EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000025872 (Gene tree)
Gene ID: 73666
Gene Symbol: Thoc3
Alias: 2410044K02Rik
Full Name: THO complex 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 10013 bases
Position: chr13:54458837-54468849
Accession: 1920916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000026990	eIF2A	PF08662.11	6e-12	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000151158	-	843	-	-	- (aa)	-	-
ENSMUST00000135404	-	465	-	-	- (aa)	-	-
ENSMUST00000026990	-	2335	-	ENSMUSP00000026990	351 (aa)	-	Q8VE80

Gene Model

Click here to download ENSMUSG00000025872's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03013	RNA transport	KEGG
mmu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000025872's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000025872	Thoc3	100	98.860	ENSG00000051596	THOC3	100	98.860	Homo_sapiens
ENSMUSG00000025872	Thoc3	91	93.125	ENSAPOG00000010591	thoc3	99	93.125	Acanthochromis_polyacanthus
ENSMUSG00000025872	Thoc3	99	98.567	ENSAMEG00000006936	THOC3	99	98.567	Ailuropoda_melanoleuca
ENSMUSG00000025872	Thoc3	91	92.812	ENSACIG00000010364	thoc3	99	92.812	Amphilophus_citrinellus
ENSMUSG00000025872	Thoc3	91	92.812	ENSAOCG00000013548	thoc3	99	92.812	Amphiprion_ocellaris
ENSMUSG00000025872	Thoc3	91	92.812	ENSAPEG00000003216	thoc3	99	92.812	Amphiprion_percula
ENSMUSG00000025872	Thoc3	91	92.812	ENSATEG00000017937	thoc3	99	92.812	Anabas_testudineus
ENSMUSG00000025872	Thoc3	100	98.291	ENSANAG00000036291	THOC3	100	98.291	Aotus_nancymaae
ENSMUSG00000025872	Thoc3	91	92.188	ENSACLG00000017219	thoc3	99	92.188	Astatotilapia_calliptera
ENSMUSG00000025872	Thoc3	98	88.338	ENSAMXG00000010750	thoc3	99	92.812	Astyanax_mexicanus
ENSMUSG00000025872	Thoc3	100	98.291	ENSBTAG00000035174	THOC3	100	98.291	Bos_taurus
ENSMUSG00000025872	Thoc3	98	95.335	ENSCJAG00000046031	THOC3	91	95.335	Callithrix_jacchus
ENSMUSG00000025872	Thoc3	100	98.575	ENSCAFG00000014320	THOC3	100	98.575	Canis_familiaris
ENSMUSG00000025872	Thoc3	100	98.575	ENSCAFG00020011477	THOC3	100	98.575	Canis_lupus_dingo
ENSMUSG00000025872	Thoc3	100	98.575	ENSCHIG00000021665	THOC3	100	98.575	Capra_hircus
ENSMUSG00000025872	Thoc3	100	72.080	ENSTSYG00000009507	-	100	72.080	Carlito_syrichta
ENSMUSG00000025872	Thoc3	99	80.000	ENSCPOG00000025805	THOC3	99	83.143	Cavia_porcellus
ENSMUSG00000025872	Thoc3	100	98.291	ENSCATG00000029038	THOC3	100	98.291	Cercocebus_atys
ENSMUSG00000025872	Thoc3	99	98.571	ENSCLAG00000015924	THOC3	99	98.571	Chinchilla_lanigera
ENSMUSG00000025872	Thoc3	100	98.575	ENSCSAG00000009454	THOC3	100	98.575	Chlorocebus_sabaeus
ENSMUSG00000025872	Thoc3	75	98.485	ENSCPBG00000022672	THOC3	81	98.485	Chrysemys_picta_bellii
