EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000025081 (Gene tree)
Gene ID: 83561
Gene Symbol: Tdrd1
Alias: MTR-1
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 43804 bases
Position: chr19:56826209-56870012
Accession: 1933218
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000077785	TUDOR	PF00567.24	1.4e-128	1	4
ENSMUSP00000077785	TUDOR	PF00567.24	1.4e-128	2	4
ENSMUSP00000077785	TUDOR	PF00567.24	1.4e-128	3	4
ENSMUSP00000077785	TUDOR	PF00567.24	1.4e-128	4	4
ENSMUSP00000107231	TUDOR	PF00567.24	1.4e-128	1	4
ENSMUSP00000107231	TUDOR	PF00567.24	1.4e-128	2	4
ENSMUSP00000107231	TUDOR	PF00567.24	1.4e-128	3	4
ENSMUSP00000107231	TUDOR	PF00567.24	1.4e-128	4	4
ENSMUSP00000107233	TUDOR	PF00567.24	1.4e-128	1	4
ENSMUSP00000107233	TUDOR	PF00567.24	1.4e-128	2	4
ENSMUSP00000107233	TUDOR	PF00567.24	1.4e-128	3	4
ENSMUSP00000107233	TUDOR	PF00567.24	1.4e-128	4	4
ENSMUSP00000112786	TUDOR	PF00567.24	1.4e-128	1	4
ENSMUSP00000112786	TUDOR	PF00567.24	1.4e-128	2	4
ENSMUSP00000112786	TUDOR	PF00567.24	1.4e-128	3	4
ENSMUSP00000112786	TUDOR	PF00567.24	1.4e-128	4	4

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000078723	-	4887	XM_006527475	ENSMUSP00000077785	1172 (aa)	XP_006527538	Q99MV1
ENSMUST00000111604	-	5187	XM_006527476	ENSMUSP00000107231	1172 (aa)	XP_006527539	Q99MV1
ENSMUST00000121249	-	5047	XM_006527474	ENSMUSP00000112786	1172 (aa)	XP_006527537	Q99MV1
ENSMUST00000111606	-	4914	XM_006527473	ENSMUSP00000107233	1172 (aa)	XP_006527536	Q99MV1

Gene Model

Click here to download ENSMUSG00000025081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000025081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000025081	Tdrd1	99	71.806	ENSG00000095627	TDRD1	99	71.429	Homo_sapiens
ENSMUSG00000025081	Tdrd1	88	32.299	ENSAPOG00000023199	tdrd1	93	32.208	Acanthochromis_polyacanthus
ENSMUSG00000025081	Tdrd1	100	72.511	ENSAMEG00000015182	TDRD1	99	72.511	Ailuropoda_melanoleuca
ENSMUSG00000025081	Tdrd1	84	34.476	ENSACIG00000010576	tdrd1	85	34.476	Amphilophus_citrinellus
ENSMUSG00000025081	Tdrd1	86	34.411	ENSAOCG00000007059	tdrd1	88	31.952	Amphiprion_ocellaris
ENSMUSG00000025081	Tdrd1	87	32.392	ENSAPEG00000017049	tdrd1	90	32.298	Amphiprion_percula
ENSMUSG00000025081	Tdrd1	88	34.195	ENSATEG00000021627	tdrd1	88	34.100	Anabas_testudineus
ENSMUSG00000025081	Tdrd1	89	44.877	ENSAPLG00000012609	TDRD1	99	44.877	Anas_platyrhynchos
ENSMUSG00000025081	Tdrd1	99	37.351	ENSACAG00000009854	TDRD1	99	37.351	Anolis_carolinensis
