EuRBPDB

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000026072	-	4300	XM_006527357	ENSMUSP00000026072	247 (aa)	XP_006527420	Q8C0D0
ENSMUST00000026073	-	3795	XM_006527356	ENSMUSP00000026073	338 (aa)	XP_006527419	Q8C0D0

Gene Model

Click here to download ENSMUSG00000025086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000025086's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000025086	Trub1	57	30.055	ENSMUSG00000039826	Trub2	87	30.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000025086	Trub1	99	79.943	ENSG00000165832	TRUB1	99	79.943	Homo_sapiens
ENSMUSG00000025086	Trub1	74	68.306	ENSAPOG00000020565	trub1	90	67.611	Acanthochromis_polyacanthus
ENSMUSG00000025086	Trub1	89	84.488	ENSAMEG00000014931	TRUB1	99	80.057	Ailuropoda_melanoleuca
ENSMUSG00000025086	Trub1	76	58.289	ENSACIG00000003060	trub1	81	61.570	Amphilophus_citrinellus
ENSMUSG00000025086	Trub1	75	66.667	ENSAOCG00000017188	trub1	88	68.182	Amphiprion_ocellaris
ENSMUSG00000025086	Trub1	79	64.796	ENSAPEG00000015209	trub1	88	67.769	Amphiprion_percula
ENSMUSG00000025086	Trub1	76	67.380	ENSATEG00000023291	trub1	85	67.647	Anabas_testudineus
ENSMUSG00000025086	Trub1	81	71.168	ENSAPLG00000006808	TRUB1	96	71.536	Anas_platyrhynchos
ENSMUSG00000025086	Trub1	81	68.000	ENSACAG00000009282	TRUB1	96	68.302	Anolis_carolinensis
ENSMUSG00000025086	Trub1	89	86.000	ENSANAG00000022870	TRUB1	99	79.656	Aotus_nancymaae
ENSMUSG00000025086	Trub1	79	63.590	ENSACLG00000000823	trub1	89	65.726	Astatotilapia_calliptera
ENSMUSG00000025086	Trub1	77	64.479	ENSAMXG00000015845	trub1	85	65.098	Astyanax_mexicanus
ENSMUSG00000025086	Trub1	89	84.768	ENSBTAG00000012955	TRUB1	100	78.693	Bos_taurus
ENSMUSG00000025086	Trub1	99	79.143	ENSCJAG00000047815	TRUB1	99	79.429	Callithrix_jacchus
ENSMUSG00000025086	Trub1	88	86.486	ENSCAFG00000011688	TRUB1	99	80.229	Canis_familiaris
ENSMUSG00000025086	Trub1	89	85.714	ENSCAFG00020013237	TRUB1	99	80.516	Canis_lupus_dingo
ENSMUSG00000025086	Trub1	89	85.099	ENSCHIG00000020884	TRUB1	100	78.348	Capra_hircus
ENSMUSG00000025086	Trub1	89	85.050	ENSTSYG00000000446	TRUB1	99	78.857	Carlito_syrichta
ENSMUSG00000025086	Trub1	66	87.037	ENSCAPG00000017088	TRUB1	99	75.494	Cavia_aperea
ENSMUSG00000025086	Trub1	98	77.733	ENSCPOG00000030129	-	90	73.279	Cavia_porcellus
ENSMUSG00000025086	Trub1	94	77.869	ENSCPOG00000040236	-	100	78.689	Cavia_porcellus
ENSMUSG00000025086	Trub1	89	85.714	ENSCCAG00000028842	TRUB1	99	79.429	Cebus_capucinus
ENSMUSG00000025086	Trub1	99	78.797	ENSCATG00000033431	TRUB1	99	79.943	Cercocebus_atys
ENSMUSG00000025086	Trub1	94	78.367	ENSCLAG00000008664	TRUB1	100	78.279	Chinchilla_lanigera
