EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026058 (Gene tree)
Gene ID: 170771
Gene Symbol: Khdrbs2
Alias: 6330586C16Rik|SLM-1
Full Name: KH domain containing%2C RNA binding%2C signal transduction associated 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 485855 bases
Position: chr1:32172714-32658568
Accession: 2159649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000027226	KH_1	PF00013.29	7.3e-09	1	1
ENSMUSP00000140157	KH_1	PF00013.29	8.3e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000185666	-	543	-	ENSMUSP00000140451	92 (aa)	-	A0A087WR32
ENSMUST00000027226	-	2281	-	ENSMUSP00000027226	349 (aa)	-	Q9WU01
ENSMUST00000186984	-	275	-	-	- (aa)	-	-
ENSMUST00000188257	-	5278	-	ENSMUSP00000140157	193 (aa)	-	Q9WU01
ENSMUST00000189878	-	3259	-	ENSMUSP00000141095	91 (aa)	-	A0A087WSL3

Gene Model

Click here to download ENSMUSG00000026058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026058's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000026058	Khdrbs2	64	37.395	ENSMUSG00000062078	Qk	59	41.053
ENSMUSG00000026058	Khdrbs2	99	59.669	ENSMUSG00000028790	Khdrbs1	78	61.473
ENSMUSG00000026058	Khdrbs2	99	66.479	ENSMUSG00000022332	Khdrbs3	100	84.127

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026058	Khdrbs2	100	95.415	ENSG00000112232	KHDRBS2	100	95.415	Homo_sapiens
ENSMUSG00000026058	Khdrbs2	100	68.466	ENSAPOG00000008806	khdrbs2	100	67.898	Acanthochromis_polyacanthus
ENSMUSG00000026058	Khdrbs2	77	95.556	ENSAMEG00000007111	KHDRBS2	100	95.556	Ailuropoda_melanoleuca
ENSMUSG00000026058	Khdrbs2	100	67.614	ENSACIG00000020525	khdrbs2	100	66.856	Amphilophus_citrinellus
ENSMUSG00000026058	Khdrbs2	100	67.614	ENSAOCG00000011333	khdrbs2	100	66.761	Amphiprion_ocellaris
ENSMUSG00000026058	Khdrbs2	96	64.897	ENSAPEG00000019843	khdrbs2	100	63.314	Amphiprion_percula
ENSMUSG00000026058	Khdrbs2	100	68.182	ENSATEG00000020863	khdrbs2	100	67.236	Anabas_testudineus
ENSMUSG00000026058	Khdrbs2	100	91.117	ENSAPLG00000013452	KHDRBS2	100	90.258	Anas_platyrhynchos
ENSMUSG00000026058	Khdrbs2	100	87.679	ENSACAG00000006691	KHDRBS2	100	86.819	Anolis_carolinensis
ENSMUSG00000026058	Khdrbs2	85	96.296	ENSANAG00000024792	KHDRBS2	99	96.296	Aotus_nancymaae
ENSMUSG00000026058	Khdrbs2	100	69.122	ENSACLG00000002710	khdrbs2	100	68.555	Astatotilapia_calliptera
ENSMUSG00000026058	Khdrbs2	88	74.434	ENSAMXG00000009582	khdrbs2	89	74.434	Astyanax_mexicanus
ENSMUSG00000026058	Khdrbs2	100	90.544	ENSBTAG00000043990	KHDRBS2	100	91.691	Bos_taurus
ENSMUSG00000026058	Khdrbs2	100	95.989	ENSCJAG00000001766	KHDRBS2	100	95.989	Callithrix_jacchus
ENSMUSG00000026058	Khdrbs2	100	94.842	ENSCAFG00000002470	KHDRBS2	100	94.842	Canis_familiaris
