EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000025266 (Gene tree)
Gene ID: 237107
Gene Symbol: Gnl3l
Alias: -
Full Name: guanine nucleotide binding protein-like 3 (nucleolar)-like
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 34182 bases
Position: chrX:150983141-151017322
Accession: 2448557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000026297	MMR_HSR1	PF01926.23	7e-16	1	1
ENSMUSP00000108311	MMR_HSR1	PF01926.23	7e-16	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000138026	-	509	-	-	- (aa)	-	-
ENSMUST00000146742	-	642	-	-	- (aa)	-	-
ENSMUST00000124022	-	593	-	ENSMUSP00000138542	35 (aa)	-	S4R289
ENSMUST00000026297	-	4865	-	ENSMUSP00000026297	577 (aa)	-	Q6PGG6
ENSMUST00000112691	-	4869	XM_006528805	ENSMUSP00000108311	577 (aa)	XP_006528868	Q6PGG6
ENSMUST00000156233	-	439	-	ENSMUSP00000117281	68 (aa)	-	A2ALP3
ENSMUST00000154393	-	815	-	ENSMUSP00000138737	164 (aa)	-	S4R2Q1

Gene Model

Click here to download ENSMUSG00000025266's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000025266's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000025266	Gnl3l	75	38.303	ENSMUSG00000042354	Gnl3	86	35.659

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000025266	Gnl3l	100	86.815	ENSG00000130119	GNL3L	100	86.815	Homo_sapiens
ENSMUSG00000025266	Gnl3l	79	64.583	ENSAPOG00000012629	gnl3l	94	48.561	Acanthochromis_polyacanthus
ENSMUSG00000025266	Gnl3l	99	86.332	ENSAMEG00000002528	GNL3L	99	86.332	Ailuropoda_melanoleuca
ENSMUSG00000025266	Gnl3l	89	48.669	ENSACIG00000010900	gnl3l	95	48.669	Amphilophus_citrinellus
ENSMUSG00000025266	Gnl3l	94	49.550	ENSAOCG00000020369	gnl3l	94	49.550	Amphiprion_ocellaris
ENSMUSG00000025266	Gnl3l	94	49.369	ENSAPEG00000023280	gnl3l	94	49.369	Amphiprion_percula
ENSMUSG00000025266	Gnl3l	93	49.278	ENSATEG00000009762	gnl3l	93	49.278	Anabas_testudineus
ENSMUSG00000025266	Gnl3l	95	50.088	ENSACAG00000012525	GNL3L	99	51.379	Anolis_carolinensis
ENSMUSG00000025266	Gnl3l	100	66.031	ENSANAG00000022057	-	100	66.205	Aotus_nancymaae
ENSMUSG00000025266	Gnl3l	99	86.458	ENSANAG00000023117	-	100	86.458	Aotus_nancymaae
ENSMUSG00000025266	Gnl3l	90	50.382	ENSACLG00000021244	gnl3l	91	50.382	Astatotilapia_calliptera
ENSMUSG00000025266	Gnl3l	90	49.906	ENSAMXG00000006376	gnl3l	90	49.906	Astyanax_mexicanus
ENSMUSG00000025266	Gnl3l	100	89.081	ENSBTAG00000031564	GNL3L	100	89.081	Bos_taurus
ENSMUSG00000025266	Gnl3l	100	85.789	ENSCJAG00000000252	GNL3L	100	85.789	Callithrix_jacchus
ENSMUSG00000025266	Gnl3l	100	88.042	ENSCAFG00000016455	GNL3L	89	88.042	Canis_familiaris
ENSMUSG00000025266	Gnl3l	100	88.042	ENSCAFG00020013979	GNL3L	89	88.042	Canis_lupus_dingo
ENSMUSG00000025266	Gnl3l	100	85.616	ENSTSYG00000004110	GNL3L	100	85.616	Carlito_syrichta
ENSMUSG00000025266	Gnl3l	99	82.465	ENSCPOG00000015617	GNL3L	100	82.465	Cavia_porcellus
ENSMUSG00000025266	Gnl3l	98	82.578	ENSCCAG00000023052	GNL3L	94	88.655	Cebus_capucinus
