EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000025264 (Gene tree)
Gene ID: 69499
Gene Symbol: Tsr2
Alias: 2310007F12Rik
Full Name: TSR2 20S rRNA accumulation
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 9450 bases
Position: chrX:151087094-151096543
Accession: 1916749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000108303	WGG	PF10273.9	3.1e-25	1	1
ENSMUSP00000026295	WGG	PF10273.9	4.3e-25	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000166689	-	909	-	-	- (aa)	-	-
ENSMUST00000112683	-	3796	-	ENSMUSP00000108303	192 (aa)	-	Z4YL87
ENSMUST00000026295	-	3804	-	ENSMUSP00000026295	195 (aa)	-	H7BWY8
ENSMUST00000166010	-	1318	-	ENSMUSP00000131835	35 (aa)	-	G3UWF3

Gene Model

Click here to download ENSMUSG00000025264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000025264's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000025264	Tsr2	99	85.864	ENSG00000158526	TSR2	100	85.864	Homo_sapiens
ENSMUSG00000025264	Tsr2	94	45.455	ENSAPOG00000004150	-	94	45.455	Acanthochromis_polyacanthus
ENSMUSG00000025264	Tsr2	99	81.675	ENSAMEG00000002469	TSR2	100	81.675	Ailuropoda_melanoleuca
ENSMUSG00000025264	Tsr2	70	50.000	ENSACIG00000004880	tsr2	94	50.000	Amphilophus_citrinellus
ENSMUSG00000025264	Tsr2	100	45.960	ENSAOCG00000015893	tsr2	97	45.960	Amphiprion_ocellaris
ENSMUSG00000025264	Tsr2	100	44.444	ENSAPEG00000023549	tsr2	97	45.455	Amphiprion_percula
ENSMUSG00000025264	Tsr2	100	44.792	ENSATEG00000019009	-	100	45.455	Anabas_testudineus
ENSMUSG00000025264	Tsr2	99	50.777	ENSACAG00000012270	TSR2	100	51.546	Anolis_carolinensis
ENSMUSG00000025264	Tsr2	99	85.340	ENSANAG00000000062	TSR2	100	85.340	Aotus_nancymaae
ENSMUSG00000025264	Tsr2	100	42.424	ENSACLG00000014269	tsr2	100	42.424	Astatotilapia_calliptera
ENSMUSG00000025264	Tsr2	99	47.959	ENSAMXG00000016817	tsr2	89	48.469	Astyanax_mexicanus
ENSMUSG00000025264	Tsr2	93	64.835	ENSBTAG00000018311	-	99	64.835	Bos_taurus
ENSMUSG00000025264	Tsr2	100	83.333	ENSBTAG00000015858	TSR2	100	83.333	Bos_taurus
ENSMUSG00000025264	Tsr2	99	85.864	ENSCJAG00000000251	TSR2	100	85.864	Callithrix_jacchus
ENSMUSG00000025264	Tsr2	99	82.723	ENSCAFG00000016440	TSR2	100	82.723	Canis_familiaris
ENSMUSG00000025264	Tsr2	99	82.723	ENSCAFG00020014044	TSR2	100	82.723	Canis_lupus_dingo
ENSMUSG00000025264	Tsr2	94	64.286	ENSCHIG00000009963	-	94	64.286	Capra_hircus
ENSMUSG00000025264	Tsr2	94	71.271	ENSTSYG00000031644	-	99	71.271	Carlito_syrichta
ENSMUSG00000025264	Tsr2	99	71.204	ENSTSYG00000031321	-	100	71.204	Carlito_syrichta
ENSMUSG00000025264	Tsr2	99	79.581	ENSTSYG00000005670	-	100	79.581	Carlito_syrichta
ENSMUSG00000025264	Tsr2	100	79.167	ENSCPOG00000033139	TSR2	100	79.167	Cavia_porcellus
