EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000025278 (Gene tree)
Gene ID: 286940
Gene Symbol: Flnb
Alias: -
Full Name: filamin%2C beta
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 133632
Position: chr14: 7817957-7951588
Accession: 2446089
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000052678	-	9100	XM_006518050	ENSMUSP00000052020	2602 (aa)	XP_006518113	Q80X90
ENSMUST00000228206	-	111	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000025278's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04010	MAPK signaling pathway	KEGG
mmu04510	Focal adhesion	KEGG
mmu05132	Salmonella infection	KEGG
mmu05205	Proteoglycans in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000025278's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000025278	Flnb	100	95.849	ENSG00000136068	FLNB	100	95.849	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001725	stress fiber	11807098.	IDA	Component
GO:0003334	keratinocyte development	24012369.	IMP	Process
GO:0003382	epithelial cell morphogenesis	24012369.	IMP	Process
GO:0003779	actin binding	-	IEA	Function
GO:0005515	protein binding	12393796.24436304.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	12393796.	ISA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005903	brush border	22114352.	IDA	Component
GO:0005925	focal adhesion	11807098.	IDA	Component
GO:0007519	skeletal muscle tissue development	11807098.	IDA	Process
GO:0030036	actin cytoskeleton organization	24012369.	IMP	Process
GO:0030154	cell differentiation	-	IEA	Process
GO:0042802	identical protein binding	-	ISO	Function
GO:0043005	neuron projection	-	ISO	Component
GO:0043025	neuronal cell body	-	ISO	Component
GO:0045335	phagocytic vesicle	19144319.	IDA	Component
GO:0071346	cellular response to interferon-gamma	19144319.	IDA	Process