EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024960 (Gene tree)
Gene ID: 18797
Gene Symbol: Plcb3
Alias: -
Full Name: phospholipase C%2C beta 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 16046
Position: chr19: 6953714-6969759
Accession: 104778
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000025912	-	4201	XM_006526766	ENSMUSP00000025912	1234 (aa)	XP_006526829	P51432

Gene Model

Click here to download ENSMUSG00000024960's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00562	Inositol phosphate metabolism	KEGG
mmu01100	Metabolic pathways	KEGG
mmu04015	Rap1 signaling pathway	KEGG
mmu04020	Calcium signaling pathway	KEGG
mmu04022	cGMP-PKG signaling pathway	KEGG
mmu04062	Chemokine signaling pathway	KEGG
mmu04070	Phosphatidylinositol signaling system	KEGG
mmu04071	Sphingolipid signaling pathway	KEGG
mmu04072	Phospholipase D signaling pathway	KEGG
mmu04261	Adrenergic signaling in cardiomyocytes	KEGG
mmu04270	Vascular smooth muscle contraction	KEGG
mmu04310	Wnt signaling pathway	KEGG
mmu04371	Apelin signaling pathway	KEGG
mmu04540	Gap junction	KEGG
mmu04611	Platelet activation	KEGG
mmu04621	NOD-like receptor signaling pathway	KEGG
mmu04713	Circadian entrainment	KEGG
mmu04720	Long-term potentiation	KEGG
mmu04723	Retrograde endocannabinoid signaling	KEGG
mmu04724	Glutamatergic synapse	KEGG
mmu04725	Cholinergic synapse	KEGG
mmu04726	Serotonergic synapse	KEGG
mmu04728	Dopaminergic synapse	KEGG
mmu04730	Long-term depression	KEGG
mmu04750	Inflammatory mediator regulation of TRP channels	KEGG
mmu04911	Insulin secretion	KEGG
mmu04912	GnRH signaling pathway	KEGG
mmu04915	Estrogen signaling pathway	KEGG
mmu04916	Melanogenesis	KEGG
mmu04918	Thyroid hormone synthesis	KEGG
mmu04919	Thyroid hormone signaling pathway	KEGG
mmu04921	Oxytocin signaling pathway	KEGG
mmu04922	Glucagon signaling pathway	KEGG
mmu04924	Renin secretion	KEGG
mmu04925	Aldosterone synthesis and secretion	KEGG
mmu04926	Relaxin signaling pathway	KEGG
mmu04927	Cortisol synthesis and secretion	KEGG
mmu04928	Parathyroid hormone synthesis, secretion and action	KEGG
mmu04933	AGE-RAGE signaling pathway in diabetic complications	KEGG
mmu04934	Cushing syndrome	KEGG
mmu04961	Endocrine and other factor-regulated calcium reabsorption	KEGG
mmu04970	Salivary secretion	KEGG
mmu04971	Gastric acid secretion	KEGG
mmu04972	Pancreatic secretion	KEGG
mmu05010	Alzheimer disease	KEGG
mmu05016	Huntington disease	KEGG
mmu05142	Chagas disease (American trypanosomiasis)	KEGG
mmu05143	African trypanosomiasis	KEGG
mmu05146	Amoebiasis	KEGG
mmu05163	Human cytomegalovirus infection	KEGG
mmu05200	Pathways in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024960's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024960	Plcb3	100	92.227	ENSG00000149782	PLCB3	100	92.227	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003073	regulation of systemic arterial blood pressure	18468998.	ISO	Process
GO:0004435	phosphatidylinositol phospholipase C activity	21873635.	IBA	Function
GO:0004435	phosphatidylinositol phospholipase C activity	-	ISO	Function
GO:0005509	calcium ion binding	-	IEA	Function
GO:0005515	protein binding	21873635.	IBA	Function
GO:0005516	calmodulin binding	21873635.	IBA	Function
GO:0005516	calmodulin binding	-	ISO	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006629	lipid metabolic process	-	IEA	Process
GO:0006892	post-Golgi vesicle-mediated transport	-	ISO	Process
GO:0007165	signal transduction	-	IEA	Process
GO:0007186	G protein-coupled receptor signaling pathway	-	ISO	Process
GO:0008081	phosphoric diester hydrolase activity	-	IEA	Function
GO:0016042	lipid catabolic process	-	IEA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0031161	phosphatidylinositol catabolic process	-	ISO	Process
GO:0032957	inositol trisphosphate metabolic process	-	ISO	Process
GO:0032959	inositol trisphosphate biosynthetic process	21873635.	IBA	Process
GO:0032991	protein-containing complex	18468998.	ISO	Component
GO:0035556	intracellular signal transduction	-	IEA	Process
GO:0042383	sarcolemma	-	ISO	Component
GO:0048015	phosphatidylinositol-mediated signaling	21873635.	IBA	Process
GO:0048015	phosphatidylinositol-mediated signaling	-	ISO	Process
GO:0051209	release of sequestered calcium ion into cytosol	21873635.	IBA	Process
GO:0099524	postsynaptic cytosol	17298601.	IDA	Component