ENSMUSG00000025081	Tdrd1	99	70.784	ENSANAG00000035710	TDRD1	99	70.784	Aotus_nancymaae
ENSMUSG00000025081	Tdrd1	86	33.964	ENSACLG00000014107	tdrd1	84	34.111	Astatotilapia_calliptera
ENSMUSG00000025081	Tdrd1	88	33.488	ENSAMXG00000015146	tdrd1	91	33.395	Astyanax_mexicanus
ENSMUSG00000025081	Tdrd1	99	73.469	ENSBTAG00000006855	TDRD1	99	73.469	Bos_taurus
ENSMUSG00000025081	Tdrd1	98	82.051	ENSCJAG00000019270	TDRD1	99	82.051	Callithrix_jacchus
ENSMUSG00000025081	Tdrd1	100	71.915	ENSCAFG00000011266	TDRD1	100	71.915	Canis_familiaris
ENSMUSG00000025081	Tdrd1	98	85.000	ENSCAFG00020012373	TDRD1	99	85.000	Canis_lupus_dingo
ENSMUSG00000025081	Tdrd1	100	71.671	ENSCHIG00000012766	TDRD1	99	71.671	Capra_hircus
ENSMUSG00000025081	Tdrd1	98	89.474	ENSTSYG00000004935	TDRD1	98	89.474	Carlito_syrichta
ENSMUSG00000025081	Tdrd1	100	67.234	ENSCPOG00000004190	TDRD1	100	67.574	Cavia_porcellus
ENSMUSG00000025081	Tdrd1	100	71.429	ENSCCAG00000027375	TDRD1	99	71.429	Cebus_capucinus
ENSMUSG00000025081	Tdrd1	99	71.550	ENSCATG00000035999	TDRD1	99	71.291	Cercocebus_atys
ENSMUSG00000025081	Tdrd1	99	72.061	ENSCLAG00000003935	TDRD1	99	72.061	Chinchilla_lanigera
ENSMUSG00000025081	Tdrd1	99	71.295	ENSCSAG00000005071	TDRD1	98	71.295	Chlorocebus_sabaeus
ENSMUSG00000025081	Tdrd1	99	80.952	ENSCHOG00000001690	TDRD1	92	80.952	Choloepus_hoffmanni
ENSMUSG00000025081	Tdrd1	99	49.585	ENSCPBG00000003780	TDRD1	99	48.949	Chrysemys_picta_bellii
ENSMUSG00000025081	Tdrd1	99	70.443	ENSCANG00000035172	TDRD1	99	70.443	Colobus_angolensis_palliatus
ENSMUSG00000025081	Tdrd1	96	83.635	ENSCGRG00001004632	Tdrd1	100	83.635	Cricetulus_griseus_chok1gshd
ENSMUSG00000025081	Tdrd1	100	82.027	ENSCGRG00000004981	Tdrd1	100	82.027	Cricetulus_griseus_crigri
ENSMUSG00000025081	Tdrd1	85	32.207	ENSCSEG00000006983	tdrd1	91	32.749	Cynoglossus_semilaevis
ENSMUSG00000025081	Tdrd1	85	32.782	ENSCVAG00000020980	tdrd1	91	33.092	Cyprinodon_variegatus
ENSMUSG00000025081	Tdrd1	83	36.825	ENSDARG00000007465	tdrd1	81	36.714	Danio_rerio
ENSMUSG00000025081	Tdrd1	100	69.558	ENSDNOG00000012114	TDRD1	99	69.558	Dasypus_novemcinctus
ENSMUSG00000025081	Tdrd1	100	72.642	ENSDORG00000009986	Tdrd1	100	72.642	Dipodomys_ordii
ENSMUSG00000025081	Tdrd1	90	66.042	ENSETEG00000020143	TDRD1	83	66.042	Echinops_telfairi
ENSMUSG00000025081	Tdrd1	99	71.429	ENSEASG00005014802	TDRD1	99	71.429	Equus_asinus_asinus
ENSMUSG00000025081	Tdrd1	99	74.609	ENSECAG00000009748	TDRD1	96	74.609	Equus_caballus