ENSMUSG00000025872	Thoc3	90	66.246	ENSCSAVG00000011041	-	99	66.246	Ciona_savignyi
ENSMUSG00000025872	Thoc3	100	98.291	ENSCANG00000008964	THOC3	100	98.291	Colobus_angolensis_palliatus
ENSMUSG00000025872	Thoc3	100	97.721	ENSCGRG00001022944	Thoc3	92	97.721	Cricetulus_griseus_chok1gshd
ENSMUSG00000025872	Thoc3	100	97.721	ENSCGRG00000012133	Thoc3	100	97.721	Cricetulus_griseus_crigri
ENSMUSG00000025872	Thoc3	91	92.188	ENSCVAG00000006941	thoc3	99	92.188	Cyprinodon_variegatus
ENSMUSG00000025872	Thoc3	91	91.562	ENSDARG00000056517	thoc3	99	91.562	Danio_rerio
ENSMUSG00000025872	Thoc3	100	98.575	ENSDNOG00000037214	THOC3	100	98.575	Dasypus_novemcinctus
ENSMUSG00000025872	Thoc3	75	99.237	ENSDORG00000014084	Thoc3	89	99.237	Dipodomys_ordii
ENSMUSG00000025872	Thoc3	88	63.548	FBgn0037569	tex	96	63.548	Drosophila_melanogaster
ENSMUSG00000025872	Thoc3	100	95.726	ENSETEG00000020137	THOC3	100	95.726	Echinops_telfairi
ENSMUSG00000025872	Thoc3	91	84.783	ENSEBUG00000004516	thoc3	99	84.783	Eptatretus_burgeri
ENSMUSG00000025872	Thoc3	100	98.291	ENSEASG00005011970	THOC3	100	98.291	Equus_asinus_asinus
ENSMUSG00000025872	Thoc3	100	98.006	ENSECAG00000011555	THOC3	100	98.006	Equus_caballus
ENSMUSG00000025872	Thoc3	91	91.875	ENSELUG00000022058	thoc3	99	91.875	Esox_lucius
ENSMUSG00000025872	Thoc3	91	96.250	ENSFALG00000008536	THOC3	100	91.545	Ficedula_albicollis
ENSMUSG00000025872	Thoc3	99	98.857	ENSFDAG00000015062	THOC3	99	98.857	Fukomys_damarensis
ENSMUSG00000025872	Thoc3	91	91.250	ENSFHEG00000019958	thoc3	99	91.250	Fundulus_heteroclitus
ENSMUSG00000025872	Thoc3	91	91.250	ENSGMOG00000019136	-	99	91.250	Gadus_morhua
ENSMUSG00000025872	Thoc3	90	95.268	ENSGALG00000024172	THOC3	83	95.268	Gallus_gallus
ENSMUSG00000025872	Thoc3	91	91.562	ENSGAFG00000016531	thoc3	97	91.562	Gambusia_affinis
ENSMUSG00000025872	Thoc3	91	92.188	ENSGACG00000016353	thoc3	99	92.188	Gasterosteus_aculeatus
ENSMUSG00000025872	Thoc3	91	95.938	ENSGAGG00000013237	THOC3	99	95.938	Gopherus_agassizii
ENSMUSG00000025872	Thoc3	100	98.291	ENSGGOG00000012127	-	100	98.291	Gorilla_gorilla
ENSMUSG00000025872	Thoc3	91	92.188	ENSHBUG00000023812	thoc3	99	92.188	Haplochromis_burtoni
ENSMUSG00000025872	Thoc3	100	98.291	ENSHGLG00000008773	THOC3	100	98.291	Heterocephalus_glaber_female
ENSMUSG00000025872	Thoc3	100	98.291	ENSHGLG00100013354	THOC3	100	98.291	Heterocephalus_glaber_male
ENSMUSG00000025872	Thoc3	91	89.375	ENSHCOG00000003522	thoc3	99	89.375	Hippocampus_comes
ENSMUSG00000025872	Thoc3	91	91.875	ENSIPUG00000001292	thoc3	94	91.875	Ictalurus_punctatus
ENSMUSG00000025872	Thoc3	100	96.296	ENSJJAG00000010704	Thoc3	100	96.296	Jaculus_jaculus
