EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000025958 (Gene tree)
Gene ID: 12912
Gene Symbol: Creb1
Alias: 2310001E10Rik|3526402H21Rik|Creb|Creb-1
Full Name: cAMP responsive element binding protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 71904
Position: chr1: 64532645-64604548
Accession: 88494
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000190348	-	1260	-	ENSMUSP00000140112	341 (aa)	-	Q01147
ENSMUST00000185594	-	1569	XM_006495651	ENSMUSP00000139995	327 (aa)	XP_006495714	Q01147
ENSMUST00000190876	-	1420	-	ENSMUSP00000140189	90 (aa)	-	Q61441
ENSMUST00000049932	-	5009	XM_006495650	ENSMUSP00000059973	341 (aa)	XP_006495713	Q01147
ENSMUST00000171164	-	1287	XM_011238424	ENSMUSP00000132860	287 (aa)	XP_011236726	Q62347
ENSMUST00000187035	-	1642	-	-	- (aa)	-	-
ENSMUST00000087366	-	8364	XM_006495654	ENSMUSP00000084624	327 (aa)	XP_006495717	Q01147
ENSMUST00000187811	-	1255	-	ENSMUSP00000140649	317 (aa)	-	A0A087WRI6
ENSMUST00000188855	-	660	-	-	- (aa)	-	-
ENSMUST00000190979	-	2763	-	-	- (aa)	-	-
ENSMUST00000186335	-	1288	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000025958's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04022	cGMP-PKG signaling pathway	KEGG
mmu04024	cAMP signaling pathway	KEGG
mmu04151	PI3K-Akt signaling pathway	KEGG
mmu04152	AMPK signaling pathway	KEGG
mmu04211	Longevity regulating pathway	KEGG
mmu04261	Adrenergic signaling in cardiomyocytes	KEGG
mmu04380	Osteoclast differentiation	KEGG
mmu04612	Antigen processing and presentation	KEGG
mmu04668	TNF signaling pathway	KEGG
mmu04710	Circadian rhythm	KEGG
mmu04713	Circadian entrainment	KEGG
mmu04714	Thermogenesis	KEGG
mmu04725	Cholinergic synapse	KEGG
mmu04728	Dopaminergic synapse	KEGG
mmu04911	Insulin secretion	KEGG
mmu04915	Estrogen signaling pathway	KEGG
mmu04916	Melanogenesis	KEGG
mmu04918	Thyroid hormone synthesis	KEGG
mmu04922	Glucagon signaling pathway	KEGG
mmu04924	Renin secretion	KEGG
mmu04925	Aldosterone synthesis and secretion	KEGG
mmu04926	Relaxin signaling pathway	KEGG
mmu04927	Cortisol synthesis and secretion	KEGG
mmu04928	Parathyroid hormone synthesis, secretion and action	KEGG
mmu04931	Insulin resistance	KEGG
mmu04934	Cushing syndrome	KEGG
mmu04962	Vasopressin-regulated water reabsorption	KEGG
mmu05016	Huntington disease	KEGG
mmu05030	Cocaine addiction	KEGG
mmu05031	Amphetamine addiction	KEGG
mmu05034	Alcoholism	KEGG
mmu05152	Tuberculosis	KEGG
mmu05161	Hepatitis B	KEGG
mmu05163	Human cytomegalovirus infection	KEGG
mmu05165	Human papillomavirus infection	KEGG
mmu05166	Human T-cell leukemia virus 1 infection	KEGG
mmu05167	Kaposi sarcoma-associated herpesvirus infection	KEGG
mmu05203	Viral carcinogenesis	KEGG
mmu05215	Prostate cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000025958's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000785	chromatin	-	ISO	Component
GO:0000790	nuclear chromatin	16427017.	IDA	Component
GO:0000790	nuclear chromatin	20876357.	IMP	Component
GO:0000790	nuclear chromatin	-	ISO	Component
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISO	Function
GO:0000980	RNA polymerase II distal enhancer sequence-specific DNA binding	-	ISO	Function
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	-	ISO	Function
GO:0001102	RNA polymerase II activating transcription factor binding	-	ISO	Function
GO:0001225	RNA polymerase II transcription coactivator binding	-	ISO	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	20876357.	IMP	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	-	ISO	Function
GO:0003677	DNA binding	11354513.14594818.	IDA	Function
GO:0003690	double-stranded DNA binding	-	ISO	Function
GO:0003700	DNA-binding transcription factor activity	12220541.	IDA	Function
GO:0003700	DNA-binding transcription factor activity	8798441.	ISO	Function
GO:0005515	protein binding	17525731.17550780.18511691.21072211.21728997.24315104.	IPI	Function
GO:0005634	nucleus	7565774.14517290.15817708.15927180.16251435.21408140.21728997.	IDA	Component
GO:0005634	nucleus	8798441.19033670.	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005667	transcription factor complex	21873635.	IBA	Component
GO:0005667	transcription factor complex	11354513.	IDA	Component