ENSMUSG00000025081	Tdrd1	99	68.116	ENSEEUG00000010076	TDRD1	98	68.116	Erinaceus_europaeus
ENSMUSG00000025081	Tdrd1	88	34.612	ENSELUG00000024364	tdrd1	89	34.360	Esox_lucius
ENSMUSG00000025081	Tdrd1	98	87.179	ENSFCAG00000000632	TDRD1	98	87.179	Felis_catus
ENSMUSG00000025081	Tdrd1	78	44.979	ENSFALG00000002237	TDRD1	99	41.897	Ficedula_albicollis
ENSMUSG00000025081	Tdrd1	99	71.880	ENSFDAG00000013225	TDRD1	99	71.880	Fukomys_damarensis
ENSMUSG00000025081	Tdrd1	84	33.333	ENSFHEG00000009203	tdrd1	95	33.333	Fundulus_heteroclitus
ENSMUSG00000025081	Tdrd1	70	34.286	ENSGMOG00000016797	-	68	34.286	Gadus_morhua
ENSMUSG00000025081	Tdrd1	89	44.126	ENSGALG00000046180	TDRD1	96	44.126	Gallus_gallus
ENSMUSG00000025081	Tdrd1	86	32.996	ENSGAFG00000002668	tdrd1	94	32.904	Gambusia_affinis
ENSMUSG00000025081	Tdrd1	79	36.797	ENSGACG00000006590	tdrd1	99	36.675	Gasterosteus_aculeatus
ENSMUSG00000025081	Tdrd1	99	71.976	ENSGGOG00000004250	TDRD1	98	71.976	Gorilla_gorilla
ENSMUSG00000025081	Tdrd1	84	34.694	ENSHBUG00000005216	tdrd1	83	34.597	Haplochromis_burtoni
ENSMUSG00000025081	Tdrd1	100	67.517	ENSHGLG00000010877	TDRD1	100	67.517	Heterocephalus_glaber_female
ENSMUSG00000025081	Tdrd1	95	71.537	ENSHGLG00100013857	TDRD1	99	71.537	Heterocephalus_glaber_male
ENSMUSG00000025081	Tdrd1	88	30.711	ENSHCOG00000002840	tdrd1	90	31.139	Hippocampus_comes
ENSMUSG00000025081	Tdrd1	86	35.010	ENSIPUG00000017232	tdrd1	88	35.132	Ictalurus_punctatus
ENSMUSG00000025081	Tdrd1	99	75.510	ENSSTOG00000003221	TDRD1	99	75.510	Ictidomys_tridecemlineatus
ENSMUSG00000025081	Tdrd1	100	73.657	ENSJJAG00000014720	Tdrd1	100	73.657	Jaculus_jaculus
ENSMUSG00000025081	Tdrd1	82	33.638	ENSKMAG00000018558	tdrd1	91	33.537	Kryptolebias_marmoratus
ENSMUSG00000025081	Tdrd1	91	34.006	ENSLBEG00000004161	tdrd1	85	34.100	Labrus_bergylta
ENSMUSG00000025081	Tdrd1	97	42.128	ENSLACG00000011559	TDRD1	99	42.128	Latimeria_chalumnae
ENSMUSG00000025081	Tdrd1	87	35.831	ENSLOCG00000012030	tdrd1	100	37.823	Lepisosteus_oculatus
ENSMUSG00000025081	Tdrd1	79	71.536	ENSLAFG00000011575	TDRD1	100	71.536	Loxodonta_africana
ENSMUSG00000025081	Tdrd1	100	71.574	ENSMFAG00000043487	TDRD1	99	71.574	Macaca_fascicularis
ENSMUSG00000025081	Tdrd1	99	71.635	ENSMMUG00000022517	TDRD1	98	71.635	Macaca_mulatta
ENSMUSG00000025081	Tdrd1	100	71.404	ENSMNEG00000031108	TDRD1	99	71.404	Macaca_nemestrina
ENSMUSG00000025081	Tdrd1	99	71.550	ENSMLEG00000032281	TDRD1	99	70.833	Mandrillus_leucophaeus
ENSMUSG00000025081	Tdrd1	85	35.340	ENSMAMG00000015287	tdrd1	91	35.243	Mastacembelus_armatus
