EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024925 (Gene tree)
Gene ID: 68209
Gene Symbol: Rnaseh2c
Alias: 1500026D16Rik
Full Name: ribonuclease H2%2C subunit C
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 1567 bases
Position: chr19:5601873-5603439
Accession: 1915459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000025864	RNase_H2_suC	PF08615.11	1.1e-24	1	1
ENSMUSP00000117615	RNase_H2_suC	PF08615.11	2.7e-10	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000025864	-	1126	-	ENSMUSP00000025864	166 (aa)	-	Q9CQ18
ENSMUST00000133953	-	271	-	-	- (aa)	-	-
ENSMUST00000136226	-	393	-	ENSMUSP00000117615	88 (aa)	-	F6ZDT4
ENSMUST00000155639	-	771	-	-	- (aa)	-	-
ENSMUST00000127071	-	869	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000024925's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024925's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024925	Rnaseh2c	100	65.663	ENSG00000172922	RNASEH2C	100	65.663	Homo_sapiens
ENSMUSG00000024925	Rnaseh2c	100	66.860	ENSAMEG00000017348	RNASEH2C	100	66.860	Ailuropoda_melanoleuca
ENSMUSG00000024925	Rnaseh2c	98	70.930	ENSANAG00000032535	RNASEH2C	100	67.470	Aotus_nancymaae
ENSMUSG00000024925	Rnaseh2c	100	65.060	ENSBTAG00000005577	RNASEH2C	100	65.060	Bos_taurus
ENSMUSG00000024925	Rnaseh2c	98	68.605	ENSCJAG00000001965	RNASEH2C	100	65.663	Callithrix_jacchus
ENSMUSG00000024925	Rnaseh2c	100	67.262	ENSCAFG00000013292	RNASEH2C	100	67.262	Canis_familiaris
ENSMUSG00000024925	Rnaseh2c	100	67.262	ENSCAFG00020015077	RNASEH2C	100	67.262	Canis_lupus_dingo
ENSMUSG00000024925	Rnaseh2c	100	65.060	ENSCHIG00000013681	RNASEH2C	100	65.060	Capra_hircus
ENSMUSG00000024925	Rnaseh2c	98	69.767	ENSTSYG00000028658	-	65	74.074	Carlito_syrichta
ENSMUSG00000024925	Rnaseh2c	100	64.458	ENSCPOG00000013696	RNASEH2C	100	64.458	Cavia_porcellus
ENSMUSG00000024925	Rnaseh2c	98	69.767	ENSCCAG00000025461	RNASEH2C	100	66.867	Cebus_capucinus
ENSMUSG00000024925	Rnaseh2c	99	70.122	ENSCLAG00000016534	RNASEH2C	99	72.121	Chinchilla_lanigera
ENSMUSG00000024925	Rnaseh2c	100	66.867	ENSCSAG00000007985	RNASEH2C	100	66.867	Chlorocebus_sabaeus
ENSMUSG00000024925	Rnaseh2c	100	65.663	ENSCANG00000039373	RNASEH2C	100	65.663	Colobus_angolensis_palliatus
ENSMUSG00000024925	Rnaseh2c	98	90.698	ENSCGRG00001015383	Rnaseh2c	100	86.145	Cricetulus_griseus_chok1gshd
ENSMUSG00000024925	Rnaseh2c	98	90.698	ENSCGRG00000012179	Rnaseh2c	100	86.145	Cricetulus_griseus_crigri
ENSMUSG00000024925	Rnaseh2c	100	66.272	ENSDNOG00000035155	RNASEH2C	99	67.456	Dasypus_novemcinctus