ENSMUSG00000026058	Khdrbs2	100	94.842	ENSCAFG00020015926	KHDRBS2	100	94.842	Canis_lupus_dingo
ENSMUSG00000026058	Khdrbs2	100	89.971	ENSCHIG00000024242	KHDRBS2	100	89.971	Capra_hircus
ENSMUSG00000026058	Khdrbs2	91	96.226	ENSTSYG00000007203	KHDRBS2	91	96.226	Carlito_syrichta
ENSMUSG00000026058	Khdrbs2	91	93.396	ENSCPOG00000025621	KHDRBS2	100	93.396	Cavia_porcellus
ENSMUSG00000026058	Khdrbs2	100	79.656	ENSCCAG00000037746	KHDRBS2	100	81.089	Cebus_capucinus
ENSMUSG00000026058	Khdrbs2	100	95.989	ENSCATG00000042976	KHDRBS2	100	95.989	Cercocebus_atys
ENSMUSG00000026058	Khdrbs2	91	94.969	ENSCLAG00000000509	KHDRBS2	100	94.969	Chinchilla_lanigera
ENSMUSG00000026058	Khdrbs2	77	95.926	ENSCSAG00000013462	KHDRBS2	98	95.926	Chlorocebus_sabaeus
ENSMUSG00000026058	Khdrbs2	100	67.908	ENSCHOG00000013616	KHDRBS2	100	67.622	Choloepus_hoffmanni
ENSMUSG00000026058	Khdrbs2	100	92.550	ENSCPBG00000022649	KHDRBS2	100	91.691	Chrysemys_picta_bellii
ENSMUSG00000026058	Khdrbs2	100	95.989	ENSCANG00000021348	KHDRBS2	100	95.989	Colobus_angolensis_palliatus
ENSMUSG00000026058	Khdrbs2	100	97.994	ENSCGRG00001022657	Khdrbs2	100	97.994	Cricetulus_griseus_chok1gshd
ENSMUSG00000026058	Khdrbs2	77	97.778	ENSCGRG00000003079	-	96	97.778	Cricetulus_griseus_crigri
ENSMUSG00000026058	Khdrbs2	100	59.026	ENSCSEG00000005064	khdrbs2	100	62.286	Cynoglossus_semilaevis
ENSMUSG00000026058	Khdrbs2	77	85.638	ENSCVAG00000020560	khdrbs2	99	82.266	Cyprinodon_variegatus
ENSMUSG00000026058	Khdrbs2	100	73.429	ENSDARG00000069469	khdrbs2	100	73.143	Danio_rerio
ENSMUSG00000026058	Khdrbs2	100	95.702	ENSDNOG00000014028	KHDRBS2	100	95.702	Dasypus_novemcinctus
ENSMUSG00000026058	Khdrbs2	94	86.239	ENSDORG00000005701	Khdrbs2	100	87.421	Dipodomys_ordii
ENSMUSG00000026058	Khdrbs2	100	77.077	ENSETEG00000002241	KHDRBS2	100	77.077	Echinops_telfairi
ENSMUSG00000026058	Khdrbs2	79	49.324	ENSEBUG00000012421	khdrbs2	99	47.766	Eptatretus_burgeri
ENSMUSG00000026058	Khdrbs2	93	54.942	ENSEBUG00000007730	khdrbs2	98	52.614	Eptatretus_burgeri
ENSMUSG00000026058	Khdrbs2	99	48.547	ENSEBUG00000007596	khdrbs2	88	50.725	Eptatretus_burgeri
ENSMUSG00000026058	Khdrbs2	100	95.415	ENSEASG00005003578	KHDRBS2	100	95.415	Equus_asinus_asinus
ENSMUSG00000026058	Khdrbs2	100	95.129	ENSECAG00000021541	KHDRBS2	100	95.129	Equus_caballus
ENSMUSG00000026058	Khdrbs2	91	93.375	ENSEEUG00000003986	KHDRBS2	100	93.375	Erinaceus_europaeus
ENSMUSG00000026058	Khdrbs2	100	71.510	ENSELUG00000020898	khdrbs2	100	69.143	Esox_lucius
ENSMUSG00000026058	Khdrbs2	100	95.702	ENSFCAG00000046207	KHDRBS2	78	95.702	Felis_catus
ENSMUSG00000026058	Khdrbs2	91	89.342	ENSFALG00000001691	KHDRBS2	99	89.655	Ficedula_albicollis
ENSMUSG00000026058	Khdrbs2	91	84.906	ENSFDAG00000008941	KHDRBS2	100	85.849	Fukomys_damarensis