ENSMUSG00000025081	Tdrd1	84	34.500	ENSMZEG00005025315	tdrd1	84	34.402	Maylandia_zebra
ENSMUSG00000025081	Tdrd1	85	58.974	ENSMGAG00000011067	TDRD1	99	58.974	Meleagris_gallopavo
ENSMUSG00000025081	Tdrd1	90	81.727	ENSMAUG00000012164	Tdrd1	95	81.727	Mesocricetus_auratus
ENSMUSG00000025081	Tdrd1	98	87.179	ENSMICG00000016190	TDRD1	98	87.179	Microcebus_murinus
ENSMUSG00000025081	Tdrd1	100	82.158	ENSMOCG00000022360	Tdrd1	100	82.158	Microtus_ochrogaster
ENSMUSG00000025081	Tdrd1	80	34.796	ENSMMOG00000014068	tdrd1	83	34.694	Mola_mola
ENSMUSG00000025081	Tdrd1	99	60.373	ENSMODG00000009788	TDRD1	99	60.373	Monodelphis_domestica
ENSMUSG00000025081	Tdrd1	85	34.532	ENSMALG00000022115	tdrd1	88	34.688	Monopterus_albus
ENSMUSG00000025081	Tdrd1	100	96.505	MGP_CAROLIEiJ_G0023095	Tdrd1	100	96.505	Mus_caroli
ENSMUSG00000025081	Tdrd1	100	92.839	MGP_PahariEiJ_G0014583	Tdrd1	100	92.839	Mus_pahari
ENSMUSG00000025081	Tdrd1	100	98.208	MGP_SPRETEiJ_G0024016	Tdrd1	100	98.208	Mus_spretus
ENSMUSG00000025081	Tdrd1	100	70.314	ENSMPUG00000001987	TDRD1	99	70.314	Mustela_putorius_furo
ENSMUSG00000025081	Tdrd1	100	78.535	ENSNGAG00000015231	Tdrd1	100	78.535	Nannospalax_galili
ENSMUSG00000025081	Tdrd1	82	34.469	ENSNBRG00000017920	tdrd1	84	34.469	Neolamprologus_brichardi
ENSMUSG00000025081	Tdrd1	100	68.825	ENSNLEG00000016228	TDRD1	99	68.825	Nomascus_leucogenys
ENSMUSG00000025081	Tdrd1	99	58.185	ENSMEUG00000007717	TDRD1	99	58.185	Notamacropus_eugenii
ENSMUSG00000025081	Tdrd1	99	68.228	ENSOPRG00000009180	TDRD1	99	68.228	Ochotona_princeps
ENSMUSG00000025081	Tdrd1	100	68.851	ENSODEG00000011965	TDRD1	100	68.851	Octodon_degus
ENSMUSG00000025081	Tdrd1	87	34.318	ENSONIG00000016382	tdrd1	87	34.318	Oreochromis_niloticus
ENSMUSG00000025081	Tdrd1	99	52.321	ENSOANG00000001562	TDRD1	99	51.808	Ornithorhynchus_anatinus
ENSMUSG00000025081	Tdrd1	99	71.502	ENSOCUG00000025327	TDRD1	100	71.502	Oryctolagus_cuniculus
ENSMUSG00000025081	Tdrd1	89	33.973	ENSORLG00000004833	tdrd1	89	34.071	Oryzias_latipes
ENSMUSG00000025081	Tdrd1	84	35.324	ENSORLG00020019231	tdrd1	92	35.223	Oryzias_latipes_hni
ENSMUSG00000025081	Tdrd1	87	34.360	ENSORLG00015017184	tdrd1	89	34.264	Oryzias_latipes_hsok
ENSMUSG00000025081	Tdrd1	83	34.412	ENSOMEG00000023637	tdrd1	83	34.314	Oryzias_melastigma
ENSMUSG00000025081	Tdrd1	100	73.106	ENSOGAG00000001370	TDRD1	99	73.106	Otolemur_garnettii
ENSMUSG00000025081	Tdrd1	100	71.198	ENSOARG00000014200	-	98	71.198	Ovis_aries