ENSMUSG00000025266	Gnl3l	99	84.391	ENSCATG00000031729	GNL3L	99	84.391	Cercocebus_atys
ENSMUSG00000025266	Gnl3l	86	73.185	ENSCATG00000036833	-	95	73.185	Cercocebus_atys
ENSMUSG00000025266	Gnl3l	99	83.681	ENSCLAG00000003823	GNL3L	100	83.681	Chinchilla_lanigera
ENSMUSG00000025266	Gnl3l	82	89.662	ENSCSAG00000012324	GNL3L	100	89.662	Chlorocebus_sabaeus
ENSMUSG00000025266	Gnl3l	76	41.689	ENSCPBG00000017415	GNL3L	80	42.234	Chrysemys_picta_bellii
ENSMUSG00000025266	Gnl3l	100	64.187	ENSCANG00000015664	-	100	64.187	Colobus_angolensis_palliatus
ENSMUSG00000025266	Gnl3l	99	85.274	ENSCANG00000035316	GNL3L	99	85.274	Colobus_angolensis_palliatus
ENSMUSG00000025266	Gnl3l	100	94.281	ENSCGRG00001017459	Gnl3l	100	94.281	Cricetulus_griseus_chok1gshd
ENSMUSG00000025266	Gnl3l	100	94.281	ENSCGRG00000017708	Gnl3l	100	94.281	Cricetulus_griseus_crigri
ENSMUSG00000025266	Gnl3l	89	50.095	ENSCSEG00000011209	gnl3l	92	50.095	Cynoglossus_semilaevis
ENSMUSG00000025266	Gnl3l	90	49.904	ENSCVAG00000001161	gnl3l	91	49.904	Cyprinodon_variegatus
ENSMUSG00000025266	Gnl3l	95	47.986	ENSDARG00000020595	gnl3l	96	47.986	Danio_rerio
ENSMUSG00000025266	Gnl3l	99	81.488	ENSDNOG00000048230	GNL3L	100	87.260	Dasypus_novemcinctus
ENSMUSG00000025266	Gnl3l	99	83.130	ENSDORG00000029665	Gnl3l	99	83.130	Dipodomys_ordii
ENSMUSG00000025266	Gnl3l	99	70.172	ENSETEG00000019317	GNL3L	99	70.172	Echinops_telfairi
ENSMUSG00000025266	Gnl3l	63	41.667	ENSEBUG00000011390	gnl3l	99	40.336	Eptatretus_burgeri
ENSMUSG00000025266	Gnl3l	99	85.986	ENSEASG00005006957	GNL3L	100	88.610	Equus_asinus_asinus
ENSMUSG00000025266	Gnl3l	100	87.002	ENSECAG00000000035	GNL3L	100	87.002	Equus_caballus
ENSMUSG00000025266	Gnl3l	51	100.000	ENSEEUG00000010951	-	62	100.000	Erinaceus_europaeus
ENSMUSG00000025266	Gnl3l	98	47.521	ENSELUG00000004555	gnl3l	99	47.521	Esox_lucius
ENSMUSG00000025266	Gnl3l	100	88.562	ENSFCAG00000008699	GNL3L	81	88.562	Felis_catus
ENSMUSG00000025266	Gnl3l	100	84.429	ENSFDAG00000020122	GNL3L	99	84.429	Fukomys_damarensis
ENSMUSG00000025266	Gnl3l	98	46.805	ENSGMOG00000018085	gnl3l	99	46.805	Gadus_morhua
ENSMUSG00000025266	Gnl3l	90	49.423	ENSGAFG00000011132	gnl3l	91	49.423	Gambusia_affinis
ENSMUSG00000025266	Gnl3l	98	47.993	ENSGACG00000010320	gnl3l	99	47.993	Gasterosteus_aculeatus
ENSMUSG00000025266	Gnl3l	72	56.386	ENSGAGG00000008638	GNL3L	72	46.384	Gopherus_agassizii
ENSMUSG00000025266	Gnl3l	100	86.130	ENSGGOG00000007550	GNL3L	100	86.130	Gorilla_gorilla
ENSMUSG00000025266	Gnl3l	90	50.382	ENSHBUG00000014227	gnl3l	96	50.388	Haplochromis_burtoni
ENSMUSG00000025266	Gnl3l	100	84.749	ENSHGLG00000001778	GNL3L	100	84.749	Heterocephalus_glaber_female
ENSMUSG00000025266	Gnl3l	86	76.102	ENSHGLG00000010598	-	100	76.102	Heterocephalus_glaber_female
ENSMUSG00000025266	Gnl3l	99	76.491	ENSHGLG00100012564	-	100	76.491	Heterocephalus_glaber_male