ENSMUSG00000025872	Thoc3	91	91.875	ENSKMAG00000017815	thoc3	99	91.875	Kryptolebias_marmoratus
ENSMUSG00000025872	Thoc3	91	91.562	ENSLBEG00000006512	thoc3	99	91.562	Labrus_bergylta
ENSMUSG00000025872	Thoc3	91	96.250	ENSLACG00000014556	THOC3	99	96.250	Latimeria_chalumnae
ENSMUSG00000025872	Thoc3	91	94.062	ENSLOCG00000011610	thoc3	99	94.062	Lepisosteus_oculatus
ENSMUSG00000025872	Thoc3	100	98.291	ENSLAFG00000016609	THOC3	100	98.291	Loxodonta_africana
ENSMUSG00000025872	Thoc3	100	98.575	ENSMFAG00000034476	THOC3	100	98.575	Macaca_fascicularis
ENSMUSG00000025872	Thoc3	100	98.575	ENSMMUG00000018737	THOC3	100	98.575	Macaca_mulatta
ENSMUSG00000025872	Thoc3	100	98.575	ENSMNEG00000043023	THOC3	100	98.575	Macaca_nemestrina
ENSMUSG00000025872	Thoc3	100	98.291	ENSMLEG00000002508	THOC3	100	98.291	Mandrillus_leucophaeus
ENSMUSG00000025872	Thoc3	91	93.082	ENSMAMG00000013229	thoc3	99	93.082	Mastacembelus_armatus
ENSMUSG00000025872	Thoc3	91	92.188	ENSMZEG00005020327	thoc3	99	92.188	Maylandia_zebra
ENSMUSG00000025872	Thoc3	75	98.859	ENSMGAG00000004766	THOC3	99	98.859	Meleagris_gallopavo
ENSMUSG00000025872	Thoc3	100	97.436	ENSMAUG00000011225	Thoc3	100	97.436	Mesocricetus_auratus
ENSMUSG00000025872	Thoc3	100	86.040	ENSMICG00000031354	-	100	86.040	Microcebus_murinus
ENSMUSG00000025872	Thoc3	100	98.006	ENSMICG00000028441	-	100	98.006	Microcebus_murinus
ENSMUSG00000025872	Thoc3	100	96.581	ENSMOCG00000015290	Thoc3	100	96.581	Microtus_ochrogaster
ENSMUSG00000025872	Thoc3	91	92.812	ENSMMOG00000000373	thoc3	99	92.812	Mola_mola
ENSMUSG00000025872	Thoc3	95	96.697	ENSMODG00000005339	THOC3	100	94.017	Monodelphis_domestica
ENSMUSG00000025872	Thoc3	94	75.831	ENSMODG00000025275	-	100	75.831	Monodelphis_domestica
ENSMUSG00000025872	Thoc3	91	92.188	ENSMALG00000002645	thoc3	99	92.188	Monopterus_albus
ENSMUSG00000025872	Thoc3	100	100.000	MGP_CAROLIEiJ_G0018534	Thoc3	100	100.000	Mus_caroli
ENSMUSG00000025872	Thoc3	100	99.430	MGP_PahariEiJ_G0019599	Thoc3	100	99.430	Mus_pahari
ENSMUSG00000025872	Thoc3	100	100.000	MGP_SPRETEiJ_G0019414	Thoc3	100	100.000	Mus_spretus
ENSMUSG00000025872	Thoc3	87	96.066	ENSMPUG00000012598	THOC3	86	96.066	Mustela_putorius_furo
ENSMUSG00000025872	Thoc3	100	88.604	ENSMLUG00000026903	-	100	88.604	Myotis_lucifugus
ENSMUSG00000025872	Thoc3	100	91.168	ENSMLUG00000027411	-	100	91.168	Myotis_lucifugus
ENSMUSG00000025872	Thoc3	100	98.291	ENSMLUG00000005412	-	100	98.291	Myotis_lucifugus
ENSMUSG00000025872	Thoc3	100	98.291	ENSNGAG00000010934	-	100	98.291	Nannospalax_galili
ENSMUSG00000025872	Thoc3	99	86.610	ENSNBRG00000013917	thoc3	98	86.610	Neolamprologus_brichardi
ENSMUSG00000025872	Thoc3	100	98.291	ENSNLEG00000000593	THOC3	100	98.291	Nomascus_leucogenys
