EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024902 (Gene tree)
Gene ID: 66419
Gene Symbol: Mrpl11
Alias: 2410001P07Rik
Full Name: mitochondrial ribosomal protein L11
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 4690 bases
Position: chr19:4962306-4966995
Accession: 2137215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000025836	Ribosomal_L11	PF00298.19	1.8e-22	1	1
ENSMUSP00000025836	Ribosomal_L11_N	PF03946.14	6.2e-24	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000025836	-	2882	XM_006531821	ENSMUSP00000025836	192 (aa)	XP_006531884	Q9CQF0

Gene Model

Click here to download ENSMUSG00000024902's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024902's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024902	Mrpl11	100	87.500	ENSG00000174547	MRPL11	100	87.500	Homo_sapiens
ENSMUSG00000024902	Mrpl11	89	64.740	ENSAPOG00000005713	mrpl11	88	64.740	Acanthochromis_polyacanthus
ENSMUSG00000024902	Mrpl11	100	91.146	ENSAMEG00000011350	MRPL11	100	91.146	Ailuropoda_melanoleuca
ENSMUSG00000024902	Mrpl11	96	61.957	ENSACIG00000010480	mrpl11	91	62.222	Amphilophus_citrinellus
ENSMUSG00000024902	Mrpl11	89	65.497	ENSAOCG00000007308	mrpl11	88	65.497	Amphiprion_ocellaris
ENSMUSG00000024902	Mrpl11	89	65.497	ENSAPEG00000008704	mrpl11	88	65.497	Amphiprion_percula
ENSMUSG00000024902	Mrpl11	89	66.082	ENSATEG00000015240	mrpl11	89	66.082	Anabas_testudineus
ENSMUSG00000024902	Mrpl11	100	85.417	ENSANAG00000021898	MRPL11	100	85.417	Aotus_nancymaae
ENSMUSG00000024902	Mrpl11	89	64.912	ENSACLG00000018663	mrpl11	88	64.912	Astatotilapia_calliptera
ENSMUSG00000024902	Mrpl11	89	66.082	ENSAMXG00000036903	mrpl11	90	66.082	Astyanax_mexicanus
ENSMUSG00000024902	Mrpl11	100	91.667	ENSBTAG00000053687	MRPL11	100	91.667	Bos_taurus
ENSMUSG00000024902	Mrpl11	79	46.711	WBGene00015133	mrpl-11	76	46.711	Caenorhabditis_elegans
ENSMUSG00000024902	Mrpl11	100	84.896	ENSCJAG00000001470	MRPL11	92	84.444	Callithrix_jacchus
ENSMUSG00000024902	Mrpl11	100	90.625	ENSCAFG00000012706	MRPL11	100	90.625	Canis_familiaris
ENSMUSG00000024902	Mrpl11	100	90.625	ENSCAFG00020015432	MRPL11	100	90.625	Canis_lupus_dingo
ENSMUSG00000024902	Mrpl11	100	90.625	ENSCHIG00000014851	MRPL11	100	90.625	Capra_hircus
ENSMUSG00000024902	Mrpl11	100	90.104	ENSTSYG00000008712	MRPL11	100	90.104	Carlito_syrichta
ENSMUSG00000024902	Mrpl11	100	90.625	ENSCPOG00000000687	MRPL11	100	90.625	Cavia_porcellus
ENSMUSG00000024902	Mrpl11	100	87.500	ENSCCAG00000030195	MRPL11	100	87.500	Cebus_capucinus
ENSMUSG00000024902	Mrpl11	100	87.500	ENSCATG00000029345	MRPL11	94	87.222	Cercocebus_atys
ENSMUSG00000024902	Mrpl11	100	91.667	ENSCLAG00000016161	MRPL11	100	91.667	Chinchilla_lanigera