ENSMUSG00000025086	Trub1	99	78.797	ENSCSAG00000004891	TRUB1	99	79.943	Chlorocebus_sabaeus
ENSMUSG00000025086	Trub1	100	66.286	ENSCHOG00000011931	TRUB1	86	72.185	Choloepus_hoffmanni
ENSMUSG00000025086	Trub1	80	74.539	ENSCPBG00000003051	TRUB1	92	74.157	Chrysemys_picta_bellii
ENSMUSG00000025086	Trub1	99	78.797	ENSCANG00000029445	TRUB1	99	79.943	Colobus_angolensis_palliatus
ENSMUSG00000025086	Trub1	75	87.059	ENSCGRG00001016772	-	85	86.770	Cricetulus_griseus_chok1gshd
ENSMUSG00000025086	Trub1	83	79.004	ENSCGRG00001010322	-	86	71.302	Cricetulus_griseus_chok1gshd
ENSMUSG00000025086	Trub1	100	81.361	ENSCGRG00000010806	Trub1	100	82.544	Cricetulus_griseus_crigri
ENSMUSG00000025086	Trub1	76	64.171	ENSCSEG00000011261	trub1	78	62.810	Cynoglossus_semilaevis
ENSMUSG00000025086	Trub1	76	66.310	ENSCVAG00000008791	trub1	76	65.992	Cyprinodon_variegatus
ENSMUSG00000025086	Trub1	78	64.394	ENSDARG00000053805	trub1	89	64.615	Danio_rerio
ENSMUSG00000025086	Trub1	96	75.449	ENSDNOG00000001069	TRUB1	81	80.702	Dasypus_novemcinctus
ENSMUSG00000025086	Trub1	96	83.436	ENSDORG00000010431	Trub1	94	83.436	Dipodomys_ordii
ENSMUSG00000025086	Trub1	67	86.620	ENSETEG00000009183	TRUB1	61	88.806	Echinops_telfairi
ENSMUSG00000025086	Trub1	88	84.950	ENSEASG00005014739	TRUB1	100	80.000	Equus_asinus_asinus
ENSMUSG00000025086	Trub1	88	84.950	ENSECAG00000007177	TRUB1	100	80.000	Equus_caballus
ENSMUSG00000025086	Trub1	87	73.469	ENSEEUG00000013993	TRUB1	79	72.982	Erinaceus_europaeus
ENSMUSG00000025086	Trub1	82	65.347	ENSELUG00000000502	trub1	84	68.880	Esox_lucius
ENSMUSG00000025086	Trub1	89	85.667	ENSFCAG00000031927	TRUB1	99	81.268	Felis_catus
ENSMUSG00000025086	Trub1	71	71.369	ENSFALG00000002232	TRUB1	93	71.369	Ficedula_albicollis
ENSMUSG00000025086	Trub1	80	89.340	ENSFDAG00000008140	TRUB1	81	89.340	Fukomys_damarensis
ENSMUSG00000025086	Trub1	76	65.241	ENSFHEG00000004016	trub1	83	65.289	Fundulus_heteroclitus
ENSMUSG00000025086	Trub1	80	70.480	ENSGALG00000009091	TRUB1	94	70.412	Gallus_gallus
ENSMUSG00000025086	Trub1	76	64.362	ENSGAFG00000009193	trub1	85	64.315	Gambusia_affinis
ENSMUSG00000025086	Trub1	59	65.327	ENSGACG00000015387	trub1	98	65.327	Gasterosteus_aculeatus
ENSMUSG00000025086	Trub1	86	71.034	ENSGAGG00000009758	TRUB1	76	74.906	Gopherus_agassizii
ENSMUSG00000025086	Trub1	99	79.656	ENSGGOG00000004583	TRUB1	99	79.656	Gorilla_gorilla
ENSMUSG00000025086	Trub1	82	62.069	ENSHBUG00000016787	trub1	89	65.726	Haplochromis_burtoni
ENSMUSG00000025086	Trub1	100	74.148	ENSHGLG00000015314	TRUB1	100	75.358	Heterocephalus_glaber_female
ENSMUSG00000025086	Trub1	94	80.169	ENSHGLG00100009183	TRUB1	100	80.169	Heterocephalus_glaber_male
