EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026083 (Gene tree)
Gene ID: 226982
Gene Symbol: Eif5b
Alias: A030003E17Rik|IF2
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 57570 bases
Position: chr1:37998010-38055579
Accession: 2441772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000027252	IF-2	PF11987.8	7.5e-19	1	1
ENSMUSP00000027252	GTP_EFTU	PF00009.27	8.1e-34	1	1
ENSMUSP00000027252	MMR_HSR1	PF01926.23	8.8e-07	1	1
ENSMUSP00000027252	GTP_EFTU_D2	PF03144.25	3.2e-13	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000195664	-	690	-	-	- (aa)	-	-
ENSMUST00000193151	-	578	-	-	- (aa)	-	-
ENSMUST00000193806	-	479	-	-	- (aa)	-	-
ENSMUST00000192548	-	5788	-	-	- (aa)	-	-
ENSMUST00000027252	-	7797	-	ENSMUSP00000027252	1216 (aa)	-	Q05D44

Gene Model

Click here to download ENSMUSG00000026083's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026083's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026083	Eif5b	100	90.016	ENSG00000158417	EIF5B	100	90.180	Homo_sapiens
ENSMUSG00000026083	Eif5b	100	89.935	ENSAMEG00000013269	EIF5B	100	90.180	Ailuropoda_melanoleuca
ENSMUSG00000026083	Eif5b	99	81.245	ENSAPLG00000015401	EIF5B	100	81.311	Anas_platyrhynchos
ENSMUSG00000026083	Eif5b	100	90.663	ENSANAG00000017300	EIF5B	100	90.909	Aotus_nancymaae
ENSMUSG00000026083	Eif5b	100	88.288	ENSBTAG00000034255	EIF5B	99	89.182	Bos_taurus
ENSMUSG00000026083	Eif5b	100	90.336	ENSCAFG00000002278	EIF5B	100	90.581	Canis_familiaris
ENSMUSG00000026083	Eif5b	98	89.782	ENSCAFG00020024623	EIF5B	94	94.946	Canis_lupus_dingo
ENSMUSG00000026083	Eif5b	100	89.189	ENSCHIG00000027106	EIF5B	100	89.681	Capra_hircus
ENSMUSG00000026083	Eif5b	99	90.405	ENSTSYG00000011850	EIF5B	100	90.653	Carlito_syrichta
ENSMUSG00000026083	Eif5b	99	90.033	ENSCCAG00000027156	EIF5B	99	90.280	Cebus_capucinus
ENSMUSG00000026083	Eif5b	100	90.106	ENSCATG00000038292	EIF5B	100	90.106	Cercocebus_atys
ENSMUSG00000026083	Eif5b	100	88.616	ENSCLAG00000007674	EIF5B	100	88.452	Chinchilla_lanigera
ENSMUSG00000026083	Eif5b	100	89.951	ENSCSAG00000017209	EIF5B	100	90.114	Chlorocebus_sabaeus
ENSMUSG00000026083	Eif5b	100	81.759	ENSCPBG00000005318	EIF5B	100	80.228	Chrysemys_picta_bellii
ENSMUSG00000026083	Eif5b	100	89.779	ENSCANG00000042984	EIF5B	100	89.289	Colobus_angolensis_palliatus
ENSMUSG00000026083	Eif5b	100	92.617	ENSCGRG00001010937	Eif5b	100	92.535	Cricetulus_griseus_chok1gshd
ENSMUSG00000026083	Eif5b	99	92.620	ENSCGRG00000003140	Eif5b	100	92.869	Cricetulus_griseus_crigri
ENSMUSG00000026083	Eif5b	94	89.267	ENSDNOG00000005016	EIF5B	99	89.529	Dasypus_novemcinctus
ENSMUSG00000026083	Eif5b	100	85.316	ENSETEG00000001467	EIF5B	100	85.070	Echinops_telfairi
ENSMUSG00000026083	Eif5b	100	89.926	ENSEASG00005018269	EIF5B	100	90.745	Equus_asinus_asinus
ENSMUSG00000026083	Eif5b	100	90.745	ENSECAG00000000102	EIF5B	100	90.991	Equus_caballus
ENSMUSG00000026083	Eif5b	99	89.227	ENSFCAG00000009782	EIF5B	100	89.474	Felis_catus
ENSMUSG00000026083	Eif5b	100	89.344	ENSFDAG00000008737	EIF5B	100	90.082	Fukomys_damarensis
ENSMUSG00000026083	Eif5b	100	81.057	ENSGALG00000016764	EIF5B	100	80.650	Gallus_gallus
ENSMUSG00000026083	Eif5b	100	89.935	ENSGGOG00000001721	EIF5B	100	90.098	Gorilla_gorilla
ENSMUSG00000026083	Eif5b	100	90.230	ENSHGLG00000016367	EIF5B	100	90.394	Heterocephalus_glaber_female
ENSMUSG00000026083	Eif5b	100	90.148	ENSHGLG00100016185	EIF5B	100	90.312	Heterocephalus_glaber_male
ENSMUSG00000026083	Eif5b	100	90.827	ENSSTOG00000014283	EIF5B	100	90.991	Ictidomys_tridecemlineatus
ENSMUSG00000026083	Eif5b	73	75.930	ENSLOCG00000001405	EIF5B	51	86.817	Lepisosteus_oculatus