ENSMUSG00000025264	Tsr2	99	84.293	ENSCCAG00000025421	TSR2	100	84.293	Cebus_capucinus
ENSMUSG00000025264	Tsr2	100	80.729	ENSCATG00000045152	-	100	80.729	Cercocebus_atys
ENSMUSG00000025264	Tsr2	99	85.864	ENSCATG00000036868	-	100	85.864	Cercocebus_atys
ENSMUSG00000025264	Tsr2	100	80.208	ENSCLAG00000007235	TSR2	100	80.208	Chinchilla_lanigera
ENSMUSG00000025264	Tsr2	99	81.152	ENSCSAG00000000402	-	100	81.152	Chlorocebus_sabaeus
ENSMUSG00000025264	Tsr2	96	82.162	ENSCSAG00000012366	-	97	82.162	Chlorocebus_sabaeus
ENSMUSG00000025264	Tsr2	99	83.770	ENSCHOG00000001068	TSR2	100	83.770	Choloepus_hoffmanni
ENSMUSG00000025264	Tsr2	94	32.086	ENSCING00000002386	-	94	32.086	Ciona_intestinalis
ENSMUSG00000025264	Tsr2	94	32.632	ENSCSAVG00000009298	-	94	32.632	Ciona_savignyi
ENSMUSG00000025264	Tsr2	99	73.298	ENSCANG00000036773	-	97	73.298	Colobus_angolensis_palliatus
ENSMUSG00000025264	Tsr2	99	85.864	ENSCANG00000043156	-	100	85.864	Colobus_angolensis_palliatus
ENSMUSG00000025264	Tsr2	100	92.188	ENSCGRG00001023321	Tsr2	100	92.188	Cricetulus_griseus_chok1gshd
ENSMUSG00000025264	Tsr2	100	92.308	ENSCGRG00000010855	Tsr2	100	92.308	Cricetulus_griseus_crigri
ENSMUSG00000025264	Tsr2	98	41.451	ENSCSEG00000017003	tsr2	99	42.487	Cynoglossus_semilaevis
ENSMUSG00000025264	Tsr2	98	44.103	ENSCVAG00000001845	tsr2	99	45.128	Cyprinodon_variegatus
ENSMUSG00000025264	Tsr2	99	41.624	ENSDARG00000005772	tsr2	98	52.941	Danio_rerio
ENSMUSG00000025264	Tsr2	100	79.688	ENSDORG00000025574	Tsr2	100	79.688	Dipodomys_ordii
ENSMUSG00000025264	Tsr2	99	79.688	ENSETEG00000018510	TSR2	100	79.688	Echinops_telfairi
ENSMUSG00000025264	Tsr2	95	40.000	ENSEBUG00000012895	tsr2	88	48.120	Eptatretus_burgeri
ENSMUSG00000025264	Tsr2	100	80.729	ENSEASG00005013005	TSR2	100	80.729	Equus_asinus_asinus
ENSMUSG00000025264	Tsr2	100	80.208	ENSECAG00000029844	TSR2	86	80.208	Equus_caballus
ENSMUSG00000025264	Tsr2	98	42.188	ENSELUG00000007768	tsr2	97	43.590	Esox_lucius
ENSMUSG00000025264	Tsr2	99	82.723	ENSFCAG00000002226	TSR2	100	82.723	Felis_catus
ENSMUSG00000025264	Tsr2	100	78.125	ENSFDAG00000011554	TSR2	100	78.125	Fukomys_damarensis
ENSMUSG00000025264	Tsr2	94	41.989	ENSGACG00000000595	tsr2	95	42.541	Gasterosteus_aculeatus
ENSMUSG00000025264	Tsr2	64	56.557	ENSGAGG00000007629	TSR2	84	49.367	Gopherus_agassizii
ENSMUSG00000025264	Tsr2	99	85.864	ENSGGOG00000041368	TSR2	100	85.864	Gorilla_gorilla
ENSMUSG00000025264	Tsr2	100	42.424	ENSHBUG00000020989	tsr2	80	43.939	Haplochromis_burtoni
ENSMUSG00000025264	Tsr2	100	76.562	ENSHGLG00000002188	TSR2	100	76.562	Heterocephalus_glaber_female
