp2	99	58.140	ENSMMOG00000001234	ighmbp2	99	57.475	Mola_mola
ENSMUSG00000024831	Ighmbp2	99	63.718	ENSMODG00000004040	IGHMBP2	89	63.834	Monodelphis_domestica
ENSMUSG00000024831	Ighmbp2	99	57.385	ENSMALG00000006457	ighmbp2	99	57.570	Monopterus_albus
ENSMUSG00000024831	Ighmbp2	100	96.479	MGP_CAROLIEiJ_G0022463	Ighmbp2	100	96.479	Mus_caroli
ENSMUSG00000024831	Ighmbp2	100	95.267	MGP_PahariEiJ_G0013960	Ighmbp2	100	95.267	Mus_pahari
ENSMUSG00000024831	Ighmbp2	100	99.094	MGP_SPRETEiJ_G0014700	Ighmbp2	100	100.000	Mus_spretus
ENSMUSG00000024831	Ighmbp2	97	72.551	ENSMPUG00000004439	IGHMBP2	100	73.279	Mustela_putorius_furo
ENSMUSG00000024831	Ighmbp2	100	80.422	ENSNGAG00000006566	Ighmbp2	100	81.124	Nannospalax_galili
ENSMUSG00000024831	Ighmbp2	97	59.013	ENSNBRG00000014911	ighmbp2	99	57.295	Neolamprologus_brichardi
ENSMUSG00000024831	Ighmbp2	100	71.486	ENSNLEG00000006609	IGHMBP2	100	71.013	Nomascus_leucogenys
ENSMUSG00000024831	Ighmbp2	64	60.000	ENSOPRG00000011904	-	99	59.282	Ochotona_princeps
ENSMUSG00000024831	Ighmbp2	99	76.977	ENSODEG00000017354	IGHMBP2	99	77.131	Octodon_degus
ENSMUSG00000024831	Ighmbp2	99	58.635	ENSONIG00000015506	ighmbp2	99	58.249	Oreochromis_niloticus
ENSMUSG00000024831	Ighmbp2	99	58.158	ENSORLG00000006561	ighmbp2	99	58.058	Oryzias_latipes
ENSMUSG00000024831	Ighmbp2	99	58.000	ENSORLG00020008462	ighmbp2	99	57.900	Oryzias_latipes_hni
ENSMUSG00000024831	Ighmbp2	99	56.627	ENSORLG00015001563	ighmbp2	99	56.827	Oryzias_latipes_hsok
ENSMUSG00000024831	Ighmbp2	99	58.000	ENSOMEG00000019296	ighmbp2	99	58.175	Oryzias_melastigma
ENSMUSG00000024831	Ighmbp2	99	72.183	ENSOGAG00000011671	IGHMBP2	99	72.300	Otolemur_garnettii
ENSMUSG00000024831	Ighmbp2	97	69.462	ENSOARG00000016959	IGHMBP2	99	69.678	Ovis_aries
ENSMUSG00000024831	Ighmbp2	100	76.710	ENSPPAG00000027355	IGHMBP2	100	76.984	Pan_paniscus
ENSMUSG00000024831	Ighmbp2	99	73.131	ENSPPRG00000024194	IGHMBP2	100	73.521	Panthera_pardus
ENSMUSG00000024831	Ighmbp2	100	77.007	ENSPTRG00000003989	IGHMBP2	100	76.969	Pan_troglodytes
ENSMUSG00000024831	Ighmbp2	100	71.853	ENSPANG00000023650	IGHMBP2	100	71.956	Papio_anubis
ENSMUSG00000024831	Ighmbp2	99	57.612	ENSPKIG00000019306	ighmbp2	99	57.171	Paramormyrops_kingsleyae
ENSMUSG00000024831	Ighmbp2	95	65.636	ENSPSIG00000015808	IGHMBP2	100	63.925	Pelodiscus_sinensis
ENSMUSG00000024831	Ighmbp2	100	89.728	ENSPEMG00000017775	Ighmbp2	100	89.728	Peromyscus_maniculatus_bairdii
ENSMUSG00000024831	Ighmbp2	94	69.084	ENSPCIG00000011064	IGHMBP2	99	62.440	Phascolarctos_cinereus
ENSMUSG00000024831	Ighmbp2	99	57.455	ENSPFOG00000010607	ighmbp2	99	58.375	Poecilia_formosa
ENSMUSG00000024831	Ighmbp2	99	58.216	ENSPLAG00000003917	ighmbp2	99	58.500	Poecilia_latipinna
ENSMUSG00000024831	Ighmbp2	99	57.708	ENSPMEG00000021063	ighmbp2	99	58.367	Poecilia_mexicana
ENSMUSG00000024831	Ighmbp2	99	58.032	ENSPREG00000011223	ighmbp2	99	58.167	Poecilia_reticulata
ENSMUSG00000024831	Ighmbp2	66	71.049	ENSPPYG00000002965	-	100	71.946	Pongo_abelii
ENSMUSG00000024831	Ighmbp2	57	75.385	ENSPCAG00000003490	-	57	75.385	Procavia_capensis
ENSMUSG00000024831	Ighmbp2	99	74.145	ENSPCOG00000018759	IGHMBP2	99	74.245	Propithecus_coquereli
ENSMUSG00000024831	Ighmbp2	86	69.311	ENSPVAG00000012921	IGHMBP2	100	68.551	Pteropus_vampyrus
ENSMUSG00000024831	Ighmbp2	99	58.283	ENSPNYG00000015003	ighmbp2	99	57.800	Pundamilia_nyererei
ENSMUSG00000024831	Ighmbp2	99	57.864	ENSPNAG00000013815	ighmbp2	99	57.864	Pygocentrus_nattereri
ENSMUSG00000024831	Ighmbp2	100	92.145	ENSRNOG00000013456	Ighmbp2	100	91.648	Rattus_norvegicus
ENSMUSG00000024831	Ighmbp2	100	75.545	ENSRBIG00000044249	IGHMBP2	100	75.622	Rhinopithecus_bieti
ENSMUSG00000024831	Ighmbp2	100	75.842	ENSRROG00000045646	IGHMBP2	100	75.920	Rhinopithecus_roxellana