ENSMUSG00000024902	Mrpl11	100	88.542	ENSCSAG00000008217	MRPL11	94	88.333	Chlorocebus_sabaeus
ENSMUSG00000024902	Mrpl11	82	91.083	ENSCHOG00000010471	MRPL11	100	91.083	Choloepus_hoffmanni
ENSMUSG00000024902	Mrpl11	96	38.830	ENSCING00000004394	-	93	38.587	Ciona_intestinalis
ENSMUSG00000024902	Mrpl11	100	89.583	ENSCANG00000029750	MRPL11	100	89.583	Colobus_angolensis_palliatus
ENSMUSG00000024902	Mrpl11	100	92.188	ENSCGRG00001012748	Mrpl11	100	92.188	Cricetulus_griseus_chok1gshd
ENSMUSG00000024902	Mrpl11	100	92.188	ENSCGRG00000017537	Mrpl11	100	92.188	Cricetulus_griseus_crigri
ENSMUSG00000024902	Mrpl11	89	62.573	ENSCSEG00000004826	mrpl11	88	62.573	Cynoglossus_semilaevis
ENSMUSG00000024902	Mrpl11	89	66.667	ENSCVAG00000018209	mrpl11	88	66.667	Cyprinodon_variegatus
ENSMUSG00000024902	Mrpl11	91	65.714	ENSDARG00000013075	mrpl11	92	65.556	Danio_rerio
ENSMUSG00000024902	Mrpl11	93	91.573	ENSDNOG00000037861	MRPL11	100	91.667	Dasypus_novemcinctus
ENSMUSG00000024902	Mrpl11	90	81.977	ENSDORG00000023531	Mrpl11	100	88.535	Dipodomys_ordii
ENSMUSG00000024902	Mrpl11	92	39.548	FBgn0038234	mRpL11	89	39.548	Drosophila_melanogaster
ENSMUSG00000024902	Mrpl11	100	88.542	ENSETEG00000015216	MRPL11	100	88.542	Echinops_telfairi
ENSMUSG00000024902	Mrpl11	70	57.778	ENSEBUG00000008014	mrpl11	72	58.779	Eptatretus_burgeri
ENSMUSG00000024902	Mrpl11	100	84.896	ENSEASG00005004988	MRPL11	100	84.896	Equus_asinus_asinus
ENSMUSG00000024902	Mrpl11	100	91.146	ENSECAG00000013737	MRPL11	100	91.146	Equus_caballus
ENSMUSG00000024902	Mrpl11	98	85.106	ENSEEUG00000011113	MRPL11	93	85.556	Erinaceus_europaeus
ENSMUSG00000024902	Mrpl11	89	68.421	ENSELUG00000002807	mrpl11	93	66.854	Esox_lucius
ENSMUSG00000024902	Mrpl11	93	89.385	ENSFCAG00000028353	MRPL11	100	89.583	Felis_catus
ENSMUSG00000024902	Mrpl11	100	89.583	ENSFDAG00000011509	MRPL11	100	89.583	Fukomys_damarensis
ENSMUSG00000024902	Mrpl11	89	67.251	ENSFHEG00000015521	mrpl11	92	65.556	Fundulus_heteroclitus
ENSMUSG00000024902	Mrpl11	89	65.116	ENSGMOG00000004943	mrpl11	92	65.116	Gadus_morhua
ENSMUSG00000024902	Mrpl11	89	65.497	ENSGAFG00000019857	mrpl11	87	65.497	Gambusia_affinis
ENSMUSG00000024902	Mrpl11	89	66.279	ENSGACG00000017077	mrpl11	92	64.804	Gasterosteus_aculeatus
ENSMUSG00000024902	Mrpl11	89	66.082	ENSGAGG00000013814	MRPL11	91	65.341	Gopherus_agassizii
ENSMUSG00000024902	Mrpl11	100	86.979	ENSGGOG00000001300	MRPL11	94	87.222	Gorilla_gorilla
ENSMUSG00000024902	Mrpl11	89	65.497	ENSHBUG00000013559	mrpl11	88	65.497	Haplochromis_burtoni
ENSMUSG00000024902	Mrpl11	100	89.062	ENSHGLG00000016487	MRPL11	100	89.062	Heterocephalus_glaber_female
ENSMUSG00000024902	Mrpl11	100	89.062	ENSHGLG00100017113	MRPL11	100	89.062	Heterocephalus_glaber_male