ENSMUSG00000025266	Gnl3l	100	84.749	ENSHGLG00100000291	GNL3L	100	84.749	Heterocephalus_glaber_male
ENSMUSG00000025266	Gnl3l	92	49.634	ENSHCOG00000009877	gnl3l	93	50.000	Hippocampus_comes
ENSMUSG00000025266	Gnl3l	98	46.299	ENSIPUG00000015441	gnl3l	99	46.299	Ictalurus_punctatus
ENSMUSG00000025266	Gnl3l	100	89.601	ENSSTOG00000023157	GNL3L	100	89.601	Ictidomys_tridecemlineatus
ENSMUSG00000025266	Gnl3l	98	80.702	ENSJJAG00000011439	Gnl3l	98	80.702	Jaculus_jaculus
ENSMUSG00000025266	Gnl3l	94	48.479	ENSKMAG00000020874	gnl3l	96	48.479	Kryptolebias_marmoratus
ENSMUSG00000025266	Gnl3l	90	48.972	ENSLBEG00000005837	gnl3l	90	48.972	Labrus_bergylta
ENSMUSG00000025266	Gnl3l	90	48.972	ENSLBEG00000018256	gnl3l	90	48.972	Labrus_bergylta
ENSMUSG00000025266	Gnl3l	59	48.451	ENSLACG00000010188	GNL3L	100	48.451	Latimeria_chalumnae
ENSMUSG00000025266	Gnl3l	93	47.865	ENSLOCG00000014702	gnl3l	93	48.043	Lepisosteus_oculatus
ENSMUSG00000025266	Gnl3l	100	84.055	ENSLAFG00000016701	GNL3L	100	84.055	Loxodonta_africana
ENSMUSG00000025266	Gnl3l	100	69.151	ENSMFAG00000046065	-	100	69.151	Macaca_fascicularis
ENSMUSG00000025266	Gnl3l	99	86.106	ENSMFAG00000000499	GNL3L	99	86.106	Macaca_fascicularis
ENSMUSG00000025266	Gnl3l	100	85.641	ENSMMUG00000008231	GNL3L	100	85.641	Macaca_mulatta
ENSMUSG00000025266	Gnl3l	100	69.151	ENSMMUG00000044075	-	100	69.151	Macaca_mulatta
ENSMUSG00000025266	Gnl3l	100	68.804	ENSMNEG00000031230	-	100	68.804	Macaca_nemestrina
ENSMUSG00000025266	Gnl3l	99	86.106	ENSMNEG00000034813	GNL3L	100	86.106	Macaca_nemestrina
ENSMUSG00000025266	Gnl3l	99	80.961	ENSMLEG00000029679	GNL3L	99	80.961	Mandrillus_leucophaeus
ENSMUSG00000025266	Gnl3l	100	68.458	ENSMLEG00000039011	-	100	68.458	Mandrillus_leucophaeus
ENSMUSG00000025266	Gnl3l	89	49.156	ENSMAMG00000023332	gnl3l	96	49.156	Mastacembelus_armatus
ENSMUSG00000025266	Gnl3l	90	50.382	ENSMZEG00005010346	gnl3l	91	50.382	Maylandia_zebra
ENSMUSG00000025266	Gnl3l	100	92.215	ENSMAUG00000013958	Gnl3l	100	92.215	Mesocricetus_auratus
ENSMUSG00000025266	Gnl3l	100	87.158	ENSMICG00000010144	GNL3L	100	87.158	Microcebus_murinus
ENSMUSG00000025266	Gnl3l	100	88.235	ENSMOCG00000021622	Gnl3l	98	88.235	Microtus_ochrogaster
ENSMUSG00000025266	Gnl3l	90	53.019	ENSMODG00000016028	-	100	52.720	Monodelphis_domestica
ENSMUSG00000025266	Gnl3l	98	46.928	ENSMALG00000007353	gnl3l	99	46.928	Monopterus_albus
ENSMUSG00000025266	Gnl3l	100	99.480	MGP_CAROLIEiJ_G0033489	Gnl3l	100	99.480	Mus_caroli
ENSMUSG00000025266	Gnl3l	100	95.960	MGP_PahariEiJ_G0032028	Gnl3l	100	95.960	Mus_pahari
ENSMUSG00000025266	Gnl3l	100	100.000	MGP_SPRETEiJ_G0034659	Gnl3l	100	100.000	Mus_spretus
ENSMUSG00000025266	Gnl3l	99	88.133	ENSMPUG00000011421	GNL3L	100	88.133	Mustela_putorius_furo
ENSMUSG00000025266	Gnl3l	100	81.976	ENSMLUG00000008331	GNL3L	100	81.976	Myotis_lucifugus
ENSMUSG00000025266	Gnl3l	99	91.754	ENSNGAG00000005965	Gnl3l	94	91.754	Nannospalax_galili
