EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026087 (Gene tree)
Gene ID: 107734
Gene Symbol: Mrpl30
Alias: 2310001L22Rik|MRP-L28|Rpml28
Full Name: mitochondrial ribosomal protein L30
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 8059 bases
Position: chr1:37890477-37898535
Accession: 1333820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000142168	Ribosomal_L30	PF00327.20	1.6e-14	1	1
ENSMUSP00000027256	Ribosomal_L30	PF00327.20	2.5e-14	1	1
ENSMUSP00000141654	Ribosomal_L30	PF00327.20	2.5e-14	1	1
ENSMUSP00000141693	Ribosomal_L30	PF00327.20	2.5e-14	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000194857	-	501	-	ENSMUSP00000142168	128 (aa)	-	A0A0A6YXW4
ENSMUST00000161694	-	356	-	-	- (aa)	-	-
ENSMUST00000160082	-	1757	-	ENSMUSP00000141883	6 (aa)	-	UPI00053BD8EC
ENSMUST00000162513	-	644	-	-	- (aa)	-	-
ENSMUST00000027256	-	969	XM_011238417	ENSMUSP00000027256	160 (aa)	XP_011236719	Q9D7N6
ENSMUST00000195373	-	587	-	ENSMUSP00000141693	160 (aa)	-	Q9D7N6
ENSMUST00000193673	-	662	XM_006495612	ENSMUSP00000141654	160 (aa)	XP_006495675	Q9D7N6

Gene Model

Click here to download ENSMUSG00000026087's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026087's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026087	Mrpl30	100	82.812	ENSG00000185414	MRPL30	98	83.544	Homo_sapiens
ENSMUSG00000026087	Mrpl30	100	85.938	ENSAMEG00000013344	-	86	83.544	Ailuropoda_melanoleuca
ENSMUSG00000026087	Mrpl30	99	84.177	ENSANAG00000028266	-	98	84.177	Aotus_nancymaae
ENSMUSG00000026087	Mrpl30	91	55.932	ENSBTAG00000050222	-	92	52.667	Bos_taurus
ENSMUSG00000026087	Mrpl30	100	82.031	ENSBTAG00000038949	MRPL30	99	80.503	Bos_taurus
ENSMUSG00000026087	Mrpl30	100	85.156	ENSCJAG00000007085	-	98	86.076	Callithrix_jacchus
ENSMUSG00000026087	Mrpl30	100	84.375	ENSCAFG00000031628	-	98	83.544	Canis_familiaris
ENSMUSG00000026087	Mrpl30	100	84.375	ENSCAFG00020024965	-	98	83.544	Canis_lupus_dingo
ENSMUSG00000026087	Mrpl30	100	82.812	ENSCHIG00000024135	-	99	81.761	Capra_hircus
ENSMUSG00000026087	Mrpl30	99	68.987	ENSTSYG00000037066	-	98	68.987	Carlito_syrichta
ENSMUSG00000026087	Mrpl30	99	83.544	ENSTSYG00000026939	-	98	83.544	Carlito_syrichta
ENSMUSG00000026087	Mrpl30	100	82.946	ENSCPOG00000010716	-	100	83.226	Cavia_porcellus
ENSMUSG00000026087	Mrpl30	100	77.344	ENSCCAG00000017186	-	98	77.987	Cebus_capucinus
ENSMUSG00000026087	Mrpl30	99	83.544	ENSCCAG00000034467	-	98	83.544	Cebus_capucinus
ENSMUSG00000026087	Mrpl30	100	85.156	ENSCATG00000041078	-	98	86.076	Cercocebus_atys
ENSMUSG00000026087	Mrpl30	100	85.938	ENSCLAG00000005684	-	87	85.806	Chinchilla_lanigera
ENSMUSG00000026087	Mrpl30	100	84.375	ENSCSAG00000017218	-	98	84.177	Chlorocebus_sabaeus
ENSMUSG00000026087	Mrpl30	100	78.125	ENSCHOG00000005804	-	93	78.481	Choloepus_hoffmanni
ENSMUSG00000026087	Mrpl30	100	83.594	ENSCANG00000043682	-	98	84.177	Colobus_angolensis_palliatus