ENSMUSG00000026083	Eif5b	100	89.435	ENSLAFG00000006209	EIF5B	100	88.943	Loxodonta_africana
ENSMUSG00000026083	Eif5b	100	90.188	ENSMFAG00000038108	EIF5B	100	90.188	Macaca_fascicularis
ENSMUSG00000026083	Eif5b	100	90.106	ENSMMUG00000018946	EIF5B	100	90.106	Macaca_mulatta
ENSMUSG00000026083	Eif5b	100	90.188	ENSMNEG00000040038	EIF5B	100	90.188	Macaca_nemestrina
ENSMUSG00000026083	Eif5b	99	90.099	ENSMLEG00000031596	EIF5B	100	90.099	Mandrillus_leucophaeus
ENSMUSG00000026083	Eif5b	99	80.697	ENSMGAG00000014793	EIF5B	100	80.049	Meleagris_gallopavo
ENSMUSG00000026083	Eif5b	99	90.744	ENSMICG00000015960	EIF5B	99	91.067	Microcebus_murinus
ENSMUSG00000026083	Eif5b	100	99.342	MGP_CAROLIEiJ_G0014061	Eif5b	100	99.342	Mus_caroli
ENSMUSG00000026083	Eif5b	100	98.520	MGP_PahariEiJ_G0027308	Eif5b	100	98.520	Mus_pahari
ENSMUSG00000026083	Eif5b	100	99.918	MGP_SPRETEiJ_G0014865	Eif5b	100	99.918	Mus_spretus
ENSMUSG00000026083	Eif5b	100	90.172	ENSMPUG00000012068	EIF5B	100	90.500	Mustela_putorius_furo
ENSMUSG00000026083	Eif5b	99	89.595	ENSMLUG00000008119	EIF5B	100	89.421	Myotis_lucifugus
ENSMUSG00000026083	Eif5b	100	89.935	ENSNLEG00000014172	EIF5B	100	90.098	Nomascus_leucogenys
ENSMUSG00000026083	Eif5b	93	87.006	ENSOPRG00000007359	EIF5B	93	86.467	Ochotona_princeps
ENSMUSG00000026083	Eif5b	99	90.484	ENSOGAG00000013238	EIF5B	99	90.504	Otolemur_garnettii
ENSMUSG00000026083	Eif5b	100	89.517	ENSOARG00000013400	EIF5B	100	90.008	Ovis_aries
ENSMUSG00000026083	Eif5b	99	87.871	ENSPPAG00000029857	EIF5B	100	87.871	Pan_paniscus
ENSMUSG00000026083	Eif5b	99	90.000	ENSPPRG00000010820	EIF5B	99	90.248	Panthera_pardus
ENSMUSG00000026083	Eif5b	99	87.839	ENSPTIG00000021215	EIF5B	99	88.085	Panthera_tigris_altaica
ENSMUSG00000026083	Eif5b	100	90.098	ENSPTRG00000012279	EIF5B	100	90.262	Pan_troglodytes
ENSMUSG00000026083	Eif5b	100	90.433	ENSPANG00000021269	EIF5B	100	90.515	Papio_anubis
ENSMUSG00000026083	Eif5b	99	83.663	ENSPCIG00000011603	EIF5B	99	82.989	Phascolarctos_cinereus
ENSMUSG00000026083	Eif5b	83	87.280	ENSPPYG00000012094	EIF5B	100	87.476	Pongo_abelii
ENSMUSG00000026083	Eif5b	99	97.012	ENSRNOG00000023356	Eif5b	100	97.012	Rattus_norvegicus
ENSMUSG00000026083	Eif5b	100	96.793	ENSRNOG00000046621	AABR07043748.1	100	96.793	Rattus_norvegicus
ENSMUSG00000026083	Eif5b	99	87.997	ENSRBIG00000028180	EIF5B	99	87.201	Rhinopithecus_bieti
ENSMUSG00000026083	Eif5b	100	89.943	ENSRROG00000038801	EIF5B	100	89.943	Rhinopithecus_roxellana
ENSMUSG00000026083	Eif5b	100	90.098	ENSSBOG00000033578	EIF5B	100	90.182	Saimiri_boliviensis_boliviensis
ENSMUSG00000026083	Eif5b	100	84.735	ENSSHAG00000010146	EIF5B	100	84.722	Sarcophilus_harrisii
ENSMUSG00000026083	Eif5b	99	89.356	ENSSARG00000002096	EIF5B	100	89.356	Sorex_araneus
ENSMUSG00000026083	Eif5b	99	79.572	ENSSPUG00000009445	EIF5B	99	79.242	Sphenodon_punctatus
ENSMUSG00000026083	Eif5b	100	89.844	ENSSSCG00000008180	EIF5B	100	89.926	Sus_scrofa
ENSMUSG00000026083	Eif5b	100	79.140	ENSTGUG00000010099	EIF5B	100	78.896	Taeniopygia_guttata
ENSMUSG00000026083	Eif5b	100	86.989	ENSTTRG00000010374	EIF5B	100	87.234	Tursiops_truncatus
ENSMUSG00000026083	Eif5b	99	90.165	ENSUMAG00000008519	EIF5B	98	97.703	Ursus_maritimus
ENSMUSG00000026083	Eif5b	88	87.896	ENSVPAG00000007725	EIF5B	100	88.454	Vicugna_pacos
ENSMUSG00000026083	Eif5b	100	90.336	ENSVVUG00000028702	EIF5B	100	90.581	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003743	translation initiation factor activity	21873635.	IBA	Function
GO:0003743	translation initiation factor activity	-	ISO	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0006446	regulation of translational initiation	-	ISO	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function