ENSMUSG00000026058	Khdrbs2	81	49.655	ENSFHEG00000021135	khdrbs2	89	49.310	Fundulus_heteroclitus
ENSMUSG00000026058	Khdrbs2	100	62.040	ENSGMOG00000005065	khdrbs2	100	61.756	Gadus_morhua
ENSMUSG00000026058	Khdrbs2	100	89.685	ENSGALG00000016276	KHDRBS2	100	88.825	Gallus_gallus
ENSMUSG00000026058	Khdrbs2	100	68.750	ENSGAFG00000007645	khdrbs2	100	67.330	Gambusia_affinis
ENSMUSG00000026058	Khdrbs2	100	67.139	ENSGACG00000006097	khdrbs2	100	66.477	Gasterosteus_aculeatus
ENSMUSG00000026058	Khdrbs2	64	84.685	ENSGAGG00000023457	-	78	83.333	Gopherus_agassizii
ENSMUSG00000026058	Khdrbs2	100	95.415	ENSGGOG00000025068	KHDRBS2	100	95.415	Gorilla_gorilla
ENSMUSG00000026058	Khdrbs2	100	69.122	ENSHBUG00000008029	khdrbs2	100	68.555	Haplochromis_burtoni
ENSMUSG00000026058	Khdrbs2	100	92.264	ENSHGLG00000017439	KHDRBS2	100	92.264	Heterocephalus_glaber_female
ENSMUSG00000026058	Khdrbs2	100	92.264	ENSHGLG00100003817	KHDRBS2	100	92.264	Heterocephalus_glaber_male
ENSMUSG00000026058	Khdrbs2	100	63.739	ENSHCOG00000013857	khdrbs2	100	63.456	Hippocampus_comes
ENSMUSG00000026058	Khdrbs2	100	75.714	ENSIPUG00000015437	khdrbs2	100	76.286	Ictalurus_punctatus
ENSMUSG00000026058	Khdrbs2	100	95.989	ENSSTOG00000011529	KHDRBS2	100	95.989	Ictidomys_tridecemlineatus
ENSMUSG00000026058	Khdrbs2	100	94.556	ENSJJAG00000017812	Khdrbs2	100	94.556	Jaculus_jaculus
ENSMUSG00000026058	Khdrbs2	100	69.688	ENSKMAG00000018214	khdrbs2	100	68.750	Kryptolebias_marmoratus
ENSMUSG00000026058	Khdrbs2	99	66.762	ENSLBEG00000013077	khdrbs2	86	67.143	Labrus_bergylta
ENSMUSG00000026058	Khdrbs2	100	78.571	ENSLOCG00000017016	khdrbs2	98	78.571	Lepisosteus_oculatus
ENSMUSG00000026058	Khdrbs2	100	95.702	ENSLAFG00000006655	KHDRBS2	100	95.702	Loxodonta_africana
ENSMUSG00000026058	Khdrbs2	100	95.989	ENSMFAG00000002823	KHDRBS2	100	95.989	Macaca_fascicularis
ENSMUSG00000026058	Khdrbs2	100	95.989	ENSMNEG00000042875	KHDRBS2	100	95.989	Macaca_nemestrina
ENSMUSG00000026058	Khdrbs2	77	95.926	ENSMLEG00000022013	KHDRBS2	100	95.926	Mandrillus_leucophaeus
ENSMUSG00000026058	Khdrbs2	100	67.236	ENSMAMG00000015552	khdrbs2	100	67.806	Mastacembelus_armatus
ENSMUSG00000026058	Khdrbs2	100	68.555	ENSMZEG00005005504	khdrbs2	100	67.989	Maylandia_zebra
ENSMUSG00000026058	Khdrbs2	56	97.462	ENSMAUG00000013631	Khdrbs2	72	97.462	Mesocricetus_auratus
ENSMUSG00000026058	Khdrbs2	100	95.415	ENSMICG00000010315	KHDRBS2	100	95.415	Microcebus_murinus
ENSMUSG00000026058	Khdrbs2	100	97.421	ENSMOCG00000012101	Khdrbs2	100	97.421	Microtus_ochrogaster
ENSMUSG00000026058	Khdrbs2	100	66.761	ENSMMOG00000007708	khdrbs2	100	65.909	Mola_mola
ENSMUSG00000026058	Khdrbs2	100	92.264	ENSMODG00000018714	KHDRBS2	100	92.264	Monodelphis_domestica
