EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000025764 (Gene tree)
Gene ID: 269424
Gene Symbol: Jade1
Alias: D530048A03Rik|Phf17
Full Name: jade family PHD finger 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 61134
Position: chr3: 41555731-41616864
Accession: 1925835
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000194181	-	542	-	ENSMUSP00000141670	104 (aa)	-	A0A0A6YWS2
ENSMUST00000026865	-	5481	-	ENSMUSP00000026865	834 (aa)	-	Q6ZPI0
ENSMUST00000195846	-	543	-	ENSMUSP00000141711	152 (aa)	-	A0A0A6YWV0
ENSMUST00000195322	-	718	-	-	- (aa)	-	-
ENSMUST00000192300	-	449	-	-	- (aa)	-	-
ENSMUST00000170711	-	2896	-	ENSMUSP00000127113	834 (aa)	-	Q6ZPI0
ENSMUST00000193080	-	434	-	-	- (aa)	-	-
ENSMUST00000163764	-	5584	XM_006500784	ENSMUSP00000128152	834 (aa)	XP_006500847	Q6ZPI0
ENSMUST00000168086	-	4790	-	ENSMUSP00000131441	834 (aa)	-	Q6ZPI0
ENSMUST00000191952	-	3327	-	ENSMUSP00000141499	510 (aa)	-	Q6ZPI0
ENSMUST00000192451	-	491	-	ENSMUSP00000142142	164 (aa)	-	A0A0A6YXU2
ENSMUST00000195200	-	487	-	-	- (aa)	-	-
ENSMUST00000191921	-	774	-	-	- (aa)	-	-
ENSMUST00000194348	-	382	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000025764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000025764's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000123	histone acetyltransferase complex	-	ISO	Component
GO:0003713	transcription coactivator activity	-	ISO	Function
GO:0005634	nucleus	24739512.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	24739512.	IDA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006915	apoptotic process	-	IEA	Process
GO:0016607	nuclear speck	-	ISO	Component
GO:0036064	ciliary basal body	-	ISO	Component
GO:0042995	cell projection	-	IEA	Component
GO:0043966	histone H3 acetylation	-	ISO	Process
GO:0043981	histone H4-K5 acetylation	-	ISO	Process
GO:0043982	histone H4-K8 acetylation	-	ISO	Process
GO:0043983	histone H4-K12 acetylation	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0090090	negative regulation of canonical Wnt signaling pathway	-	ISO	Process
GO:2000134	negative regulation of G1/S transition of mitotic cell cycle	-	ISO	Process