ENSMUSG00000025264	Tsr2	100	76.562	ENSHGLG00100001234	TSR2	100	76.562	Heterocephalus_glaber_male
ENSMUSG00000025264	Tsr2	69	50.725	ENSHCOG00000017585	-	64	50.725	Hippocampus_comes
ENSMUSG00000025264	Tsr2	99	45.408	ENSIPUG00000012170	tsr2	100	45.408	Ictalurus_punctatus
ENSMUSG00000025264	Tsr2	100	85.938	ENSSTOG00000033612	TSR2	100	85.938	Ictidomys_tridecemlineatus
ENSMUSG00000025264	Tsr2	99	85.052	ENSJJAG00000004561	Tsr2	99	85.052	Jaculus_jaculus
ENSMUSG00000025264	Tsr2	95	46.524	ENSKMAG00000012611	-	96	47.312	Kryptolebias_marmoratus
ENSMUSG00000025264	Tsr2	65	51.969	ENSLBEG00000017316	tsr2	54	51.493	Labrus_bergylta
ENSMUSG00000025264	Tsr2	100	81.771	ENSLAFG00000018093	TSR2	100	81.771	Loxodonta_africana
ENSMUSG00000025264	Tsr2	99	85.864	ENSMFAG00000001364	TSR2	100	85.864	Macaca_fascicularis
ENSMUSG00000025264	Tsr2	99	81.152	ENSMMUG00000010044	-	100	81.152	Macaca_mulatta
ENSMUSG00000025264	Tsr2	99	85.864	ENSMMUG00000012612	TSR2	100	85.864	Macaca_mulatta
ENSMUSG00000025264	Tsr2	99	85.864	ENSMNEG00000041996	TSR2	100	85.864	Macaca_nemestrina
ENSMUSG00000025264	Tsr2	99	85.864	ENSMLEG00000032632	TSR2	100	85.864	Mandrillus_leucophaeus
ENSMUSG00000025264	Tsr2	100	44.162	ENSMAMG00000011540	tsr2	100	43.147	Mastacembelus_armatus
ENSMUSG00000025264	Tsr2	100	42.424	ENSMZEG00005026752	tsr2	100	42.424	Maylandia_zebra
ENSMUSG00000025264	Tsr2	100	94.359	ENSMAUG00000012389	Tsr2	100	94.359	Mesocricetus_auratus
ENSMUSG00000025264	Tsr2	100	80.729	ENSMICG00000010116	TSR2	100	80.729	Microcebus_murinus
ENSMUSG00000025264	Tsr2	100	85.417	ENSMOCG00000006662	Tsr2	100	85.417	Microtus_ochrogaster
ENSMUSG00000025264	Tsr2	94	37.297	ENSMMOG00000009751	-	94	37.297	Mola_mola
ENSMUSG00000025264	Tsr2	99	47.000	ENSMODG00000020894	-	100	47.000	Monodelphis_domestica
ENSMUSG00000025264	Tsr2	95	42.623	ENSMALG00000014552	tsr2	96	42.623	Monopterus_albus
ENSMUSG00000025264	Tsr2	100	98.974	MGP_CAROLIEiJ_G0033491	Tsr2	100	98.974	Mus_caroli
ENSMUSG00000025264	Tsr2	100	97.949	MGP_PahariEiJ_G0032030	Tsr2	100	97.949	Mus_pahari
ENSMUSG00000025264	Tsr2	100	100.000	MGP_SPRETEiJ_G0034661	Tsr2	100	100.000	Mus_spretus
ENSMUSG00000025264	Tsr2	99	81.675	ENSMPUG00000011436	TSR2	100	81.675	Mustela_putorius_furo
ENSMUSG00000025264	Tsr2	97	77.005	ENSMLUG00000010613	TSR2	97	77.005	Myotis_lucifugus
ENSMUSG00000025264	Tsr2	100	84.375	ENSNGAG00000021351	Tsr2	100	84.375	Nannospalax_galili
ENSMUSG00000025264	Tsr2	100	43.939	ENSNBRG00000007965	tsr2	100	43.939	Neolamprologus_brichardi
ENSMUSG00000025264	Tsr2	99	85.864	ENSNLEG00000030041	TSR2	100	85.864	Nomascus_leucogenys
ENSMUSG00000025264	Tsr2	59	55.263	ENSMEUG00000006729	-	94	54.167	Notamacropus_eugenii