ENSMUSG00000026058	Khdrbs2	100	65.909	ENSMALG00000002214	khdrbs2	100	65.625	Monopterus_albus
ENSMUSG00000026058	Khdrbs2	100	99.427	MGP_CAROLIEiJ_G0014010	Khdrbs2	100	99.427	Mus_caroli
ENSMUSG00000026058	Khdrbs2	100	99.713	MGP_PahariEiJ_G0027259	Khdrbs2	100	99.713	Mus_pahari
ENSMUSG00000026058	Khdrbs2	100	100.000	MGP_SPRETEiJ_G0014814	Khdrbs2	100	100.000	Mus_spretus
ENSMUSG00000026058	Khdrbs2	100	95.415	ENSMPUG00000002607	KHDRBS2	100	95.415	Mustela_putorius_furo
ENSMUSG00000026058	Khdrbs2	100	94.842	ENSMLUG00000005484	KHDRBS2	100	94.842	Myotis_lucifugus
ENSMUSG00000026058	Khdrbs2	100	69.122	ENSNBRG00000013759	khdrbs2	100	68.555	Neolamprologus_brichardi
ENSMUSG00000026058	Khdrbs2	91	92.453	ENSODEG00000015927	KHDRBS2	100	92.453	Octodon_degus
ENSMUSG00000026058	Khdrbs2	100	69.492	ENSONIG00000009755	khdrbs2	100	68.555	Oreochromis_niloticus
ENSMUSG00000026058	Khdrbs2	100	95.129	ENSOCUG00000012344	KHDRBS2	100	95.129	Oryctolagus_cuniculus
ENSMUSG00000026058	Khdrbs2	100	67.898	ENSORLG00000010165	khdrbs2	100	67.330	Oryzias_latipes
ENSMUSG00000026058	Khdrbs2	100	67.614	ENSORLG00020020168	khdrbs2	100	67.045	Oryzias_latipes_hni
ENSMUSG00000026058	Khdrbs2	100	67.614	ENSORLG00015003971	khdrbs2	100	67.045	Oryzias_latipes_hsok
ENSMUSG00000026058	Khdrbs2	100	67.330	ENSOMEG00000001684	khdrbs2	100	66.382	Oryzias_melastigma
ENSMUSG00000026058	Khdrbs2	100	95.415	ENSOGAG00000015071	KHDRBS2	100	95.415	Otolemur_garnettii
ENSMUSG00000026058	Khdrbs2	95	88.757	ENSOARG00000005603	KHDRBS2	97	88.757	Ovis_aries
ENSMUSG00000026058	Khdrbs2	100	95.129	ENSPPAG00000032651	KHDRBS2	100	95.129	Pan_paniscus
ENSMUSG00000026058	Khdrbs2	100	95.989	ENSPPRG00000008147	KHDRBS2	100	95.989	Panthera_pardus
ENSMUSG00000026058	Khdrbs2	100	95.989	ENSPTIG00000020547	KHDRBS2	100	95.989	Panthera_tigris_altaica
ENSMUSG00000026058	Khdrbs2	100	95.415	ENSPTRG00000018311	KHDRBS2	100	95.415	Pan_troglodytes
ENSMUSG00000026058	Khdrbs2	100	95.989	ENSPANG00000021881	KHDRBS2	100	95.989	Papio_anubis
ENSMUSG00000026058	Khdrbs2	59	96.491	ENSPSIG00000015682	-	81	96.491	Pelodiscus_sinensis
ENSMUSG00000026058	Khdrbs2	100	67.806	ENSPMGG00000008580	khdrbs2	100	65.812	Periophthalmus_magnuspinnatus
ENSMUSG00000026058	Khdrbs2	100	68.839	ENSPFOG00000011638	khdrbs2	100	67.898	Poecilia_formosa
ENSMUSG00000026058	Khdrbs2	100	67.898	ENSPLAG00000023478	khdrbs2	100	66.761	Poecilia_latipinna
ENSMUSG00000026058	Khdrbs2	100	68.466	ENSPMEG00000011563	khdrbs2	100	67.330	Poecilia_mexicana
ENSMUSG00000026058	Khdrbs2	100	68.839	ENSPREG00000022525	khdrbs2	100	67.898	Poecilia_reticulata
ENSMUSG00000026058	Khdrbs2	58	98.214	ENSPPYG00000029598	-	97	98.039	Pongo_abelii
ENSMUSG00000026058	Khdrbs2	100	82.521	ENSPCAG00000001426	KHDRBS2	100	82.521	Procavia_capensis