ENSMUSG00000024902	Mrpl11	89	65.497	ENSHCOG00000004011	mrpl11	87	65.497	Hippocampus_comes
ENSMUSG00000024902	Mrpl11	89	69.006	ENSIPUG00000021526	MRPL11	90	69.006	Ictalurus_punctatus
ENSMUSG00000024902	Mrpl11	82	89.873	ENSSTOG00000025971	MRPL11	100	89.873	Ictidomys_tridecemlineatus
ENSMUSG00000024902	Mrpl11	100	93.229	ENSJJAG00000020430	Mrpl11	100	93.229	Jaculus_jaculus
ENSMUSG00000024902	Mrpl11	89	67.836	ENSKMAG00000003125	mrpl11	91	66.111	Kryptolebias_marmoratus
ENSMUSG00000024902	Mrpl11	89	66.667	ENSLBEG00000007638	mrpl11	88	66.667	Labrus_bergylta
ENSMUSG00000024902	Mrpl11	68	56.489	ENSLACG00000005779	MRPL11	86	56.489	Latimeria_chalumnae
ENSMUSG00000024902	Mrpl11	100	65.979	ENSLOCG00000000617	mrpl11	99	65.979	Lepisosteus_oculatus
ENSMUSG00000024902	Mrpl11	100	88.542	ENSLAFG00000011143	MRPL11	94	88.889	Loxodonta_africana
ENSMUSG00000024902	Mrpl11	100	88.542	ENSMFAG00000042321	MRPL11	94	88.333	Macaca_fascicularis
ENSMUSG00000024902	Mrpl11	100	88.542	ENSMMUG00000008876	MRPL11	94	88.333	Macaca_mulatta
ENSMUSG00000024902	Mrpl11	100	88.542	ENSMNEG00000041903	MRPL11	100	88.542	Macaca_nemestrina
ENSMUSG00000024902	Mrpl11	100	87.500	ENSMLEG00000044104	MRPL11	94	87.222	Mandrillus_leucophaeus
ENSMUSG00000024902	Mrpl11	89	66.667	ENSMAMG00000021038	mrpl11	92	65.000	Mastacembelus_armatus
ENSMUSG00000024902	Mrpl11	89	65.497	ENSMZEG00005005523	mrpl11	88	65.497	Maylandia_zebra
ENSMUSG00000024902	Mrpl11	100	92.188	ENSMAUG00000006941	Mrpl11	100	92.188	Mesocricetus_auratus
ENSMUSG00000024902	Mrpl11	100	89.583	ENSMICG00000003759	MRPL11	100	89.583	Microcebus_murinus
ENSMUSG00000024902	Mrpl11	100	93.750	ENSMOCG00000018594	Mrpl11	100	93.750	Microtus_ochrogaster
ENSMUSG00000024902	Mrpl11	89	53.801	ENSMMOG00000002541	mrpl11	85	53.801	Mola_mola
ENSMUSG00000024902	Mrpl11	89	80.117	ENSMODG00000008273	MRPL11	93	79.444	Monodelphis_domestica
ENSMUSG00000024902	Mrpl11	99	62.632	ENSMALG00000011049	mrpl11	99	63.889	Monopterus_albus
ENSMUSG00000024902	Mrpl11	100	100.000	MGP_CAROLIEiJ_G0022526	Mrpl11	100	100.000	Mus_caroli
ENSMUSG00000024902	Mrpl11	100	98.438	MGP_PahariEiJ_G0014023	Mrpl11	100	98.438	Mus_pahari
ENSMUSG00000024902	Mrpl11	100	100.000	MGP_SPRETEiJ_G0023440	Mrpl11	100	100.000	Mus_spretus
ENSMUSG00000024902	Mrpl11	100	91.667	ENSMPUG00000003047	MRPL11	100	91.667	Mustela_putorius_furo
ENSMUSG00000024902	Mrpl11	94	88.333	ENSMLUG00000004047	MRPL11	93	88.333	Myotis_lucifugus
ENSMUSG00000024902	Mrpl11	100	93.229	ENSNGAG00000005875	Mrpl11	100	93.229	Nannospalax_galili
ENSMUSG00000024902	Mrpl11	89	65.497	ENSNBRG00000023089	mrpl11	88	65.497	Neolamprologus_brichardi
ENSMUSG00000024902	Mrpl11	82	87.898	ENSNLEG00000028893	MRPL11	87	87.342	Nomascus_leucogenys