ENSMUSG00000025086	Trub1	76	64.706	ENSHCOG00000017877	trub1	87	65.560	Hippocampus_comes
ENSMUSG00000025086	Trub1	79	64.552	ENSIPUG00000017559	trub1	93	64.528	Ictalurus_punctatus
ENSMUSG00000025086	Trub1	89	84.106	ENSSTOG00000003641	TRUB1	100	79.706	Ictidomys_tridecemlineatus
ENSMUSG00000025086	Trub1	100	77.059	ENSJJAG00000011800	Trub1	100	74.854	Jaculus_jaculus
ENSMUSG00000025086	Trub1	76	64.171	ENSKMAG00000006232	trub1	91	63.636	Kryptolebias_marmoratus
ENSMUSG00000025086	Trub1	76	66.310	ENSLBEG00000026722	trub1	85	65.702	Labrus_bergylta
ENSMUSG00000025086	Trub1	82	70.290	ENSLACG00000014885	TRUB1	88	71.863	Latimeria_chalumnae
ENSMUSG00000025086	Trub1	78	69.811	ENSLOCG00000012979	trub1	87	70.039	Lepisosteus_oculatus
ENSMUSG00000025086	Trub1	96	77.273	ENSLAFG00000015452	TRUB1	99	73.639	Loxodonta_africana
ENSMUSG00000025086	Trub1	99	79.083	ENSMFAG00000031767	TRUB1	99	80.229	Macaca_fascicularis
ENSMUSG00000025086	Trub1	99	78.797	ENSMMUG00000001902	TRUB1	99	79.943	Macaca_mulatta
ENSMUSG00000025086	Trub1	99	74.499	ENSMNEG00000044646	TRUB1	99	75.645	Macaca_nemestrina
ENSMUSG00000025086	Trub1	99	79.083	ENSMLEG00000042655	TRUB1	99	79.943	Mandrillus_leucophaeus
ENSMUSG00000025086	Trub1	79	63.590	ENSMZEG00005024095	trub1	89	65.726	Maylandia_zebra
ENSMUSG00000025086	Trub1	80	70.741	ENSMGAG00000011135	TRUB1	91	70.677	Meleagris_gallopavo
ENSMUSG00000025086	Trub1	100	81.361	ENSMAUG00000011101	Trub1	100	81.361	Mesocricetus_auratus
ENSMUSG00000025086	Trub1	100	79.370	ENSMICG00000016324	TRUB1	100	80.802	Microcebus_murinus
ENSMUSG00000025086	Trub1	100	81.953	ENSMOCG00000017759	Trub1	100	82.249	Microtus_ochrogaster
ENSMUSG00000025086	Trub1	79	82.090	ENSMODG00000009676	TRUB1	73	81.955	Monodelphis_domestica
ENSMUSG00000025086	Trub1	100	98.817	MGP_CAROLIEiJ_G0023100	Trub1	100	98.817	Mus_caroli
ENSMUSG00000025086	Trub1	100	96.450	MGP_PahariEiJ_G0014588	Trub1	100	96.450	Mus_pahari
ENSMUSG00000025086	Trub1	100	99.112	MGP_SPRETEiJ_G0024021	Trub1	100	99.112	Mus_spretus
ENSMUSG00000025086	Trub1	89	86.379	ENSMPUG00000003556	TRUB1	99	80.516	Mustela_putorius_furo
ENSMUSG00000025086	Trub1	95	80.938	ENSMLUG00000017686	TRUB1	99	78.070	Myotis_lucifugus
ENSMUSG00000025086	Trub1	100	79.598	ENSNGAG00000018682	Trub1	100	79.310	Nannospalax_galili
ENSMUSG00000025086	Trub1	76	64.706	ENSNBRG00000023393	trub1	86	66.529	Neolamprologus_brichardi
ENSMUSG00000025086	Trub1	88	85.235	ENSNLEG00000016345	TRUB1	99	79.370	Nomascus_leucogenys
ENSMUSG00000025086	Trub1	75	84.946	ENSMEUG00000006603	TRUB1	74	87.437	Notamacropus_eugenii
ENSMUSG00000025086	Trub1	89	79.470	ENSOPRG00000009371	TRUB1	100	75.000	Ochotona_princeps