ENSMUSG00000025081	Tdrd1	99	71.806	ENSPPAG00000041621	TDRD1	99	70.833	Pan_paniscus
ENSMUSG00000025081	Tdrd1	98	87.179	ENSPPRG00000000191	TDRD1	98	87.179	Panthera_pardus
ENSMUSG00000025081	Tdrd1	98	87.500	ENSPTIG00000010264	TDRD1	99	87.500	Panthera_tigris_altaica
ENSMUSG00000025081	Tdrd1	99	71.976	ENSPTRG00000002958	TDRD1	98	71.976	Pan_troglodytes
ENSMUSG00000025081	Tdrd1	99	71.380	ENSPANG00000020752	TDRD1	99	71.117	Papio_anubis
ENSMUSG00000025081	Tdrd1	85	34.813	ENSPKIG00000010586	tdrd1	91	34.714	Paramormyrops_kingsleyae
ENSMUSG00000025081	Tdrd1	99	50.503	ENSPSIG00000014655	TDRD1	99	50.503	Pelodiscus_sinensis
ENSMUSG00000025081	Tdrd1	80	33.114	ENSPMGG00000018890	tdrd1	98	33.004	Periophthalmus_magnuspinnatus
ENSMUSG00000025081	Tdrd1	100	83.901	ENSPEMG00000004582	Tdrd1	100	83.901	Peromyscus_maniculatus_bairdii
ENSMUSG00000025081	Tdrd1	98	82.500	ENSPCIG00000009739	TDRD1	99	82.500	Phascolarctos_cinereus
ENSMUSG00000025081	Tdrd1	81	34.004	ENSPFOG00000002145	tdrd1	86	33.898	Poecilia_formosa
ENSMUSG00000025081	Tdrd1	89	33.301	ENSPLAG00000010241	tdrd1	88	33.206	Poecilia_latipinna
ENSMUSG00000025081	Tdrd1	89	33.591	ENSPMEG00000021893	tdrd1	89	33.591	Poecilia_mexicana
ENSMUSG00000025081	Tdrd1	86	33.558	ENSPREG00000022663	tdrd1	87	33.590	Poecilia_reticulata
ENSMUSG00000025081	Tdrd1	99	69.080	ENSPPYG00000002671	TDRD1	98	69.080	Pongo_abelii
ENSMUSG00000025081	Tdrd1	97	62.914	ENSPCAG00000006692	TDRD1	96	62.914	Procavia_capensis
ENSMUSG00000025081	Tdrd1	99	77.083	ENSPCOG00000026619	TDRD1	98	77.083	Propithecus_coquereli
ENSMUSG00000025081	Tdrd1	97	71.741	ENSPVAG00000003055	TDRD1	99	70.478	Pteropus_vampyrus
ENSMUSG00000025081	Tdrd1	82	34.835	ENSPNYG00000001706	tdrd1	83	34.735	Pundamilia_nyererei
ENSMUSG00000025081	Tdrd1	79	36.184	ENSPNAG00000005831	tdrd1	83	36.315	Pygocentrus_nattereri
ENSMUSG00000025081	Tdrd1	100	87.564	ENSRNOG00000017064	Tdrd1	100	87.564	Rattus_norvegicus
ENSMUSG00000025081	Tdrd1	98	71.252	ENSRBIG00000029668	TDRD1	97	71.252	Rhinopithecus_bieti
ENSMUSG00000025081	Tdrd1	100	70.723	ENSRROG00000043379	TDRD1	99	70.723	Rhinopithecus_roxellana
ENSMUSG00000025081	Tdrd1	99	71.210	ENSSBOG00000023561	TDRD1	99	69.447	Saimiri_boliviensis_boliviensis
ENSMUSG00000025081	Tdrd1	99	60.961	ENSSHAG00000014311	TDRD1	99	60.961	Sarcophilus_harrisii
ENSMUSG00000025081	Tdrd1	80	35.565	ENSSFOG00015022020	tdrd1	91	35.460	Scleropages_formosus
ENSMUSG00000025081	Tdrd1	83	34.442	ENSSMAG00000019271	tdrd1	88	34.344	Scophthalmus_maximus
