EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000025255 (Gene tree)
Gene ID: 80892
Gene Symbol: Zfhx4
Alias: C130041O22Rik|Zfh-4|Zfh4
Full Name: zinc finger homeodomain 4
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 197332 bases
Position: chr3:5218526-5415857
Accession: 2137668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000026284	zf-C2H2	PF00096.26	1.1e-14	1	2
ENSMUSP00000026284	zf-C2H2	PF00096.26	1.1e-14	2	2
ENSMUSP00000135289	zf-C2H2	PF00096.26	1.1e-14	1	2
ENSMUSP00000135289	zf-C2H2	PF00096.26	1.1e-14	2	2
ENSMUSP00000135827	zf-C2H2	PF00096.26	1.3e-14	1	2
ENSMUSP00000135827	zf-C2H2	PF00096.26	1.3e-14	2	2
ENSMUSP00000026284	zf-met	PF12874.7	0.00021	1	1
ENSMUSP00000135289	zf-met	PF12874.7	0.00021	1	1
ENSMUSP00000135827	zf-met	PF12874.7	0.00024	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000176175	-	524	-	ENSMUSP00000139253	101 (aa)	-	V9GXP5
ENSMUST00000026284	-	13874	-	ENSMUSP00000026284	3581 (aa)	-	E9Q5A7
ENSMUST00000175641	-	2194	-	-	- (aa)	-	-
ENSMUST00000175866	-	11287	XM_006530104	ENSMUSP00000135827	3606 (aa)	XP_006530167	H3BLK8
ENSMUST00000176383	-	13500	XM_006530106	ENSMUSP00000135289	3581 (aa)	XP_006530169	E9Q5A7

Gene Model

Click here to download ENSMUSG00000025255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000025255's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000025255	Zfhx4	100	91.351	ENSG00000091656	ZFHX4	100	94.839	Homo_sapiens
ENSMUSG00000025255	Zfhx4	100	88.864	ENSAMEG00000016203	ZFHX4	100	88.947	Ailuropoda_melanoleuca
ENSMUSG00000025255	Zfhx4	100	58.745	ENSACIG00000002805	zfhx4	100	59.546	Amphilophus_citrinellus
ENSMUSG00000025255	Zfhx4	52	62.631	ENSAOCG00000010470	zfhx4	75	66.136	Amphiprion_ocellaris
ENSMUSG00000025255	Zfhx4	100	58.151	ENSAPEG00000024228	zfhx4	76	65.876	Amphiprion_percula
ENSMUSG00000025255	Zfhx4	71	74.439	ENSATEG00000015997	zfhx4	97	65.854	Anabas_testudineus
ENSMUSG00000025255	Zfhx4	100	84.455	ENSAPLG00000012910	ZFHX4	100	84.149	Anas_platyrhynchos
ENSMUSG00000025255	Zfhx4	100	90.982	ENSANAG00000034150	ZFHX4	100	91.038	Aotus_nancymaae
ENSMUSG00000025255	Zfhx4	100	68.810	ENSAMXG00000013609	zfhx4	100	69.461	Astyanax_mexicanus
ENSMUSG00000025255	Zfhx4	100	88.522	ENSBTAG00000033268	ZFHX4	100	88.745	Bos_taurus
ENSMUSG00000025255	Zfhx4	100	91.158	ENSCJAG00000000517	ZFHX4	100	91.213	Callithrix_jacchus
ENSMUSG00000025255	Zfhx4	55	89.016	ENSCAFG00000008310	ZFHX4	100	89.342	Canis_familiaris
ENSMUSG00000025255	Zfhx4	100	88.415	ENSCHIG00000017123	ZFHX4	100	89.589	Capra_hircus
ENSMUSG00000025255	Zfhx4	100	89.392	ENSTSYG00000010369	ZFHX4	100	89.878	Carlito_syrichta
ENSMUSG00000025255	Zfhx4	86	89.725	ENSCPOG00000012693	ZFHX4	100	89.437	Cavia_porcellus
ENSMUSG00000025255	Zfhx4	100	91.158	ENSCCAG00000026493	ZFHX4	100	91.213	Cebus_capucinus
ENSMUSG00000025255	Zfhx4	100	91.349	ENSCATG00000033950	ZFHX4	100	91.404	Cercocebus_atys
ENSMUSG00000025255	Zfhx4	99	89.832	ENSCLAG00000011659	ZFHX4	100	88.745	Chinchilla_lanigera