ENSMUSG00000024902	Mrpl11	93	83.146	ENSMEUG00000010291	MRPL11	92	83.146	Notamacropus_eugenii
ENSMUSG00000024902	Mrpl11	92	89.773	ENSODEG00000014340	-	85	89.773	Octodon_degus
ENSMUSG00000024902	Mrpl11	92	90.960	ENSODEG00000017704	-	100	90.960	Octodon_degus
ENSMUSG00000024902	Mrpl11	73	64.085	ENSONIG00000005480	mrpl11	85	64.085	Oreochromis_niloticus
ENSMUSG00000024902	Mrpl11	100	90.104	ENSOCUG00000020926	MRPL11	100	90.104	Oryctolagus_cuniculus
ENSMUSG00000024902	Mrpl11	89	67.251	ENSORLG00000001990	mrpl11	88	67.251	Oryzias_latipes
ENSMUSG00000024902	Mrpl11	89	67.251	ENSORLG00020020145	mrpl11	88	67.251	Oryzias_latipes_hni
ENSMUSG00000024902	Mrpl11	89	67.251	ENSORLG00015009657	mrpl11	88	67.251	Oryzias_latipes_hsok
ENSMUSG00000024902	Mrpl11	89	66.667	ENSOMEG00000017598	mrpl11	88	66.667	Oryzias_melastigma
ENSMUSG00000024902	Mrpl11	94	88.889	ENSOGAG00000010448	MRPL11	90	88.889	Otolemur_garnettii
ENSMUSG00000024902	Mrpl11	100	90.625	ENSOARG00000005178	MRPL11	100	90.625	Ovis_aries
ENSMUSG00000024902	Mrpl11	100	87.500	ENSPPAG00000028194	MRPL11	100	87.500	Pan_paniscus
ENSMUSG00000024902	Mrpl11	100	91.146	ENSPPRG00000006994	MRPL11	100	91.146	Panthera_pardus
ENSMUSG00000024902	Mrpl11	100	91.146	ENSPTIG00000007086	MRPL11	100	91.146	Panthera_tigris_altaica
ENSMUSG00000024902	Mrpl11	100	87.500	ENSPTRG00000003924	MRPL11	100	87.500	Pan_troglodytes
ENSMUSG00000024902	Mrpl11	100	89.062	ENSPANG00000018675	MRPL11	100	89.062	Papio_anubis
ENSMUSG00000024902	Mrpl11	100	67.708	ENSPKIG00000024583	mrpl11	100	66.667	Paramormyrops_kingsleyae
ENSMUSG00000024902	Mrpl11	89	66.667	ENSPSIG00000003131	MRPL11	91	65.909	Pelodiscus_sinensis
ENSMUSG00000024902	Mrpl11	89	67.836	ENSPMGG00000017736	mrpl11	87	67.836	Periophthalmus_magnuspinnatus
ENSMUSG00000024902	Mrpl11	100	93.750	ENSPEMG00000013254	Mrpl11	100	93.750	Peromyscus_maniculatus_bairdii
ENSMUSG00000024902	Mrpl11	93	80.899	ENSPCIG00000008435	MRPL11	92	80.899	Phascolarctos_cinereus
ENSMUSG00000024902	Mrpl11	89	67.251	ENSPFOG00000009559	mrpl11	87	67.251	Poecilia_formosa
ENSMUSG00000024902	Mrpl11	89	66.667	ENSPLAG00000011291	mrpl11	87	66.667	Poecilia_latipinna
ENSMUSG00000024902	Mrpl11	55	63.208	ENSPMEG00000018314	mrpl11	75	63.208	Poecilia_mexicana
ENSMUSG00000024902	Mrpl11	89	53.801	ENSPREG00000008953	mrpl11	85	53.801	Poecilia_reticulata
ENSMUSG00000024902	Mrpl11	100	88.542	ENSPPYG00000003025	MRPL11	100	88.542	Pongo_abelii
ENSMUSG00000024902	Mrpl11	100	91.146	ENSPCAG00000008371	MRPL11	100	91.146	Procavia_capensis
ENSMUSG00000024902	Mrpl11	100	90.104	ENSPCOG00000013514	MRPL11	100	90.104	Propithecus_coquereli
ENSMUSG00000024902	Mrpl11	89	65.497	ENSPNYG00000013744	mrpl11	88	65.497	Pundamilia_nyererei