ENSMUSG00000026058	Khdrbs2	100	82.521	ENSPCOG00000018881	KHDRBS2	100	82.521	Propithecus_coquereli
ENSMUSG00000026058	Khdrbs2	100	69.122	ENSPNYG00000019550	khdrbs2	100	68.555	Pundamilia_nyererei
ENSMUSG00000026058	Khdrbs2	99	76.149	ENSPNAG00000008598	khdrbs2	99	76.149	Pygocentrus_nattereri
ENSMUSG00000026058	Khdrbs2	100	98.281	ENSRNOG00000012284	Khdrbs2	100	98.281	Rattus_norvegicus
ENSMUSG00000026058	Khdrbs2	91	95.253	ENSRBIG00000039774	KHDRBS2	99	95.253	Rhinopithecus_bieti
ENSMUSG00000026058	Khdrbs2	100	95.702	ENSSBOG00000019779	KHDRBS2	100	95.702	Saimiri_boliviensis_boliviensis
ENSMUSG00000026058	Khdrbs2	100	76.286	ENSSFOG00015012491	khdrbs2	100	75.429	Scleropages_formosus
ENSMUSG00000026058	Khdrbs2	99	66.856	ENSSMAG00000006422	khdrbs2	89	66.572	Scophthalmus_maximus
ENSMUSG00000026058	Khdrbs2	100	69.801	ENSSDUG00000023520	khdrbs2	100	69.231	Seriola_dumerili
ENSMUSG00000026058	Khdrbs2	99	69.143	ENSSLDG00000019363	khdrbs2	98	68.571	Seriola_lalandi_dorsalis
ENSMUSG00000026058	Khdrbs2	100	73.639	ENSSARG00000004121	KHDRBS2	100	73.639	Sorex_araneus
ENSMUSG00000026058	Khdrbs2	70	90.535	ENSSPUG00000006155	KHDRBS2	77	89.300	Sphenodon_punctatus
ENSMUSG00000026058	Khdrbs2	100	94.842	ENSSSCG00000001490	KHDRBS2	100	94.842	Sus_scrofa
ENSMUSG00000026058	Khdrbs2	69	89.583	ENSTGUG00000012786	KHDRBS2	99	88.333	Taeniopygia_guttata
ENSMUSG00000026058	Khdrbs2	100	64.305	ENSTRUG00000015760	khdrbs2	100	65.266	Takifugu_rubripes
ENSMUSG00000026058	Khdrbs2	58	83.036	ENSTNIG00000016577	khdrbs2	100	83.036	Tetraodon_nigroviridis
ENSMUSG00000026058	Khdrbs2	100	93.410	ENSTTRG00000005591	KHDRBS2	100	93.410	Tursiops_truncatus
ENSMUSG00000026058	Khdrbs2	100	95.415	ENSUMAG00000018593	KHDRBS2	100	95.415	Ursus_maritimus
ENSMUSG00000026058	Khdrbs2	91	92.744	ENSVPAG00000001469	KHDRBS2	100	92.744	Vicugna_pacos
ENSMUSG00000026058	Khdrbs2	100	94.842	ENSVVUG00000008652	KHDRBS2	100	94.842	Vulpes_vulpes
ENSMUSG00000026058	Khdrbs2	100	75.072	ENSXETG00000004451	khdrbs2	100	71.920	Xenopus_tropicalis
ENSMUSG00000026058	Khdrbs2	100	68.750	ENSXMAG00000009415	khdrbs2	100	67.045	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005070	SH3/SH2 adaptor activity	10077576.	TAS	Function
GO:0005515	protein binding	10077576.	IPI	Function
GO:0005634	nucleus	10077576.	TAS	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008143	poly(A) binding	10077576.	IDA	Function
GO:0008266	poly(U) RNA binding	10077576.	IDA	Function
GO:0017124	SH3 domain binding	10077576.	IDA	Function
GO:0042169	SH2 domain binding	10077576.	IDA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0046982	protein heterodimerization activity	10077576.	IDA	Function
GO:0048024	regulation of mRNA splicing, via spliceosome	22196734.	IDA	Process