ENSMUSG00000025086	Trub1	100	72.857	ENSODEG00000010854	TRUB1	82	82.105	Octodon_degus
ENSMUSG00000025086	Trub1	82	61.084	ENSONIG00000007249	trub1	90	65.323	Oreochromis_niloticus
ENSMUSG00000025086	Trub1	81	76.923	ENSOANG00000001556	TRUB1	88	77.154	Ornithorhynchus_anatinus
ENSMUSG00000025086	Trub1	89	81.126	ENSOCUG00000009456	TRUB1	100	75.434	Oryctolagus_cuniculus
ENSMUSG00000025086	Trub1	75	67.204	ENSORLG00000029719	trub1	85	67.647	Oryzias_latipes
ENSMUSG00000025086	Trub1	75	66.667	ENSORLG00020016767	trub1	84	67.227	Oryzias_latipes_hni
ENSMUSG00000025086	Trub1	75	66.667	ENSORLG00015014728	trub1	85	68.067	Oryzias_latipes_hsok
ENSMUSG00000025086	Trub1	82	64.532	ENSOMEG00000014556	trub1	84	66.946	Oryzias_melastigma
ENSMUSG00000025086	Trub1	89	86.093	ENSOGAG00000015895	TRUB1	100	80.286	Otolemur_garnettii
ENSMUSG00000025086	Trub1	87	83.444	ENSOARG00000015591	TRUB1	100	78.125	Ovis_aries
ENSMUSG00000025086	Trub1	99	79.943	ENSPPAG00000043645	TRUB1	99	79.943	Pan_paniscus
ENSMUSG00000025086	Trub1	89	85.333	ENSPPRG00000007096	TRUB1	99	80.980	Panthera_pardus
ENSMUSG00000025086	Trub1	89	85.667	ENSPTIG00000006378	TRUB1	99	81.268	Panthera_tigris_altaica
ENSMUSG00000025086	Trub1	99	79.943	ENSPTRG00000002964	TRUB1	99	79.943	Pan_troglodytes
ENSMUSG00000025086	Trub1	99	78.510	ENSPANG00000020712	TRUB1	99	79.656	Papio_anubis
ENSMUSG00000025086	Trub1	51	67.630	ENSPKIG00000003852	trub1	74	67.630	Paramormyrops_kingsleyae
ENSMUSG00000025086	Trub1	86	69.896	ENSPSIG00000012877	TRUB1	92	72.285	Pelodiscus_sinensis
ENSMUSG00000025086	Trub1	76	63.102	ENSPMGG00000000075	trub1	87	64.730	Periophthalmus_magnuspinnatus
ENSMUSG00000025086	Trub1	100	81.176	ENSPEMG00000011156	Trub1	100	82.059	Peromyscus_maniculatus_bairdii
ENSMUSG00000025086	Trub1	85	78.322	ENSPCIG00000009729	TRUB1	77	78.169	Phascolarctos_cinereus
ENSMUSG00000025086	Trub1	76	66.310	ENSPFOG00000009950	trub1	89	65.323	Poecilia_formosa
ENSMUSG00000025086	Trub1	76	66.310	ENSPLAG00000013855	trub1	86	65.323	Poecilia_latipinna
ENSMUSG00000025086	Trub1	76	66.310	ENSPMEG00000009064	trub1	88	65.323	Poecilia_mexicana
ENSMUSG00000025086	Trub1	76	66.310	ENSPREG00000003343	trub1	88	65.726	Poecilia_reticulata
ENSMUSG00000025086	Trub1	96	80.357	ENSPPYG00000002676	TRUB1	99	79.656	Pongo_abelii
ENSMUSG00000025086	Trub1	79	85.204	ENSPCAG00000008427	TRUB1	80	74.296	Procavia_capensis
ENSMUSG00000025086	Trub1	89	79.801	ENSPCOG00000024360	TRUB1	100	75.358	Propithecus_coquereli
ENSMUSG00000025086	Trub1	80	89.340	ENSPVAG00000007575	TRUB1	100	83.650	Pteropus_vampyrus
ENSMUSG00000025086	Trub1	80	63.131	ENSPNYG00000018614	trub1	89	65.726	Pundamilia_nyererei