ENSMUSG00000024925	Rnaseh2c	100	70.482	ENSDORG00000023624	Rnaseh2c	100	70.482	Dipodomys_ordii
ENSMUSG00000024925	Rnaseh2c	98	58.427	ENSETEG00000020048	-	100	64.062	Echinops_telfairi
ENSMUSG00000024925	Rnaseh2c	60	58.000	ENSETEG00000015293	-	94	58.000	Echinops_telfairi
ENSMUSG00000024925	Rnaseh2c	100	63.855	ENSEASG00005004302	RNASEH2C	100	63.855	Equus_asinus_asinus
ENSMUSG00000024925	Rnaseh2c	100	64.458	ENSECAG00000017289	RNASEH2C	100	64.458	Equus_caballus
ENSMUSG00000024925	Rnaseh2c	100	71.687	ENSFCAG00000044095	RNASEH2C	100	71.687	Felis_catus
ENSMUSG00000024925	Rnaseh2c	98	66.279	ENSFDAG00000011974	RNASEH2C	97	60.819	Fukomys_damarensis
ENSMUSG00000024925	Rnaseh2c	100	68.072	ENSHGLG00000013478	RNASEH2C	100	68.072	Heterocephalus_glaber_female
ENSMUSG00000024925	Rnaseh2c	100	68.072	ENSHGLG00100019352	RNASEH2C	100	68.072	Heterocephalus_glaber_male
ENSMUSG00000024925	Rnaseh2c	100	69.364	ENSSTOG00000019410	RNASEH2C	100	69.364	Ictidomys_tridecemlineatus
ENSMUSG00000024925	Rnaseh2c	98	75.581	ENSJJAG00000019320	Rnaseh2c	94	77.564	Jaculus_jaculus
ENSMUSG00000024925	Rnaseh2c	100	63.314	ENSLAFG00000015641	RNASEH2C	100	63.314	Loxodonta_africana
ENSMUSG00000024925	Rnaseh2c	100	65.663	ENSMFAG00000042754	-	100	65.663	Macaca_fascicularis
ENSMUSG00000024925	Rnaseh2c	100	66.867	ENSMFAG00000038096	-	100	66.867	Macaca_fascicularis
ENSMUSG00000024925	Rnaseh2c	98	68.605	ENSMMUG00000019837	RNASEH2C	74	63.804	Macaca_mulatta
ENSMUSG00000024925	Rnaseh2c	100	66.867	ENSMMUG00000016234	-	100	66.867	Macaca_mulatta
ENSMUSG00000024925	Rnaseh2c	100	66.867	ENSMNEG00000040939	RNASEH2C	100	66.867	Macaca_nemestrina
ENSMUSG00000024925	Rnaseh2c	98	90.698	ENSMAUG00000016346	Rnaseh2c	100	87.952	Mesocricetus_auratus
ENSMUSG00000024925	Rnaseh2c	100	70.060	ENSMICG00000008882	RNASEH2C	100	70.060	Microcebus_murinus
ENSMUSG00000024925	Rnaseh2c	98	87.209	ENSMOCG00000013231	Rnaseh2c	100	84.940	Microtus_ochrogaster
ENSMUSG00000024925	Rnaseh2c	98	46.512	ENSMODG00000009547	-	90	50.000	Monodelphis_domestica
ENSMUSG00000024925	Rnaseh2c	100	96.386	MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	96.552	Mus_caroli
ENSMUSG00000024925	Rnaseh2c	100	97.590	MGP_PahariEiJ_G0014057	Rnaseh2c	100	97.590	Mus_pahari
ENSMUSG00000024925	Rnaseh2c	100	62.428	ENSMPUG00000011629	RNASEH2C	100	64.162	Mustela_putorius_furo
ENSMUSG00000024925	Rnaseh2c	100	62.130	ENSMLUG00000008777	RNASEH2C	100	62.130	Myotis_lucifugus
ENSMUSG00000024925	Rnaseh2c	100	66.265	ENSNGAG00000020391	Rnaseh2c	100	66.265	Nannospalax_galili