ENSMUSG00000025081	Tdrd1	86	34.342	ENSSDUG00000022012	tdrd1	92	34.248	Seriola_dumerili
ENSMUSG00000025081	Tdrd1	86	34.149	ENSSLDG00000006423	tdrd1	95	34.055	Seriola_lalandi_dorsalis
ENSMUSG00000025081	Tdrd1	99	70.197	ENSSARG00000008828	TDRD1	82	70.197	Sorex_araneus
ENSMUSG00000025081	Tdrd1	99	44.568	ENSSPUG00000005015	TDRD1	99	44.568	Sphenodon_punctatus
ENSMUSG00000025081	Tdrd1	87	32.919	ENSSPAG00000018805	tdrd1	88	32.823	Stegastes_partitus
ENSMUSG00000025081	Tdrd1	100	72.000	ENSSSCG00000021075	TDRD1	99	72.000	Sus_scrofa
ENSMUSG00000025081	Tdrd1	78	45.506	ENSTGUG00000010905	TDRD1	99	45.506	Taeniopygia_guttata
ENSMUSG00000025081	Tdrd1	83	32.324	ENSTRUG00000012142	tdrd1	99	32.590	Takifugu_rubripes
ENSMUSG00000025081	Tdrd1	79	36.765	ENSTNIG00000018898	tdrd1	100	33.995	Tetraodon_nigroviridis
ENSMUSG00000025081	Tdrd1	99	66.638	ENSTBEG00000014417	-	98	66.638	Tupaia_belangeri
ENSMUSG00000025081	Tdrd1	85	71.628	ENSTBEG00000014978	-	55	71.628	Tupaia_belangeri
ENSMUSG00000025081	Tdrd1	99	69.421	ENSTTRG00000010147	TDRD1	99	69.421	Tursiops_truncatus
ENSMUSG00000025081	Tdrd1	98	87.500	ENSUAMG00000009025	TDRD1	99	87.500	Ursus_americanus
ENSMUSG00000025081	Tdrd1	98	87.500	ENSUMAG00000000705	TDRD1	99	87.500	Ursus_maritimus
ENSMUSG00000025081	Tdrd1	99	70.528	ENSVPAG00000004000	TDRD1	98	70.528	Vicugna_pacos
ENSMUSG00000025081	Tdrd1	100	71.915	ENSVVUG00000009750	TDRD1	100	71.915	Vulpes_vulpes
ENSMUSG00000025081	Tdrd1	74	34.663	ENSXCOG00000006412	tdrd1	91	34.539	Xiphophorus_couchianus
ENSMUSG00000025081	Tdrd1	84	33.959	ENSXMAG00000008104	tdrd1	91	33.589	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	16787967.17141210.19465913.19730684.	IPI	Function
GO:0005737	cytoplasm	14550528.17141210.	IDA	Component
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007281	germ cell development	17038506.	IMP	Process
GO:0007283	spermatogenesis	17038506.19465913.	IMP	Process
GO:0030154	cell differentiation	-	IEA	Process
GO:0031047	gene silencing by RNA	19465913.	IMP	Process
GO:0033391	chromatoid body	17141210.	IDA	Component
GO:0034587	piRNA metabolic process	19465913.	IMP	Process
GO:0043046	DNA methylation involved in gamete generation	19465913.	IMP	Process
GO:0043186	P granule	17038506.19465913.20439430.	IDA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0051321	meiotic cell cycle	-	IEA	Process
GO:0071546	pi-body	19861488.20011505.20059948.	IDA	Component
GO:1990904	ribonucleoprotein complex	17141210.	IDA	Component