ENSMUSG00000024902	Mrpl11	89	67.251	ENSPNAG00000020525	mrpl11	90	67.251	Pygocentrus_nattereri
ENSMUSG00000024902	Mrpl11	100	95.312	ENSRNOG00000019970	mrpl11	100	95.312	Rattus_norvegicus
ENSMUSG00000024902	Mrpl11	100	88.542	ENSRBIG00000030370	MRPL11	100	88.542	Rhinopithecus_bieti
ENSMUSG00000024902	Mrpl11	95	87.978	ENSRROG00000036860	-	93	87.778	Rhinopithecus_roxellana
ENSMUSG00000024902	Mrpl11	100	88.542	ENSRROG00000041021	-	100	88.542	Rhinopithecus_roxellana
ENSMUSG00000024902	Mrpl11	72	39.869	YNL185C	MRPL19	94	39.869	Saccharomyces_cerevisiae
ENSMUSG00000024902	Mrpl11	100	86.979	ENSSBOG00000019968	MRPL11	100	86.979	Saimiri_boliviensis_boliviensis
ENSMUSG00000024902	Mrpl11	89	85.965	ENSSHAG00000009446	MRPL11	92	85.955	Sarcophilus_harrisii
ENSMUSG00000024902	Mrpl11	89	69.006	ENSSFOG00015009200	mrpl11	94	66.667	Scleropages_formosus
ENSMUSG00000024902	Mrpl11	89	64.327	ENSSMAG00000016343	mrpl11	88	64.327	Scophthalmus_maximus
ENSMUSG00000024902	Mrpl11	89	66.082	ENSSDUG00000018338	mrpl11	88	66.082	Seriola_dumerili
ENSMUSG00000024902	Mrpl11	89	66.082	ENSSLDG00000022855	mrpl11	88	66.082	Seriola_lalandi_dorsalis
ENSMUSG00000024902	Mrpl11	90	67.442	ENSSPAG00000006573	mrpl11	99	65.104	Stegastes_partitus
ENSMUSG00000024902	Mrpl11	100	92.188	ENSSSCG00000012943	MRPL11	100	92.188	Sus_scrofa
ENSMUSG00000024902	Mrpl11	68	67.939	ENSTRUG00000011804	mrpl11	75	67.939	Takifugu_rubripes
ENSMUSG00000024902	Mrpl11	68	66.412	ENSTNIG00000016824	mrpl11	85	66.412	Tetraodon_nigroviridis
ENSMUSG00000024902	Mrpl11	100	92.188	ENSTTRG00000002678	MRPL11	100	92.188	Tursiops_truncatus
ENSMUSG00000024902	Mrpl11	100	90.625	ENSUAMG00000014879	MRPL11	100	90.625	Ursus_americanus
ENSMUSG00000024902	Mrpl11	100	90.625	ENSUMAG00000011244	MRPL11	100	90.625	Ursus_maritimus
ENSMUSG00000024902	Mrpl11	94	86.667	ENSVPAG00000003170	MRPL11	94	86.667	Vicugna_pacos
ENSMUSG00000024902	Mrpl11	89	90.058	ENSVVUG00000027010	MRPL11	93	89.944	Vulpes_vulpes
ENSMUSG00000024902	Mrpl11	91	70.286	ENSXETG00000020574	mrpl11	100	67.708	Xenopus_tropicalis
ENSMUSG00000024902	Mrpl11	68	65.649	ENSXCOG00000015719	mrpl11	77	65.649	Xiphophorus_couchianus
ENSMUSG00000024902	Mrpl11	89	66.082	ENSXMAG00000023368	mrpl11	86	66.082	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000027	ribosomal large subunit assembly	21873635.	IBA	Process
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	ISO	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	21873635.	IBA	Process
GO:0006412	translation	-	ISO	Process
GO:0015934	large ribosomal subunit	21873635.	IBA	Component
GO:0019843	rRNA binding	21873635.	IBA	Function
GO:0070180	large ribosomal subunit rRNA binding	21873635.	IBA	Function