ENSMUSG00000024925	Rnaseh2c	98	68.605	ENSNLEG00000005833	-	100	65.060	Nomascus_leucogenys
ENSMUSG00000024925	Rnaseh2c	98	44.172	ENSMEUG00000006205	-	100	44.172	Notamacropus_eugenii
ENSMUSG00000024925	Rnaseh2c	100	67.470	ENSODEG00000017806	RNASEH2C	100	67.470	Octodon_degus
ENSMUSG00000024925	Rnaseh2c	100	68.208	ENSOGAG00000014128	RNASEH2C	100	68.208	Otolemur_garnettii
ENSMUSG00000024925	Rnaseh2c	100	64.458	ENSOARG00000017675	RNASEH2C	100	64.458	Ovis_aries
ENSMUSG00000024925	Rnaseh2c	98	67.442	ENSPPAG00000042592	-	84	62.874	Pan_paniscus
ENSMUSG00000024925	Rnaseh2c	100	71.084	ENSPPRG00000000774	RNASEH2C	100	71.084	Panthera_pardus
ENSMUSG00000024925	Rnaseh2c	100	68.072	ENSPTIG00000011677	RNASEH2C	100	68.072	Panthera_tigris_altaica
ENSMUSG00000024925	Rnaseh2c	100	66.265	ENSPTRG00000038742	RNASEH2C	100	66.265	Pan_troglodytes
ENSMUSG00000024925	Rnaseh2c	98	68.605	ENSPANG00000015965	RNASEH2C	66	63.636	Papio_anubis
ENSMUSG00000024925	Rnaseh2c	98	93.023	ENSPEMG00000018577	Rnaseh2c	100	87.952	Peromyscus_maniculatus_bairdii
ENSMUSG00000024925	Rnaseh2c	98	68.605	ENSPPYG00000003051	RNASEH2C	100	65.060	Pongo_abelii
ENSMUSG00000024925	Rnaseh2c	100	62.209	ENSPCAG00000007887	RNASEH2C	100	62.209	Procavia_capensis
ENSMUSG00000024925	Rnaseh2c	100	70.060	ENSPCOG00000021092	RNASEH2C	100	70.060	Propithecus_coquereli
ENSMUSG00000024925	Rnaseh2c	100	67.470	ENSPVAG00000016950	RNASEH2C	100	67.470	Pteropus_vampyrus
ENSMUSG00000024925	Rnaseh2c	98	97.674	ENSRNOG00000020700	Rnaseh2c	100	95.181	Rattus_norvegicus
ENSMUSG00000024925	Rnaseh2c	98	69.767	ENSRBIG00000040124	RNASEH2C	64	65.409	Rhinopithecus_bieti
ENSMUSG00000024925	Rnaseh2c	98	69.767	ENSRROG00000044910	RNASEH2C	99	65.823	Rhinopithecus_roxellana
ENSMUSG00000024925	Rnaseh2c	100	67.470	ENSSBOG00000034781	RNASEH2C	100	67.470	Saimiri_boliviensis_boliviensis
ENSMUSG00000024925	Rnaseh2c	100	66.071	ENSSSCG00000012979	RNASEH2C	100	66.071	Sus_scrofa
ENSMUSG00000024925	Rnaseh2c	97	49.697	ENSTTRG00000016928	RNASEH2C	99	49.697	Tursiops_truncatus
ENSMUSG00000024925	Rnaseh2c	100	66.279	ENSUAMG00000020793	RNASEH2C	100	66.279	Ursus_americanus
ENSMUSG00000024925	Rnaseh2c	100	65.698	ENSUMAG00000010791	RNASEH2C	100	65.698	Ursus_maritimus
ENSMUSG00000024925	Rnaseh2c	98	63.953	ENSVPAG00000006579	RNASEH2C	100	59.494	Vicugna_pacos
ENSMUSG00000024925	Rnaseh2c	96	63.354	ENSVVUG00000027076	RNASEH2C	77	63.354	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0006401	RNA catabolic process	-	ISO	Process
GO:0032299	ribonuclease H2 complex	19923215.	IDA	Component
GO:0032299	ribonuclease H2 complex	-	ISO	Component