ENSMUSG00000025255	Zfhx4	100	91.154	ENSCSAG00000013465	ZFHX4	100	91.210	Chlorocebus_sabaeus
ENSMUSG00000025255	Zfhx4	100	91.158	ENSCANG00000034083	ZFHX4	100	91.213	Colobus_angolensis_palliatus
ENSMUSG00000025255	Zfhx4	100	93.722	ENSCGRG00001011235	Zfhx4	100	93.805	Cricetulus_griseus_chok1gshd
ENSMUSG00000025255	Zfhx4	98	60.111	ENSCSEG00000008391	zfhx4	100	61.903	Cynoglossus_semilaevis
ENSMUSG00000025255	Zfhx4	98	60.580	ENSCVAG00000003822	zfhx4	95	65.631	Cyprinodon_variegatus
ENSMUSG00000025255	Zfhx4	93	89.833	ENSDNOG00000038560	ZFHX4	100	89.681	Dasypus_novemcinctus
ENSMUSG00000025255	Zfhx4	100	90.403	ENSDORG00000016167	Zfhx4	100	90.292	Dipodomys_ordii
ENSMUSG00000025255	Zfhx4	85	95.000	ENSETEG00000004672	ZFHX4	85	95.000	Echinops_telfairi
ENSMUSG00000025255	Zfhx4	100	89.238	ENSEASG00005020537	ZFHX4	100	89.321	Equus_asinus_asinus
ENSMUSG00000025255	Zfhx4	100	90.014	ENSECAG00000022611	ZFHX4	100	90.290	Equus_caballus
ENSMUSG00000025255	Zfhx4	93	91.004	ENSEEUG00000007585	ZFHX4	88	91.004	Erinaceus_europaeus
ENSMUSG00000025255	Zfhx4	96	65.072	ENSELUG00000009500	zfhx4	100	63.750	Esox_lucius
ENSMUSG00000025255	Zfhx4	100	90.379	ENSFCAG00000015688	ZFHX4	100	91.126	Felis_catus
ENSMUSG00000025255	Zfhx4	55	84.705	ENSFALG00000008584	ZFHX4	54	84.146	Ficedula_albicollis
ENSMUSG00000025255	Zfhx4	100	90.859	ENSFDAG00000018199	ZFHX4	100	91.163	Fukomys_damarensis
ENSMUSG00000025255	Zfhx4	98	60.117	ENSFHEG00000003914	zfhx4	97	61.448	Fundulus_heteroclitus
ENSMUSG00000025255	Zfhx4	55	84.804	ENSGALG00000037164	ZFHX4	100	85.110	Gallus_gallus
ENSMUSG00000025255	Zfhx4	100	59.876	ENSGAFG00000009778	zfhx4	100	60.022	Gambusia_affinis
ENSMUSG00000025255	Zfhx4	100	60.268	ENSGACG00000002418	zfhx4	100	61.072	Gasterosteus_aculeatus
ENSMUSG00000025255	Zfhx4	92	89.045	ENSGAGG00000017044	ZFHX4	96	89.073	Gopherus_agassizii
ENSMUSG00000025255	Zfhx4	100	91.324	ENSGGOG00000024837	ZFHX4	100	91.379	Gorilla_gorilla
ENSMUSG00000025255	Zfhx4	100	90.932	ENSHGLG00000007968	ZFHX4	100	91.236	Heterocephalus_glaber_female
ENSMUSG00000025255	Zfhx4	100	89.757	ENSHGLG00100003129	ZFHX4	100	90.547	Heterocephalus_glaber_male
ENSMUSG00000025255	Zfhx4	98	57.936	ENSHCOG00000012979	zfhx4	75	65.522	Hippocampus_comes
ENSMUSG00000025255	Zfhx4	98	68.802	ENSIPUG00000014739	zfhx4	99	70.184	Ictalurus_punctatus
ENSMUSG00000025255	Zfhx4	100	90.608	ENSJJAG00000022978	Zfhx4	100	90.580	Jaculus_jaculus
ENSMUSG00000025255	Zfhx4	54	59.373	ENSKMAG00000016330	zfhx4	95	66.150	Kryptolebias_marmoratus
ENSMUSG00000025255	Zfhx4	55	58.967	ENSLBEG00000021697	zfhx4	55	59.395	Labrus_bergylta
ENSMUSG00000025255	Zfhx4	98	72.258	ENSLOCG00000013472	zfhx4	100	72.712	Lepisosteus_oculatus
ENSMUSG00000025255	Zfhx4	100	89.967	ENSLAFG00000014395	ZFHX4	100	90.050	Loxodonta_africana
ENSMUSG00000025255	Zfhx4	100	91.351	ENSMFAG00000034757	ZFHX4	100	91.406	Macaca_fascicularis
ENSMUSG00000025255	Zfhx4	100	91.351	ENSMMUG00000019414	ZFHX4	100	91.406	Macaca_mulatta