ENSMUSG00000024831	Ighmbp2	71	34.564	YKL017C	HCS1	98	34.970	Saccharomyces_cerevisiae
ENSMUSG00000024831	Ighmbp2	100	71.825	ENSSBOG00000021342	IGHMBP2	100	71.856	Saimiri_boliviensis_boliviensis
ENSMUSG00000024831	Ighmbp2	76	60.101	ENSSHAG00000001585	-	99	61.154	Sarcophilus_harrisii
ENSMUSG00000024831	Ighmbp2	99	56.145	ENSSFOG00015016074	ighmbp2	92	56.098	Scleropages_formosus
ENSMUSG00000024831	Ighmbp2	99	57.570	ENSSMAG00000013687	ighmbp2	99	57.455	Scophthalmus_maximus
ENSMUSG00000024831	Ighmbp2	99	57.800	ENSSDUG00000013150	ighmbp2	99	57.994	Seriola_dumerili
ENSMUSG00000024831	Ighmbp2	99	57.784	ENSSLDG00000023119	ighmbp2	99	57.869	Seriola_lalandi_dorsalis
ENSMUSG00000024831	Ighmbp2	64	61.679	ENSSPUG00000008810	IGHMBP2	99	61.178	Sphenodon_punctatus
ENSMUSG00000024831	Ighmbp2	99	58.275	ENSSPAG00000011541	ighmbp2	99	58.216	Stegastes_partitus
ENSMUSG00000024831	Ighmbp2	99	71.903	ENSSSCG00000012878	IGHMBP2	99	70.842	Sus_scrofa
ENSMUSG00000024831	Ighmbp2	96	62.065	ENSTGUG00000006705	-	100	62.872	Taeniopygia_guttata
ENSMUSG00000024831	Ighmbp2	99	56.789	ENSTRUG00000003491	ighmbp2	99	56.690	Takifugu_rubripes
ENSMUSG00000024831	Ighmbp2	99	56.095	ENSTNIG00000016069	ighmbp2	99	56.830	Tetraodon_nigroviridis
ENSMUSG00000024831	Ighmbp2	89	69.405	ENSTBEG00000017260	IGHMBP2	94	69.405	Tupaia_belangeri
ENSMUSG00000024831	Ighmbp2	88	81.356	ENSTTRG00000013636	IGHMBP2	88	81.356	Tursiops_truncatus
ENSMUSG00000024831	Ighmbp2	99	73.879	ENSUAMG00000024817	IGHMBP2	100	74.334	Ursus_americanus
ENSMUSG00000024831	Ighmbp2	99	72.470	ENSUMAG00000018347	IGHMBP2	99	71.976	Ursus_maritimus
ENSMUSG00000024831	Ighmbp2	99	73.313	ENSVVUG00000004811	IGHMBP2	100	73.486	Vulpes_vulpes
ENSMUSG00000024831	Ighmbp2	91	62.677	ENSXETG00000031258	IGHMBP2	100	62.144	Xenopus_tropicalis
ENSMUSG00000024831	Ighmbp2	99	57.711	ENSXCOG00000003758	ighmbp2	99	57.727	Xiphophorus_couchianus
ENSMUSG00000024831	Ighmbp2	99	57.001	ENSXMAG00000003705	ighmbp2	99	57.600	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	19299493.	ISO	Function
GO:0000122	negative regulation of transcription by RNA polymerase II	15358184.	IDA	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	-	ISO	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	-	ISO	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	ISO	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	ISO	Function
GO:0005634	nucleus	19299493.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	19299493.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006412	translation	19299493.	NAS	Process
GO:0008094	DNA-dependent ATPase activity	-	ISO	Function
GO:0008134	transcription factor binding	-	ISO	Function
GO:0008186	RNA-dependent ATPase activity	-	ISO	Function
GO:0008270	zinc ion binding	-	IEA	Function
GO:0016787	hydrolase activity	-	IEA	Function
GO:0021522	spinal cord motor neuron differentiation	19299493.	IMP	Process
GO:0030424	axon	19158098.	IDA	Component
GO:0030426	growth cone	19158098.	IDA	Component
GO:0032575	ATP-dependent 5'-3' RNA helicase activity	-	ISO	Function
GO:0042995	cell projection	-	IEA	Component
GO:0043022	ribosome binding	19158098.	IDA	Function
GO:0043022	ribosome binding	-	ISO	Function
GO:0043025	neuronal cell body	15269181.	IDA	Component
GO:0043141	ATP-dependent 5'-3' DNA helicase activity	-	ISO	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0048471	perinuclear region of cytoplasm	19158098.	IDA	Component
GO:0050905	neuromuscular process	15888478.	IMP	Process
GO:0051260	protein homooligomerization	19299493.	ISO	Process
GO:1990904	ribonucleoprotein complex	19158098.	IDA	Component
GO:1990955	G-rich single-stranded DNA binding	8493094.	IDA	Function