EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000025950 (Gene tree)
Gene ID: 15926
Gene Symbol: Idh1
Alias: E030024J03Rik|IDPc|Id-1|Idh-1
Full Name: isocitrate dehydrogenase 1 (NADP+)%2C soluble
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 27885
Position: chr1: 65158616-65186500
Accession: 96413
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000186222	-	573	-	ENSMUSP00000140694	84 (aa)	-	A0A087WRM4
ENSMUST00000188876	-	844	-	ENSMUSP00000139906	187 (aa)	-	A0A087WPT4
ENSMUST00000188109	-	756	-	ENSMUSP00000140757	202 (aa)	-	A0A087WRS9
ENSMUST00000169032	-	2283	-	ENSMUSP00000127307	414 (aa)	-	O88844
ENSMUST00000149310	-	499	-	ENSMUSP00000117853	143 (aa)	-	D3YVY3
ENSMUST00000191459	-	372	-	ENSMUSP00000139430	19 (aa)	-	A0A087WNN7
ENSMUST00000097709	-	2302	-	ENSMUSP00000095316	414 (aa)	-	O88844

Gene Model

Click here to download ENSMUSG00000025950's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00020	Citrate cycle (TCA cycle)	KEGG
mmu00480	Glutathione metabolism	KEGG
mmu01100	Metabolic pathways	KEGG
mmu01200	Carbon metabolism	KEGG
mmu01210	2-Oxocarboxylic acid metabolism	KEGG
mmu01230	Biosynthesis of amino acids	KEGG
mmu04146	Peroxisome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000025950's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000025950	Idh1	100	77.622	FBgn0001248	Idh	99	72.573	Drosophila_melanogaster
ENSMUSG00000025950	Idh1	94	79.104	ENSMUSG00000030541	Idh2	100	68.874	Mus_musculus
ENSMUSG00000025950	Idh1	94	74.627	YDL066W		93	66.584	Saccharomyces_cerevisiae
ENSMUSG00000025950	Idh1	94	74.627	YNL009W		94	60.804	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000287	magnesium ion binding	-	ISO	Function
GO:0004448	isocitrate dehydrogenase activity	18275837.	IDA	Function
GO:0004450	isocitrate dehydrogenase (NADP+) activity	21873635.	IBA	Function
GO:0004450	isocitrate dehydrogenase (NADP+) activity	1180875.1914521.12031902.	IDA	Function
GO:0004450	isocitrate dehydrogenase (NADP+) activity	-	ISO	Function
GO:0005102	signaling receptor binding	-	ISO	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	18275837.	IDA	Component
GO:0005777	peroxisome	21873635.	IBA	Component
GO:0005777	peroxisome	-	ISO	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0005829	cytosol	12031902.	IDA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006097	glyoxylate cycle	-	IEA	Process
GO:0006099	tricarboxylic acid cycle	-	IEA	Process
GO:0006102	isocitrate metabolic process	21873635.	IBA	Process
GO:0006102	isocitrate metabolic process	-	ISO	Process
GO:0006103	2-oxoglutarate metabolic process	-	ISO	Process
GO:0006739	NADP metabolic process	21873635.	IBA	Process
GO:0006749	glutathione metabolic process	12031902.	IMP	Process
GO:0006979	response to oxidative stress	12031902.	IDA	Process
GO:0014070	response to organic cyclic compound	-	ISO	Process
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	-	IEA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0042803	protein homodimerization activity	21873635.	IBA	Function
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0048545	response to steroid hormone	21873635.	IBA	Process
GO:0048545	response to steroid hormone	-	ISO	Process
GO:0050661	NADP binding	-	ISO	Function
GO:0051287	NAD binding	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process
GO:0060696	regulation of phospholipid catabolic process	21873635.	IBA	Process
GO:0060696	regulation of phospholipid catabolic process	25218477.	IMP	Process
GO:0071071	regulation of phospholipid biosynthetic process	21873635.	IBA	Process
GO:0071071	regulation of phospholipid biosynthetic process	25218477.	IMP	Process