ENSMUSG00000026087	Mrpl30	100	91.250	ENSCGRG00001006119	Mrpl30	100	91.250	Cricetulus_griseus_chok1gshd
ENSMUSG00000026087	Mrpl30	100	91.250	ENSCGRG00000001910	Mrpl30	100	91.250	Cricetulus_griseus_crigri
ENSMUSG00000026087	Mrpl30	100	78.125	ENSDNOG00000018648	-	98	79.114	Dasypus_novemcinctus
ENSMUSG00000026087	Mrpl30	99	77.215	ENSDNOG00000044391	-	98	77.215	Dasypus_novemcinctus
ENSMUSG00000026087	Mrpl30	100	73.438	ENSDNOG00000042586	-	97	71.795	Dasypus_novemcinctus
ENSMUSG00000026087	Mrpl30	100	76.562	ENSDNOG00000032825	-	98	73.418	Dasypus_novemcinctus
ENSMUSG00000026087	Mrpl30	100	84.375	ENSDORG00000010734	Mrpl30	100	84.375	Dipodomys_ordii
ENSMUSG00000026087	Mrpl30	100	85.156	ENSETEG00000005006	-	93	84.810	Echinops_telfairi
ENSMUSG00000026087	Mrpl30	100	83.594	ENSEASG00005021843	-	61	82.803	Equus_asinus_asinus
ENSMUSG00000026087	Mrpl30	100	83.594	ENSECAG00000015993	-	61	82.803	Equus_caballus
ENSMUSG00000026087	Mrpl30	100	85.156	ENSFCAG00000024233	-	66	83.750	Felis_catus
ENSMUSG00000026087	Mrpl30	100	82.812	ENSFDAG00000009803	-	87	82.581	Fukomys_damarensis
ENSMUSG00000026087	Mrpl30	99	83.544	ENSGGOG00000041571	-	98	83.544	Gorilla_gorilla
ENSMUSG00000026087	Mrpl30	100	84.375	ENSHGLG00000006467	-	100	84.416	Heterocephalus_glaber_female
ENSMUSG00000026087	Mrpl30	100	84.375	ENSHGLG00100016969	-	100	84.416	Heterocephalus_glaber_male
ENSMUSG00000026087	Mrpl30	100	83.125	ENSJJAG00000006196	Mrpl30	99	83.125	Jaculus_jaculus
ENSMUSG00000026087	Mrpl30	100	85.156	ENSLAFG00000008151	-	87	81.761	Loxodonta_africana
ENSMUSG00000026087	Mrpl30	100	84.375	ENSMFAG00000001729	MRPL30	98	84.810	Macaca_fascicularis
ENSMUSG00000026087	Mrpl30	100	84.375	ENSMMUG00000038088	-	98	84.810	Macaca_mulatta
ENSMUSG00000026087	Mrpl30	99	69.620	ENSMNEG00000034146	-	98	69.620	Macaca_nemestrina
ENSMUSG00000026087	Mrpl30	100	85.156	ENSMLEG00000027758	-	98	85.443	Mandrillus_leucophaeus
ENSMUSG00000026087	Mrpl30	95	71.711	ENSMAUG00000014813	-	94	71.711	Mesocricetus_auratus
ENSMUSG00000026087	Mrpl30	100	91.406	ENSMAUG00000021333	-	93	89.375	Mesocricetus_auratus
ENSMUSG00000026087	Mrpl30	100	91.875	ENSMAUG00000017646	-	93	91.875	Mesocricetus_auratus
ENSMUSG00000026087	Mrpl30	100	85.938	ENSMICG00000011627	-	98	86.076	Microcebus_murinus
ENSMUSG00000026087	Mrpl30	100	92.500	ENSMOCG00000005615	Mrpl30	100	92.500	Microtus_ochrogaster
ENSMUSG00000026087	Mrpl30	100	98.125	MGP_CAROLIEiJ_G0014057	Mrpl30	100	98.125	Mus_caroli
ENSMUSG00000026087	Mrpl30	100	97.656	MGP_PahariEiJ_G0027303	Mrpl30	100	97.656	Mus_pahari
ENSMUSG00000026087	Mrpl30	100	98.750	MGP_SPRETEiJ_G0014861	Mrpl30	100	98.750	Mus_spretus
ENSMUSG00000026087	Mrpl30	100	83.594	ENSMPUG00000011085	-	98	81.646	Mustela_putorius_furo
ENSMUSG00000026087	Mrpl30	100	82.031	ENSMLUG00000029851	-	98	80.380	Myotis_lucifugus
ENSMUSG00000026087	Mrpl30	100	84.375	ENSNGAG00000020323	Mrpl30	97	88.194	Nannospalax_galili
ENSMUSG00000026087	Mrpl30	99	84.810	ENSNLEG00000027490	-	98	84.810	Nomascus_leucogenys
