EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000025968 (Gene tree)
Gene ID: 227197
Gene Symbol: Ndufs1
Alias: 5830412M15Rik|9930026A05Rik
Full Name: NADH:ubiquinone oxidoreductase core subunit S1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 33238
Position: chr1: 63143596-63176833
Accession: 2443241
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000027111	-	2661	-	ENSMUSP00000027111	727 (aa)	-	Q91VD9
ENSMUST00000140612	-	1922	-	-	- (aa)	-	-
ENSMUST00000188370	-	516	-	ENSMUSP00000139664	135 (aa)	-	A0A087WP77
ENSMUST00000185732	-	651	-	ENSMUSP00000140307	118 (aa)	-	A0A087WQR0
ENSMUST00000185827	-	1775	-	-	- (aa)	-	-
ENSMUST00000190095	-	1366	-	-	- (aa)	-	-
ENSMUST00000185847	-	655	-	ENSMUSP00000141190	61 (aa)	-	A0A087WSU3
ENSMUST00000189664	-	332	-	ENSMUSP00000140819	19 (aa)	-	A0A087WRY4
ENSMUST00000168099	-	2590	XM_006495952	ENSMUSP00000126621	727 (aa)	XP_006496015	Q91VD9
ENSMUST00000186569	-	2610	-	-	- (aa)	-	-
ENSMUST00000187756	-	493	-	ENSMUSP00000140072	62 (aa)	-	A0A087WQ77
ENSMUST00000187835	-	826	-	-	- (aa)	-	-
ENSMUST00000185412	-	368	-	ENSMUSP00000140467	79 (aa)	-	A0A087WR47

Gene Model

Click here to download ENSMUSG00000025968's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00190	Oxidative phosphorylation	KEGG
mmu01100	Metabolic pathways	KEGG
mmu04714	Thermogenesis	KEGG
mmu04723	Retrograde endocannabinoid signaling	KEGG
mmu04932	Non-alcoholic fatty liver disease (NAFLD)	KEGG
mmu05010	Alzheimer disease	KEGG
mmu05012	Parkinson disease	KEGG
mmu05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000025968's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000025968	Ndufs1	100	94.085	ENSG00000023228	NDUFS1	100	94.627	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003954	NADH dehydrogenase activity	21873635.	IBA	Function
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005743	mitochondrial inner membrane	-	IEA	Component
GO:0005747	mitochondrial respiratory chain complex I	21873635.	IBA	Component
GO:0005747	mitochondrial respiratory chain complex I	-	ISO	Component
GO:0005758	mitochondrial intermembrane space	-	ISO	Component
GO:0008137	NADH dehydrogenase (ubiquinone) activity	21873635.	IBA	Function
GO:0008137	NADH dehydrogenase (ubiquinone) activity	-	ISO	Function
GO:0008637	apoptotic mitochondrial changes	-	ISO	Process
GO:0009055	electron transfer activity	-	IEA	Function
GO:0016020	membrane	-	IEA	Component
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0016651	oxidoreductase activity, acting on NAD(P)H	-	IEA	Function
GO:0042773	ATP synthesis coupled electron transport	-	IEA	Process
GO:0043209	myelin sheath	17634366.	HDA	Component
GO:0045272	plasma membrane respiratory chain complex I	21873635.	IBA	Component
GO:0045333	cellular respiration	21873635.	IBA	Process
GO:0045333	cellular respiration	-	ISO	Process
GO:0046034	ATP metabolic process	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051536	iron-sulfur cluster binding	-	IEA	Function
GO:0051537	2 iron, 2 sulfur cluster binding	-	IEA	Function
GO:0051539	4 iron, 4 sulfur cluster binding	21873635.	IBA	Function
GO:0051881	regulation of mitochondrial membrane potential	-	ISO	Process
GO:0055114	oxidation-reduction process	-	IEA	Process
GO:0070469	respiratory chain	-	IEA	Component
GO:0072593	reactive oxygen species metabolic process	-	ISO	Process