ENSMUSG00000025266	Gnl3l	89	50.288	ENSNBRG00000023334	gnl3l	96	50.288	Neolamprologus_brichardi
ENSMUSG00000025266	Gnl3l	100	73.230	ENSNLEG00000031593	-	100	73.230	Nomascus_leucogenys
ENSMUSG00000025266	Gnl3l	99	86.621	ENSNLEG00000016233	GNL3L	99	86.621	Nomascus_leucogenys
ENSMUSG00000025266	Gnl3l	66	75.328	ENSOPRG00000002722	-	68	75.328	Ochotona_princeps
ENSMUSG00000025266	Gnl3l	98	81.593	ENSODEG00000000662	-	100	81.593	Octodon_degus
ENSMUSG00000025266	Gnl3l	100	79.549	ENSODEG00000010311	-	100	79.549	Octodon_degus
ENSMUSG00000025266	Gnl3l	92	83.365	ENSODEG00000007050	-	98	83.365	Octodon_degus
ENSMUSG00000025266	Gnl3l	100	81.109	ENSODEG00000014878	-	100	81.109	Octodon_degus
ENSMUSG00000025266	Gnl3l	98	54.116	ENSOANG00000000700	-	99	54.116	Ornithorhynchus_anatinus
ENSMUSG00000025266	Gnl3l	100	89.255	ENSOCUG00000007408	GNL3L	100	89.255	Oryctolagus_cuniculus
ENSMUSG00000025266	Gnl3l	89	49.903	ENSORLG00000014117	gnl3l	90	49.903	Oryzias_latipes
ENSMUSG00000025266	Gnl3l	96	47.950	ENSORLG00020019295	gnl3l	97	47.950	Oryzias_latipes_hni
ENSMUSG00000025266	Gnl3l	96	48.399	ENSORLG00015014928	gnl3l	97	48.399	Oryzias_latipes_hsok
ENSMUSG00000025266	Gnl3l	90	50.951	ENSOMEG00000023685	gnl3l	91	50.951	Oryzias_melastigma
ENSMUSG00000025266	Gnl3l	99	84.922	ENSOGAG00000016754	GNL3L	100	84.922	Otolemur_garnettii
ENSMUSG00000025266	Gnl3l	75	87.586	ENSOARG00000021138	-	98	87.586	Ovis_aries
ENSMUSG00000025266	Gnl3l	100	86.473	ENSPPAG00000034780	GNL3L	100	86.473	Pan_paniscus
ENSMUSG00000025266	Gnl3l	94	67.463	ENSPPAG00000040301	-	99	67.463	Pan_paniscus
ENSMUSG00000025266	Gnl3l	100	87.329	ENSPPRG00000001783	GNL3L	100	87.329	Panthera_pardus
ENSMUSG00000025266	Gnl3l	100	87.329	ENSPTIG00000007066	GNL3L	99	88.727	Panthera_tigris_altaica
ENSMUSG00000025266	Gnl3l	94	66.606	ENSPTRG00000021940	-	99	66.606	Pan_troglodytes
ENSMUSG00000025266	Gnl3l	100	86.473	ENSPTRG00000050609	GNL3L	100	86.473	Pan_troglodytes
ENSMUSG00000025266	Gnl3l	100	67.764	ENSPANG00000032356	-	100	67.764	Papio_anubis
ENSMUSG00000025266	Gnl3l	94	49.822	ENSPKIG00000012014	gnl3l	87	49.822	Paramormyrops_kingsleyae
ENSMUSG00000025266	Gnl3l	97	47.979	ENSPMGG00000021338	gnl3l	97	47.979	Periophthalmus_magnuspinnatus
ENSMUSG00000025266	Gnl3l	100	95.494	ENSPEMG00000012235	Gnl3l	100	95.494	Peromyscus_maniculatus_bairdii
ENSMUSG00000025266	Gnl3l	98	50.699	ENSPCIG00000006327	-	99	50.699	Phascolarctos_cinereus
ENSMUSG00000025266	Gnl3l	92	49.446	ENSPFOG00000007874	gnl3l	93	49.446	Poecilia_formosa
ENSMUSG00000025266	Gnl3l	92	49.064	ENSPLAG00000021161	gnl3l	93	49.064	Poecilia_latipinna
ENSMUSG00000025266	Gnl3l	92	49.446	ENSPMEG00000024050	gnl3l	93	49.446	Poecilia_mexicana
ENSMUSG00000025266	Gnl3l	84	47.809	ENSPREG00000021994	gnl3l	88	47.953	Poecilia_reticulata
ENSMUSG00000025266	Gnl3l	99	85.962	ENSPPYG00000020383	GNL3L	100	88.224	Pongo_abelii
ENSMUSG00000025266	Gnl3l	75	76.430	ENSPCAG00000005304	GNL3L	75	76.430	Procavia_capensis
