EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000025130 (Gene tree)
Gene ID: 18453
Gene Symbol: P4hb
Alias: ERp59|PDI|Pdia1|Thbp|protein disulfide isomerase
Full Name: prolyl 4-hydroxylase%2C beta polypeptide
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 12956
Position: chr11: 120560298-120573253
Accession: 97464
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000166620	-	414	-	-	- (aa)	-	-
ENSMUST00000026122	-	2861	-	ENSMUSP00000026122	509 (aa)	-	P09103
ENSMUST00000168360	-	770	-	ENSMUSP00000128796	165 (aa)	-	E9Q8G8

Gene Model

Click here to download ENSMUSG00000025130's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000025130's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000025130	P4hb	90	94.989	ENSG00000185624	P4HB	97	94.534	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003756	protein disulfide isomerase activity	21873635.	IBA	Function
GO:0003756	protein disulfide isomerase activity	-	ISO	Function
GO:0004656	procollagen-proline 4-dioxygenase activity	-	ISO	Function
GO:0005178	integrin binding	21670307.	IPI	Function
GO:0005178	integrin binding	-	ISO	Function
GO:0005515	protein binding	21670307.	IPI	Function
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0005783	endoplasmic reticulum	9493907.9806833.14622145.15767459.15767678.18094359.	IDA	Component
GO:0005783	endoplasmic reticulum	19966784.23152784.	ISO	Component
GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	-	ISO	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0006457	protein folding	21873635.	IBA	Process
GO:0009897	external side of plasma membrane	21873635.	IBA	Component
GO:0009897	external side of plasma membrane	21670307.	IDA	Component
GO:0009897	external side of plasma membrane	-	ISO	Component
GO:0015037	peptide disulfide oxidoreductase activity	-	ISO	Function
GO:0016020	membrane	-	IEA	Component
GO:0016222	procollagen-proline 4-dioxygenase complex	-	ISO	Component
GO:0016853	isomerase activity	-	IEA	Function
GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	7753822.	ISO	Process
GO:0019899	enzyme binding	-	ISO	Function
GO:0034663	endoplasmic reticulum chaperone complex	12475965.	IDA	Component
GO:0034976	response to endoplasmic reticulum stress	21873635.	IBA	Process
GO:0034976	response to endoplasmic reticulum stress	-	ISO	Process
GO:0045454	cell redox homeostasis	-	IEA	Process
GO:0046598	positive regulation of viral entry into host cell	-	ISO	Process
GO:0046982	protein heterodimerization activity	-	ISO	Function
GO:0071456	cellular response to hypoxia	-	ISO	Process
GO:0098761	cellular response to interleukin-7	29581031.	IDA	Process
GO:1902175	regulation of oxidative stress-induced intrinsic apoptotic signaling pathway	-	ISO	Process