ENSMUSG00000025264	Tsr2	66	78.740	ENSOPRG00000016595	TSR2	100	78.740	Ochotona_princeps
ENSMUSG00000025264	Tsr2	100	77.949	ENSODEG00000000542	-	100	77.949	Octodon_degus
ENSMUSG00000025264	Tsr2	92	72.727	ENSODEG00000019951	-	99	72.727	Octodon_degus
ENSMUSG00000025264	Tsr2	94	77.348	ENSODEG00000014931	-	98	77.348	Octodon_degus
ENSMUSG00000025264	Tsr2	100	43.434	ENSONIG00000000763	tsr2	100	43.434	Oreochromis_niloticus
ENSMUSG00000025264	Tsr2	69	71.212	ENSOANG00000000707	TSR2	93	71.212	Ornithorhynchus_anatinus
ENSMUSG00000025264	Tsr2	86	82.530	ENSOCUG00000014714	-	100	82.530	Oryctolagus_cuniculus
ENSMUSG00000025264	Tsr2	99	84.817	ENSOCUG00000027678	-	100	84.817	Oryctolagus_cuniculus
ENSMUSG00000025264	Tsr2	95	43.716	ENSORLG00000022662	tsr2	96	44.262	Oryzias_latipes
ENSMUSG00000025264	Tsr2	95	43.716	ENSORLG00020003033	tsr2	96	44.262	Oryzias_latipes_hni
ENSMUSG00000025264	Tsr2	95	44.262	ENSORLG00015017253	tsr2	96	44.262	Oryzias_latipes_hsok
ENSMUSG00000025264	Tsr2	100	42.564	ENSOMEG00000011483	tsr2	100	42.564	Oryzias_melastigma
ENSMUSG00000025264	Tsr2	100	42.564	ENSOMEG00000013975	-	100	43.077	Oryzias_melastigma
ENSMUSG00000025264	Tsr2	99	79.058	ENSOGAG00000003468	TSR2	100	79.058	Otolemur_garnettii
ENSMUSG00000025264	Tsr2	93	60.674	ENSOARG00000009487	-	98	60.674	Ovis_aries
ENSMUSG00000025264	Tsr2	100	83.854	ENSOARG00000006467	-	100	83.854	Ovis_aries
ENSMUSG00000025264	Tsr2	99	85.864	ENSPPAG00000021242	TSR2	100	85.864	Pan_paniscus
ENSMUSG00000025264	Tsr2	99	82.723	ENSPPRG00000001337	TSR2	100	82.723	Panthera_pardus
ENSMUSG00000025264	Tsr2	100	82.292	ENSPTIG00000007138	TSR2	100	82.292	Panthera_tigris_altaica
ENSMUSG00000025264	Tsr2	99	85.864	ENSPTRG00000045904	TSR2	100	85.864	Pan_troglodytes
ENSMUSG00000025264	Tsr2	94	80.663	ENSPANG00000002291	-	98	80.663	Papio_anubis
ENSMUSG00000025264	Tsr2	99	85.864	ENSPANG00000008042	-	100	85.864	Papio_anubis
ENSMUSG00000025264	Tsr2	99	42.051	ENSPKIG00000023676	tsr2	100	42.714	Paramormyrops_kingsleyae
ENSMUSG00000025264	Tsr2	99	37.696	ENSPMGG00000002963	tsr2	100	38.660	Periophthalmus_magnuspinnatus
ENSMUSG00000025264	Tsr2	100	92.708	ENSPEMG00000015713	Tsr2	100	92.708	Peromyscus_maniculatus_bairdii
ENSMUSG00000025264	Tsr2	94	41.799	ENSPMAG00000001705	tsr2	92	42.553	Petromyzon_marinus
ENSMUSG00000025264	Tsr2	99	50.990	ENSPCIG00000024314	-	95	50.990	Phascolarctos_cinereus
ENSMUSG00000025264	Tsr2	95	44.211	ENSPFOG00000011824	tsr2	96	44.211	Poecilia_formosa
ENSMUSG00000025264	Tsr2	95	45.161	ENSPLAG00000023520	tsr2	96	45.161	Poecilia_latipinna
ENSMUSG00000025264	Tsr2	98	44.271	ENSPMEG00000000360	tsr2	99	44.271	Poecilia_mexicana
ENSMUSG00000025264	Tsr2	98	45.641	ENSPREG00000013009	tsr2	99	45.641	Poecilia_reticulata