ENSMUSG00000025255	Zfhx4	100	91.379	ENSMNEG00000041913	ZFHX4	100	91.434	Macaca_nemestrina
ENSMUSG00000025255	Zfhx4	100	91.351	ENSMLEG00000038977	ZFHX4	100	91.406	Mandrillus_leucophaeus
ENSMUSG00000025255	Zfhx4	73	65.168	ENSMAMG00000022166	zfhx4	76	65.808	Mastacembelus_armatus
ENSMUSG00000025255	Zfhx4	100	90.693	ENSMICG00000008252	ZFHX4	100	90.748	Microcebus_murinus
ENSMUSG00000025255	Zfhx4	100	93.592	ENSMOCG00000021103	Zfhx4	100	93.647	Microtus_ochrogaster
ENSMUSG00000025255	Zfhx4	80	62.597	ENSMMOG00000004800	zfhx4	76	64.048	Mola_mola
ENSMUSG00000025255	Zfhx4	55	85.540	ENSMODG00000006777	ZFHX4	100	86.824	Monodelphis_domestica
ENSMUSG00000025255	Zfhx4	60	84.559	ENSMALG00000006928	zfhx4	91	77.444	Monopterus_albus
ENSMUSG00000025255	Zfhx4	100	99.002	MGP_CAROLIEiJ_G0024825	Zfhx4	100	99.002	Mus_caroli
ENSMUSG00000025255	Zfhx4	100	97.479	MGP_PahariEiJ_G0026273	Zfhx4	100	97.479	Mus_pahari
ENSMUSG00000025255	Zfhx4	100	99.612	MGP_SPRETEiJ_G0025754	Zfhx4	100	99.612	Mus_spretus
ENSMUSG00000025255	Zfhx4	100	89.560	ENSMPUG00000010092	ZFHX4	100	89.560	Mustela_putorius_furo
ENSMUSG00000025255	Zfhx4	86	84.007	ENSMLUG00000016989	ZFHX4	88	84.375	Myotis_lucifugus
ENSMUSG00000025255	Zfhx4	92	91.521	ENSNLEG00000001972	ZFHX4	99	91.715	Nomascus_leucogenys
ENSMUSG00000025255	Zfhx4	56	89.552	ENSOPRG00000004454	-	55	89.552	Ochotona_princeps
ENSMUSG00000025255	Zfhx4	100	88.942	ENSODEG00000001283	ZFHX4	100	88.972	Octodon_degus
ENSMUSG00000025255	Zfhx4	100	60.794	ENSONIG00000014495	zfhx4	98	65.435	Oreochromis_niloticus
ENSMUSG00000025255	Zfhx4	100	90.397	ENSOCUG00000001723	ZFHX4	100	90.370	Oryctolagus_cuniculus
ENSMUSG00000025255	Zfhx4	98	61.674	ENSORLG00000006928	zfhx4	97	66.625	Oryzias_latipes
ENSMUSG00000025255	Zfhx4	50	64.353	ENSORLG00020003276	zfhx4	73	66.708	Oryzias_latipes_hni
ENSMUSG00000025255	Zfhx4	98	61.575	ENSORLG00015020411	zfhx4	53	57.791	Oryzias_latipes_hsok
ENSMUSG00000025255	Zfhx4	100	90.713	ENSOGAG00000000486	ZFHX4	100	90.685	Otolemur_garnettii
ENSMUSG00000025255	Zfhx4	100	87.292	ENSOARG00000007353	ZFHX4	100	87.458	Ovis_aries
ENSMUSG00000025255	Zfhx4	83	91.195	ENSPPAG00000029240	ZFHX4	100	91.262	Pan_paniscus
ENSMUSG00000025255	Zfhx4	92	91.930	ENSPPRG00000014119	ZFHX4	92	91.887	Panthera_pardus
ENSMUSG00000025255	Zfhx4	100	88.195	ENSPTIG00000007657	ZFHX4	100	88.245	Panthera_tigris_altaica
ENSMUSG00000025255	Zfhx4	100	91.487	ENSPTRG00000020358	ZFHX4	100	91.542	Pan_troglodytes
ENSMUSG00000025255	Zfhx4	100	91.351	ENSPANG00000023610	ZFHX4	100	91.406	Papio_anubis
ENSMUSG00000025255	Zfhx4	100	69.332	ENSPKIG00000006160	zfhx4	100	69.854	Paramormyrops_kingsleyae
ENSMUSG00000025255	Zfhx4	55	84.488	ENSPSIG00000003765	ZFHX4	64	83.886	Pelodiscus_sinensis
ENSMUSG00000025255	Zfhx4	59	78.659	ENSPMGG00000007123	zfhx4	90	76.733	Periophthalmus_magnuspinnatus
ENSMUSG00000025255	Zfhx4	98	60.716	ENSPFOG00000009152	zfhx4	99	60.966	Poecilia_formosa