ENSMUSG00000025872	Thoc3	91	72.100	ENSMEUG00000013439	-	98	72.100	Notamacropus_eugenii
ENSMUSG00000025872	Thoc3	91	98.442	ENSMEUG00000001068	THOC3	100	93.162	Notamacropus_eugenii
ENSMUSG00000025872	Thoc3	99	98.571	ENSODEG00000010186	THOC3	99	98.571	Octodon_degus
ENSMUSG00000025872	Thoc3	91	92.812	ENSONIG00000004291	thoc3	99	92.812	Oreochromis_niloticus
ENSMUSG00000025872	Thoc3	100	98.006	ENSOCUG00000016387	THOC3	100	98.006	Oryctolagus_cuniculus
ENSMUSG00000025872	Thoc3	91	93.125	ENSORLG00000030384	thoc3	91	93.125	Oryzias_latipes
ENSMUSG00000025872	Thoc3	91	93.125	ENSORLG00020016372	thoc3	99	93.125	Oryzias_latipes_hni
ENSMUSG00000025872	Thoc3	91	93.125	ENSORLG00015000336	thoc3	99	93.125	Oryzias_latipes_hsok
ENSMUSG00000025872	Thoc3	91	93.438	ENSOMEG00000021977	thoc3	99	93.438	Oryzias_melastigma
ENSMUSG00000025872	Thoc3	100	98.575	ENSOGAG00000003503	THOC3	100	98.575	Otolemur_garnettii
ENSMUSG00000025872	Thoc3	100	95.726	ENSOARG00000016600	THOC3	100	95.726	Ovis_aries
ENSMUSG00000025872	Thoc3	100	98.860	ENSPPAG00000006020	THOC3	100	98.860	Pan_paniscus
ENSMUSG00000025872	Thoc3	100	98.575	ENSPPRG00000020316	THOC3	100	98.575	Panthera_pardus
ENSMUSG00000025872	Thoc3	75	100.000	ENSPTIG00000011325	THOC3	75	100.000	Panthera_tigris_altaica
ENSMUSG00000025872	Thoc3	100	98.860	ENSPTRG00000017594	THOC3	100	98.860	Pan_troglodytes
ENSMUSG00000025872	Thoc3	100	98.291	ENSPANG00000012114	THOC3	100	98.291	Papio_anubis
ENSMUSG00000025872	Thoc3	91	92.188	ENSPKIG00000000208	thoc3	99	92.188	Paramormyrops_kingsleyae
ENSMUSG00000025872	Thoc3	91	89.688	ENSPMGG00000017949	thoc3	99	89.688	Periophthalmus_magnuspinnatus
ENSMUSG00000025872	Thoc3	100	97.721	ENSPEMG00000003118	Thoc3	100	97.721	Peromyscus_maniculatus_bairdii
ENSMUSG00000025872	Thoc3	90	86.984	ENSPMAG00000007069	thoc3	98	86.984	Petromyzon_marinus
ENSMUSG00000025872	Thoc3	97	87.427	ENSPFOG00000007685	thoc3	98	87.427	Poecilia_formosa
ENSMUSG00000025872	Thoc3	91	91.562	ENSPLAG00000003581	thoc3	97	91.562	Poecilia_latipinna
ENSMUSG00000025872	Thoc3	91	91.562	ENSPMEG00000005565	thoc3	97	91.562	Poecilia_mexicana
ENSMUSG00000025872	Thoc3	91	91.562	ENSPREG00000014916	thoc3	92	91.562	Poecilia_reticulata
ENSMUSG00000025872	Thoc3	100	98.575	ENSPPYG00000016066	THOC3	100	98.575	Pongo_abelii
ENSMUSG00000025872	Thoc3	100	98.575	ENSPCOG00000023245	THOC3	100	98.575	Propithecus_coquereli
ENSMUSG00000025872	Thoc3	100	98.006	ENSPVAG00000012450	THOC3	100	98.006	Pteropus_vampyrus
ENSMUSG00000025872	Thoc3	91	92.188	ENSPNYG00000016612	thoc3	99	92.188	Pundamilia_nyererei
ENSMUSG00000025872	Thoc3	91	91.562	ENSPNAG00000005252	thoc3	99	91.562	Pygocentrus_nattereri