ENSMUSG00000025086	Trub1	72	59.836	ENSPNAG00000006881	trub1	77	59.751	Pygocentrus_nattereri
ENSMUSG00000025086	Trub1	100	90.909	ENSRNOG00000017321	Trub1	100	90.029	Rattus_norvegicus
ENSMUSG00000025086	Trub1	99	69.914	ENSRBIG00000033423	TRUB1	99	70.487	Rhinopithecus_bieti
ENSMUSG00000025086	Trub1	99	79.370	ENSRROG00000033902	TRUB1	99	79.943	Rhinopithecus_roxellana
ENSMUSG00000025086	Trub1	96	80.952	ENSSBOG00000024237	TRUB1	99	79.429	Saimiri_boliviensis_boliviensis
ENSMUSG00000025086	Trub1	75	76.172	ENSSHAG00000009346	TRUB1	86	76.172	Sarcophilus_harrisii
ENSMUSG00000025086	Trub1	79	63.402	ENSSFOG00015022124	trub1	82	67.782	Scleropages_formosus
ENSMUSG00000025086	Trub1	86	61.033	ENSSMAG00000001020	trub1	86	66.529	Scophthalmus_maximus
ENSMUSG00000025086	Trub1	73	66.851	ENSSDUG00000016414	trub1	87	66.942	Seriola_dumerili
ENSMUSG00000025086	Trub1	73	67.403	ENSSLDG00000015486	trub1	87	67.355	Seriola_lalandi_dorsalis
ENSMUSG00000025086	Trub1	80	75.646	ENSSPUG00000001642	TRUB1	92	75.655	Sphenodon_punctatus
ENSMUSG00000025086	Trub1	76	66.845	ENSSPAG00000001217	trub1	87	68.595	Stegastes_partitus
ENSMUSG00000025086	Trub1	100	76.857	ENSSSCG00000010653	TRUB1	100	76.857	Sus_scrofa
ENSMUSG00000025086	Trub1	80	71.747	ENSTGUG00000010971	TRUB1	95	71.536	Taeniopygia_guttata
ENSMUSG00000025086	Trub1	75	71.542	ENSTBEG00000002880	TRUB1	99	71.542	Tupaia_belangeri
ENSMUSG00000025086	Trub1	81	88.060	ENSTTRG00000005767	TRUB1	100	80.916	Tursiops_truncatus
ENSMUSG00000025086	Trub1	89	86.379	ENSUAMG00000024876	TRUB1	99	81.662	Ursus_americanus
ENSMUSG00000025086	Trub1	87	87.713	ENSUMAG00000002411	TRUB1	99	80.938	Ursus_maritimus
ENSMUSG00000025086	Trub1	100	77.429	ENSVPAG00000005507	TRUB1	100	78.571	Vicugna_pacos
ENSMUSG00000025086	Trub1	88	86.486	ENSVVUG00000010085	TRUB1	83	80.925	Vulpes_vulpes
ENSMUSG00000025086	Trub1	80	65.185	ENSXETG00000023828	trub1	96	65.414	Xenopus_tropicalis
ENSMUSG00000025086	Trub1	76	65.775	ENSXCOG00000017847	trub1	85	65.000	Xiphophorus_couchianus
ENSMUSG00000025086	Trub1	76	65.775	ENSXMAG00000014701	trub1	88	64.516	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001522	pseudouridine synthesis	-	IEA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006396	RNA processing	-	IEA	Process
GO:0006400	tRNA modification	21873635.	IBA	Process
GO:0009451	RNA modification	-	IEA	Process
GO:0009982	pseudouridine synthase activity	21873635.	IBA	Function
GO:0009982	pseudouridine synthase activity	-	ISO	Function
GO:0016853	isomerase activity	-	IEA	Function
GO:1990481	mRNA pseudouridine synthesis	21873635.	IBA	Process
GO:1990481	mRNA pseudouridine synthesis	-	ISO	Process