GO:0005667	transcription factor complex	-	ISO	Component
GO:0005719	nuclear euchromatin	-	ISO	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005759	mitochondrial matrix	-	ISO	Component
GO:0006355	regulation of transcription, DNA-templated	12220541.	IDA	Process
GO:0006366	transcription by RNA polymerase II	-	ISO	Process
GO:0006468	protein phosphorylation	8798441.	ISO	Process
GO:0007179	transforming growth factor beta receptor signaling pathway	-	ISO	Process
GO:0007409	axonogenesis	11988169.	IMP	Process
GO:0007595	lactation	16141355.	IMP	Process
GO:0007613	memory	23223304.	IMP	Process
GO:0007613	memory	-	ISO	Process
GO:0007623	circadian rhythm	20852621.	IDA	Process
GO:0008134	transcription factor binding	-	ISO	Function
GO:0008361	regulation of cell size	12015964.	IGI	Process
GO:0008542	visual learning	-	ISO	Process
GO:0010033	response to organic substance	8798441.	ISO	Process
GO:0010629	negative regulation of gene expression	-	ISO	Process
GO:0010944	negative regulation of transcription by competitive promoter binding	-	ISO	Process
GO:0019899	enzyme binding	-	ISO	Function
GO:0021983	pituitary gland development	16141355.	IMP	Process
GO:0030154	cell differentiation	-	IEA	Process
GO:0030424	axon	-	ISO	Component
GO:0030544	Hsp70 protein binding	-	ISO	Function
GO:0030879	mammary gland development	16141355.	IMP	Process
GO:0032916	positive regulation of transforming growth factor beta3 production	-	ISO	Process
GO:0033363	secretory granule organization	21408140.	IMP	Process
GO:0033762	response to glucagon	20852621.	IMP	Process
GO:0034670	chemotaxis to arachidonic acid	-	ISO	Process
GO:0035035	histone acetyltransferase binding	-	ISO	Function
GO:0035497	cAMP response element binding	-	ISO	Function
GO:0035729	cellular response to hepatocyte growth factor stimulus	21072211.	IDA	Process
GO:0040018	positive regulation of multicellular organism growth	16141355.	IMP	Process
GO:0042493	response to drug	9098922.	IDA	Process
GO:0042752	regulation of circadian rhythm	-	ISO	Process
GO:0042802	identical protein binding	-	ISO	Function
GO:0042981	regulation of apoptotic process	-	ISO	Process
GO:0043065	positive regulation of apoptotic process	-	ISO	Process
GO:0043565	sequence-specific DNA binding	15030764.	IDA	Function
GO:0043565	sequence-specific DNA binding	-	ISO	Function
GO:0044212	transcription regulatory region DNA binding	-	ISO	Function
GO:0045600	positive regulation of fat cell differentiation	21728997.	IGI	Process
GO:0045672	positive regulation of osteoclast differentiation	23395171.	IDA	Process
GO:0045893	positive regulation of transcription, DNA-templated	21728997.	IGI	Process
GO:0045899	positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	-	ISO	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	18252718.20852621.	IDA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	20876357.	IMP	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	8798441.	ISO	Process
GO:0046887	positive regulation of hormone secretion	16141355.	IMP	Process
GO:0046889	positive regulation of lipid biosynthetic process	21728997.	IGI	Process
GO:0048145	regulation of fibroblast proliferation	-	ISO	Process
GO:0048511	rhythmic process	-	IEA	Process
GO:0050821	protein stabilization	21728997.	IMP	Process
GO:0055025	positive regulation of cardiac muscle tissue development	24364879.	IMP	Process
GO:0060251	regulation of glial cell proliferation	-	ISO	Process
GO:0060428	lung epithelium development	21408140.	IMP	Process
GO:0060430	lung saccule development	21408140.	IMP	Process
GO:0060509	type I pneumocyte differentiation	21408140.	IMP	Process
GO:0071294	cellular response to zinc ion	23716681.	IDA	Process
GO:0071300	cellular response to retinoic acid	20876357.	IMP	Process
GO:0071363	cellular response to growth factor stimulus	16427017.	IDA	Process
GO:1900273	positive regulation of long-term synaptic potentiation	-	ISO	Process
GO:1901215	negative regulation of neuron death	-	ISO	Process
GO:1990589	ATF4-CREB1 transcription factor complex	12871976.	IDA	Component
GO:1990589	ATF4-CREB1 transcription factor complex	-	ISO	Component
GO:1990763	arrestin family protein binding	-	ISO	Function
GO:1990830	cellular response to leukemia inhibitory factor	20439489.	IEP	Process