ENSMUSG00000025872	Thoc3	100	99.430	ENSRNOG00000000104	Thoc3	100	99.430	Rattus_norvegicus
ENSMUSG00000025872	Thoc3	100	98.575	ENSRBIG00000039571	THOC3	100	98.575	Rhinopithecus_bieti
ENSMUSG00000025872	Thoc3	100	98.575	ENSRROG00000031032	THOC3	100	98.575	Rhinopithecus_roxellana
ENSMUSG00000025872	Thoc3	100	98.291	ENSSBOG00000022663	THOC3	100	98.291	Saimiri_boliviensis_boliviensis
ENSMUSG00000025872	Thoc3	97	93.567	ENSSHAG00000010757	THOC3	95	93.567	Sarcophilus_harrisii
ENSMUSG00000025872	Thoc3	97	70.145	ENSSHAG00000013075	-	99	70.145	Sarcophilus_harrisii
ENSMUSG00000025872	Thoc3	93	93.846	ENSSFOG00015001867	thoc3	94	93.846	Scleropages_formosus
ENSMUSG00000025872	Thoc3	91	93.438	ENSSMAG00000006786	thoc3	99	93.438	Scophthalmus_maximus
ENSMUSG00000025872	Thoc3	91	93.125	ENSSDUG00000008924	thoc3	99	93.125	Seriola_dumerili
ENSMUSG00000025872	Thoc3	91	93.125	ENSSLDG00000019128	thoc3	99	93.125	Seriola_lalandi_dorsalis
ENSMUSG00000025872	Thoc3	91	95.312	ENSSPUG00000006652	THOC3	99	95.312	Sphenodon_punctatus
ENSMUSG00000025872	Thoc3	91	93.438	ENSSPAG00000014229	thoc3	99	93.438	Stegastes_partitus
ENSMUSG00000025872	Thoc3	100	98.575	ENSSSCG00000014061	THOC3	100	98.575	Sus_scrofa
ENSMUSG00000025872	Thoc3	89	94.888	ENSTGUG00000000557	THOC3	99	94.888	Taeniopygia_guttata
ENSMUSG00000025872	Thoc3	100	84.986	ENSTRUG00000002925	thoc3	100	84.986	Takifugu_rubripes
ENSMUSG00000025872	Thoc3	91	90.000	ENSTNIG00000012958	thoc3	99	90.000	Tetraodon_nigroviridis
ENSMUSG00000025872	Thoc3	75	100.000	ENSTTRG00000014865	THOC3	100	100.000	Tursiops_truncatus
ENSMUSG00000025872	Thoc3	100	98.291	ENSUAMG00000010691	THOC3	100	98.291	Ursus_americanus
ENSMUSG00000025872	Thoc3	98	99.128	ENSUMAG00000024511	THOC3	100	99.128	Ursus_maritimus
ENSMUSG00000025872	Thoc3	90	88.644	ENSXETG00000022316	thoc3	98	88.644	Xenopus_tropicalis
ENSMUSG00000025872	Thoc3	91	91.562	ENSXCOG00000001378	thoc3	99	91.562	Xiphophorus_couchianus
ENSMUSG00000025872	Thoc3	91	91.562	ENSXMAG00000003232	thoc3	97	91.562	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000346	transcription export complex	-	ISO	Component
GO:0000445	THO complex part of transcription export complex	21873635.	IBA	Component
GO:0000445	THO complex part of transcription export complex	-	ISO	Component
GO:0000784	nuclear chromosome, telomeric region	-	ISO	Component
GO:0003723	RNA binding	-	IEA	Function
GO:0005515	protein binding	24315442.	IPI	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0006406	mRNA export from nucleus	21873635.	IBA	Process
GO:0006406	mRNA export from nucleus	-	ISO	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0046784	viral mRNA export from host cell nucleus	-	ISO	Process
GO:0051028	mRNA transport	-	IEA	Process