EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024941 (Gene tree)
Gene ID: 78891
Gene Symbol: Scyl1
Alias: 2810011O19Rik|Ntkl|mdf|mfd|p105
Full Name: SCY1-like 1 (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 12975
Position: chr19: 5758427-5771401
Accession: 1931787
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000025890	-	2637	XM_006531856	ENSMUSP00000025890	806 (aa)	-	Q9EQC5

Gene Model

Click here to download ENSMUSG00000024941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024941's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024941	Scyl1	100	90.741	ENSG00000142186	SCYL1	100	90.741	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004672	protein kinase activity	-	IEA	Function
GO:0005515	protein binding	12783284.18556652.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	12783284.	IDA	Component
GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	-	ISO	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0005801	cis-Golgi network	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0006468	protein phosphorylation	-	IEA	Process
GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	-	ISO	Process
GO:0016192	vesicle-mediated transport	-	IEA	Process
GO:0030126	COPI vesicle coat	18556652.	IDA	Component
GO:0030126	COPI vesicle coat	-	ISO	Component