EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000025366 (Gene tree)
Gene ID: 23943
Gene Symbol: Esyt1
Alias: Fam62a|Mbc2|vp115
Full Name: extended synaptotagmin-like protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 15907
Position: chr10: 128509965-128525871
Accession: 1344426
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000217948	-	2796	-	-	- (aa)	-	-
ENSMUST00000220045	-	3409	-	-	- (aa)	-	-
ENSMUST00000220429	-	2555	-	ENSMUSP00000151519	528 (aa)	-	A0A1W2P784
ENSMUST00000218092	-	4038	-	-	- (aa)	-	-
ENSMUST00000026427	-	3981	-	ENSMUSP00000026427	1092 (aa)	-	Q3U7R1

Gene Model

Click here to download ENSMUSG00000025366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000025366's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000025366	Esyt1	100	86.890	ENSG00000139641	ESYT1	100	96.591	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005509	calcium ion binding	21873635.	IBA	Function
GO:0005515	protein binding	19255425.	IPI	Function
GO:0005544	calcium-dependent phospholipid binding	21873635.	IBA	Function
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0006869	lipid transport	-	IEA	Process
GO:0008289	lipid binding	-	IEA	Function
GO:0008429	phosphatidylethanolamine binding	21873635.	IBA	Function
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0030176	integral component of endoplasmic reticulum membrane	-	ISO	Component
GO:0031210	phosphatidylcholine binding	21873635.	IBA	Function
GO:0031227	intrinsic component of endoplasmic reticulum membrane	21873635.	IBA	Component
GO:0031234	extrinsic component of cytoplasmic side of plasma membrane	21873635.	IBA	Component
GO:0035091	phosphatidylinositol binding	21873635.	IBA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0061817	endoplasmic reticulum-plasma membrane tethering	-	IEA	Process