ENSMUSG00000025266	Gnl3l	100	88.014	ENSPCOG00000016430	GNL3L	100	88.014	Propithecus_coquereli
ENSMUSG00000025266	Gnl3l	85	87.154	ENSPVAG00000008758	GNL3L	87	87.154	Pteropus_vampyrus
ENSMUSG00000025266	Gnl3l	90	50.191	ENSPNYG00000017256	gnl3l	91	50.191	Pundamilia_nyererei
ENSMUSG00000025266	Gnl3l	97	47.340	ENSPNAG00000005179	gnl3l	96	46.774	Pygocentrus_nattereri
ENSMUSG00000025266	Gnl3l	100	97.920	ENSRNOG00000002509	Gnl3l	100	97.920	Rattus_norvegicus
ENSMUSG00000025266	Gnl3l	99	86.106	ENSRBIG00000041351	GNL3L	100	86.106	Rhinopithecus_bieti
ENSMUSG00000025266	Gnl3l	99	86.106	ENSRROG00000036933	GNL3L	99	86.106	Rhinopithecus_roxellana
ENSMUSG00000025266	Gnl3l	99	85.763	ENSSBOG00000007626	-	100	88.610	Saimiri_boliviensis_boliviensis
ENSMUSG00000025266	Gnl3l	96	49.474	ENSSFOG00015008883	gnl3l	97	49.474	Scleropages_formosus
ENSMUSG00000025266	Gnl3l	96	48.258	ENSSMAG00000014518	gnl3l	97	48.258	Scophthalmus_maximus
ENSMUSG00000025266	Gnl3l	98	47.432	ENSSDUG00000013117	gnl3l	96	47.432	Seriola_dumerili
ENSMUSG00000025266	Gnl3l	94	48.577	ENSSLDG00000012278	gnl3l	96	50.577	Seriola_lalandi_dorsalis
ENSMUSG00000025266	Gnl3l	79	75.991	ENSSARG00000005360	GNL3L	81	75.991	Sorex_araneus
ENSMUSG00000025266	Gnl3l	98	47.414	ENSSPAG00000021373	gnl3l	94	47.414	Stegastes_partitus
ENSMUSG00000025266	Gnl3l	100	89.255	ENSSSCG00000012336	GNL3L	100	84.749	Sus_scrofa
ENSMUSG00000025266	Gnl3l	90	49.064	ENSTRUG00000013131	gnl3l	91	49.064	Takifugu_rubripes
ENSMUSG00000025266	Gnl3l	97	45.068	ENSTNIG00000007323	gnl3l	99	45.068	Tetraodon_nigroviridis
ENSMUSG00000025266	Gnl3l	100	83.733	ENSTTRG00000000881	GNL3L	100	83.733	Tursiops_truncatus
ENSMUSG00000025266	Gnl3l	83	89.027	ENSUAMG00000009526	GNL3L	99	86.759	Ursus_americanus
ENSMUSG00000025266	Gnl3l	100	88.562	ENSUMAG00000019089	GNL3L	100	88.562	Ursus_maritimus
ENSMUSG00000025266	Gnl3l	100	87.868	ENSVVUG00000002172	GNL3L	89	87.868	Vulpes_vulpes
ENSMUSG00000025266	Gnl3l	99	49.313	ENSXETG00000007700	gnl3l	99	49.313	Xenopus_tropicalis
ENSMUSG00000025266	Gnl3l	89	50.000	ENSXCOG00000011839	gnl3l	93	50.000	Xiphophorus_couchianus
ENSMUSG00000025266	Gnl3l	92	48.776	ENSXMAG00000007665	gnl3l	93	48.776	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005697	telomerase holoenzyme complex	-	ISO	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0031397	negative regulation of protein ubiquitination	-	ISO	Process
GO:0031647	regulation of protein stability	-	ISO	Process
GO:0032091	negative regulation of protein binding	-	ISO	Process
GO:0032211	negative regulation of telomere maintenance via telomerase	-	ISO	Process
GO:0033234	negative regulation of protein sumoylation	-	ISO	Process
GO:0042254	ribosome biogenesis	-	IEA	Process
GO:0090073	positive regulation of protein homodimerization activity	-	ISO	Process
GO:1904816	positive regulation of protein localization to chromosome, telomeric region	-	ISO	Process