ENSMUSG00000026087	Mrpl30	100	84.375	ENSOPRG00000007331	-	96	82.500	Ochotona_princeps
ENSMUSG00000026087	Mrpl30	100	82.812	ENSODEG00000006001	-	96	81.410	Octodon_degus
ENSMUSG00000026087	Mrpl30	100	82.031	ENSODEG00000019187	-	87	81.290	Octodon_degus
ENSMUSG00000026087	Mrpl30	100	77.344	ENSODEG00000018681	-	87	76.129	Octodon_degus
ENSMUSG00000026087	Mrpl30	100	81.250	ENSODEG00000009949	-	96	81.290	Octodon_degus
ENSMUSG00000026087	Mrpl30	99	84.810	ENSOCUG00000004111	-	98	84.810	Oryctolagus_cuniculus
ENSMUSG00000026087	Mrpl30	98	73.885	ENSOGAG00000030016	-	97	73.885	Otolemur_garnettii
ENSMUSG00000026087	Mrpl30	99	77.953	ENSOGAG00000025954	-	99	75.472	Otolemur_garnettii
ENSMUSG00000026087	Mrpl30	100	82.812	ENSOGAG00000002241	-	94	82.166	Otolemur_garnettii
ENSMUSG00000026087	Mrpl30	100	82.812	ENSOARG00000013442	-	99	81.761	Ovis_aries
ENSMUSG00000026087	Mrpl30	99	83.544	ENSPPAG00000038932	-	98	83.544	Pan_paniscus
ENSMUSG00000026087	Mrpl30	100	85.156	ENSPPRG00000008888	-	98	84.177	Panthera_pardus
ENSMUSG00000026087	Mrpl30	100	85.156	ENSPTIG00000004998	-	98	84.177	Panthera_tigris_altaica
ENSMUSG00000026087	Mrpl30	99	83.544	ENSPTRG00000012275	-	98	83.544	Pan_troglodytes
ENSMUSG00000026087	Mrpl30	100	85.156	ENSPANG00000033489	-	98	85.443	Papio_anubis
ENSMUSG00000026087	Mrpl30	100	92.500	ENSPEMG00000018330	-	100	92.500	Peromyscus_maniculatus_bairdii
ENSMUSG00000026087	Mrpl30	100	81.875	ENSPEMG00000007715	-	100	81.875	Peromyscus_maniculatus_bairdii
ENSMUSG00000026087	Mrpl30	99	84.177	ENSPPYG00000019961	-	98	84.177	Pongo_abelii
ENSMUSG00000026087	Mrpl30	100	82.031	ENSPCOG00000000860	-	98	81.013	Propithecus_coquereli
ENSMUSG00000026087	Mrpl30	100	87.500	ENSPCOG00000013471	-	98	86.709	Propithecus_coquereli
ENSMUSG00000026087	Mrpl30	100	83.594	ENSPVAG00000006587	-	92	81.013	Pteropus_vampyrus
ENSMUSG00000026087	Mrpl30	100	96.875	ENSRNOG00000049330	Mrpl30	100	96.875	Rattus_norvegicus
ENSMUSG00000026087	Mrpl30	99	77.215	ENSRBIG00000041744	-	98	77.215	Rhinopithecus_bieti
ENSMUSG00000026087	Mrpl30	99	84.810	ENSRROG00000044692	-	98	84.810	Rhinopithecus_roxellana
ENSMUSG00000026087	Mrpl30	100	85.156	ENSSBOG00000036412	-	98	86.076	Saimiri_boliviensis_boliviensis
ENSMUSG00000026087	Mrpl30	87	56.835	ENSSPUG00000000679	-	66	56.835	Sphenodon_punctatus
ENSMUSG00000026087	Mrpl30	100	85.938	ENSSSCG00000008183	-	99	82.390	Sus_scrofa
ENSMUSG00000026087	Mrpl30	100	85.156	ENSTTRG00000004937	-	91	82.278	Tursiops_truncatus
ENSMUSG00000026087	Mrpl30	100	83.594	ENSUAMG00000015567	-	98	82.278	Ursus_americanus
ENSMUSG00000026087	Mrpl30	100	84.375	ENSUMAG00000008932	-	87	82.278	Ursus_maritimus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005761	mitochondrial ribosome	9857009.	ISS	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0008150	biological_process	-	ND	Process
GO:0015934	large ribosomal subunit	-	IEA	Component