ENSMUSG00000025255	Zfhx4	97	62.401	ENSPLAG00000015099	zfhx4	99	63.049	Poecilia_latipinna
ENSMUSG00000025255	Zfhx4	72	64.512	ENSPMEG00000022456	zfhx4	95	65.901	Poecilia_mexicana
ENSMUSG00000025255	Zfhx4	95	65.723	ENSPREG00000016234	zfhx4	95	66.000	Poecilia_reticulata
ENSMUSG00000025255	Zfhx4	100	90.821	ENSPCOG00000021426	ZFHX4	100	90.793	Propithecus_coquereli
ENSMUSG00000025255	Zfhx4	99	84.705	ENSPVAG00000004200	ZFHX4	99	84.898	Pteropus_vampyrus
ENSMUSG00000025255	Zfhx4	100	68.973	ENSPNAG00000022085	zfhx4	100	69.605	Pygocentrus_nattereri
ENSMUSG00000025255	Zfhx4	100	94.772	ENSRNOG00000008765	Zfhx4	100	94.828	Rattus_norvegicus
ENSMUSG00000025255	Zfhx4	100	91.160	ENSRBIG00000028413	ZFHX4	100	91.160	Rhinopithecus_bieti
ENSMUSG00000025255	Zfhx4	100	90.304	ENSRROG00000031310	ZFHX4	100	90.470	Rhinopithecus_roxellana
ENSMUSG00000025255	Zfhx4	100	90.578	ENSSBOG00000026983	ZFHX4	100	90.605	Saimiri_boliviensis_boliviensis
ENSMUSG00000025255	Zfhx4	55	84.736	ENSSHAG00000013776	ZFHX4	100	86.860	Sarcophilus_harrisii
ENSMUSG00000025255	Zfhx4	100	70.441	ENSSFOG00015011589	zfhx4	100	69.645	Scleropages_formosus
ENSMUSG00000025255	Zfhx4	98	61.549	ENSSMAG00000019081	zfhx4	95	65.502	Scophthalmus_maximus
ENSMUSG00000025255	Zfhx4	85	65.087	ENSSDUG00000004192	zfhx4	99	63.460	Seriola_dumerili
ENSMUSG00000025255	Zfhx4	86	65.071	ENSSLDG00000010919	zfhx4	100	63.460	Seriola_lalandi_dorsalis
ENSMUSG00000025255	Zfhx4	89	90.671	ENSSARG00000001090	ZFHX4	88	90.525	Sorex_araneus
ENSMUSG00000025255	Zfhx4	98	61.838	ENSSPAG00000003479	zfhx4	53	59.671	Stegastes_partitus
ENSMUSG00000025255	Zfhx4	100	90.130	ENSSSCG00000006169	ZFHX4	100	90.102	Sus_scrofa
ENSMUSG00000025255	Zfhx4	97	86.878	ENSTGUG00000011605	ZFHX4	97	86.837	Taeniopygia_guttata
ENSMUSG00000025255	Zfhx4	53	58.969	ENSTRUG00000000173	zfhx4	53	59.373	Takifugu_rubripes
ENSMUSG00000025255	Zfhx4	78	68.034	ENSTNIG00000008122	zfhx4	96	68.034	Tetraodon_nigroviridis
ENSMUSG00000025255	Zfhx4	93	90.351	ENSTBEG00000012567	ZFHX4	94	90.351	Tupaia_belangeri
ENSMUSG00000025255	Zfhx4	97	88.813	ENSTTRG00000002634	ZFHX4	97	88.813	Tursiops_truncatus
ENSMUSG00000025255	Zfhx4	100	88.830	ENSUAMG00000006601	ZFHX4	100	89.374	Ursus_americanus
ENSMUSG00000025255	Zfhx4	98	91.347	ENSUMAG00000014815	ZFHX4	100	88.011	Ursus_maritimus
ENSMUSG00000025255	Zfhx4	100	87.194	ENSVVUG00000019627	ZFHX4	100	87.556	Vulpes_vulpes
ENSMUSG00000025255	Zfhx4	100	76.040	ENSXETG00000017151	zfhx4	100	75.599	Xenopus_tropicalis
ENSMUSG00000025255	Zfhx4	98	65.066	ENSXCOG00000006449	zfhx4	98	65.803	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	21873635.	IBA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	24440720.	IDA	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0043565	sequence-specific DNA binding	-	IEA	Function
GO:0044212	transcription regulatory region DNA binding	21873635.	IBA	Function
GO:0045893	positive regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function