ENSMUSG00000025264	Tsr2	100	85.417	ENSPPYG00000020381	-	72	85.417	Pongo_abelii
ENSMUSG00000025264	Tsr2	99	79.058	ENSPCOG00000002354	TSR2	100	79.058	Propithecus_coquereli
ENSMUSG00000025264	Tsr2	64	81.301	ENSPVAG00000000034	TSR2	100	81.301	Pteropus_vampyrus
ENSMUSG00000025264	Tsr2	100	42.424	ENSPNYG00000019995	tsr2	80	43.939	Pundamilia_nyererei
ENSMUSG00000025264	Tsr2	99	45.876	ENSPNAG00000024167	tsr2	100	45.918	Pygocentrus_nattereri
ENSMUSG00000025264	Tsr2	100	96.354	ENSRNOG00000002556	NEWGENE_1562416	100	96.354	Rattus_norvegicus
ENSMUSG00000025264	Tsr2	99	85.864	ENSRBIG00000024521	-	100	85.864	Rhinopithecus_bieti
ENSMUSG00000025264	Tsr2	100	77.604	ENSRBIG00000003999	-	90	77.604	Rhinopithecus_bieti
ENSMUSG00000025264	Tsr2	100	78.125	ENSRROG00000033469	-	93	78.125	Rhinopithecus_roxellana
ENSMUSG00000025264	Tsr2	99	85.864	ENSRROG00000029439	-	100	85.864	Rhinopithecus_roxellana
ENSMUSG00000025264	Tsr2	99	85.340	ENSSBOG00000019737	TSR2	100	85.340	Saimiri_boliviensis_boliviensis
ENSMUSG00000025264	Tsr2	86	51.515	ENSSHAG00000004824	-	99	51.515	Sarcophilus_harrisii
ENSMUSG00000025264	Tsr2	99	41.414	ENSSFOG00015002207	tsr2	100	42.211	Scleropages_formosus
ENSMUSG00000025264	Tsr2	100	44.615	ENSSMAG00000012882	tsr2	100	45.641	Scophthalmus_maximus
ENSMUSG00000025264	Tsr2	100	45.918	ENSSDUG00000019445	tsr2	100	46.465	Seriola_dumerili
ENSMUSG00000025264	Tsr2	100	45.128	ENSSLDG00000005598	tsr2	100	46.465	Seriola_lalandi_dorsalis
ENSMUSG00000025264	Tsr2	99	47.423	ENSSPUG00000019286	TSR2	99	50.521	Sphenodon_punctatus
ENSMUSG00000025264	Tsr2	99	80.105	ENSSSCG00000012334	TSR2	100	80.105	Sus_scrofa
ENSMUSG00000025264	Tsr2	94	42.935	ENSTRUG00000008947	tsr2	95	42.935	Takifugu_rubripes
ENSMUSG00000025264	Tsr2	90	40.113	ENSTNIG00000002173	-	99	40.000	Tetraodon_nigroviridis
ENSMUSG00000025264	Tsr2	68	80.916	ENSTBEG00000016242	TSR2	100	80.952	Tupaia_belangeri
ENSMUSG00000025264	Tsr2	99	67.539	ENSTTRG00000003274	TSR2	100	67.539	Tursiops_truncatus
ENSMUSG00000025264	Tsr2	99	80.928	ENSUAMG00000009605	TSR2	100	80.928	Ursus_americanus
ENSMUSG00000025264	Tsr2	99	80.928	ENSUMAG00000019189	TSR2	100	80.928	Ursus_maritimus
ENSMUSG00000025264	Tsr2	94	73.889	ENSVPAG00000007532	TSR2	100	73.889	Vicugna_pacos
ENSMUSG00000025264	Tsr2	99	80.412	ENSVVUG00000002247	TSR2	99	80.412	Vulpes_vulpes
ENSMUSG00000025264	Tsr2	99	45.178	ENSXETG00000033574	TSR2	99	47.716	Xenopus_tropicalis
ENSMUSG00000025264	Tsr2	98	45.641	ENSXMAG00000024827	tsr2	90	45.641	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0003674	molecular_function	-	ND	Function
GO:0006364	rRNA processing	-	IEA	Process