EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026131 (Gene tree)
Gene ID: 13518
Gene Symbol: Dst
Alias: 2310001O04Rik|A830042E19Rik|BPAG1|BPAG1-n|Bpag|Macf2|ah|athetoid|bullous pemphigoid antigen 1|nmf203|nmf339
Full Name: dystonin
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 400437
Position: chr1: 33908225-34308661
Accession: 104627
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000183034	-	23201	XM_006495666	ENSMUSP00000138308	7717 (aa)	XP_006495729	S4R1P5
ENSMUST00000182335	-	3478	-	-	- (aa)	-	-
ENSMUST00000182018	-	5729	-	ENSMUSP00000138426	1638 (aa)	-	S4R1Y6
ENSMUST00000194192	-	6039	-	ENSMUSP00000148563	1674 (aa)	-	A0A1D5RLZ3
ENSMUST00000182314	-	2643	-	ENSMUSP00000142098	282 (aa)	-	A0A0A6YXR1
ENSMUST00000183006	-	1221	-	-	- (aa)	-	-
ENSMUST00000183302	-	8788	XM_006495686	ENSMUSP00000138376	2639 (aa)	XP_006495749	Q91ZU6
ENSMUST00000185897	-	8961	-	ENSMUSP00000139888	2987 (aa)	-	A0A087WPR7
ENSMUST00000182697	-	2704	-	ENSMUSP00000141811	274 (aa)	-	A0A0A6YX28
ENSMUST00000097785	-	23251	XM_006495669	ENSMUSP00000095392	7393 (aa)	XP_006495732	Q91ZU6
ENSMUST00000097786	-	17212	XM_006495684	ENSMUSP00000095393	5379 (aa)	XP_006495747	Q91ZU6
ENSMUST00000115104	-	23279	-	ENSMUSP00000110756	7406 (aa)	-	E9Q9X1
ENSMUST00000182507	-	776	-	ENSMUSP00000138591	259 (aa)	-	S4R2C6
ENSMUST00000183331	-	2728	-	-	- (aa)	-	-
ENSMUST00000185736	-	1394	-	-	- (aa)	-	-
ENSMUST00000187486	-	4539	-	ENSMUSP00000140560	1471 (aa)	-	A0A087WRB8
ENSMUST00000183100	-	786	-	ENSMUSP00000138570	262 (aa)	-	S4R2A8
ENSMUST00000182410	-	2027	-	-	- (aa)	-	-
ENSMUST00000185269	-	16340	XM_006495680	ENSMUSP00000141127	5175 (aa)	XP_006495743	A0A087WSP0
ENSMUST00000189952	-	4342	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000026131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026131's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026131	Dst	100	94.200	ENSG00000151914	DST	100	99.248	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001725	stress fiber	14576348.	IDA	Component
GO:0003779	actin binding	-	IEA	Function
GO:0005198	structural molecule activity	21873635.	IBA	Function
GO:0005509	calcium ion binding	-	IEA	Function
GO:0005515	protein binding	9971739.14581450.17287360.18638474.19932097.21689717.	IPI	Function
GO:0005634	nucleus	14576348.16289082.	IDA	Component
GO:0005635	nuclear envelope	18638474.	IDA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	19932097.	IDA	Component
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0005789	endoplasmic reticulum membrane	18638474.	IDA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005874	microtubule	-	IEA	Component
GO:0005882	intermediate filament	21873635.	IBA	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0005925	focal adhesion	21873635.	IBA	Component
GO:0005925	focal adhesion	14576348.16289082.	IDA	Component
GO:0007010	cytoskeleton organization	-	IEA	Process
GO:0007155	cell adhesion	-	IEA	Process
GO:0007409	axonogenesis	1634998.	IMP	Process
GO:0008017	microtubule binding	21873635.	IBA	Function
GO:0008017	microtubule binding	10428034.	IDA	Function
GO:0008090	retrograde axonal transport	14581450.17287360.	IMP	Process
GO:0008092	cytoskeletal protein binding	-	IEA	Function
GO:0009898	cytoplasmic side of plasma membrane	16289082.	IDA	Component
GO:0014069	postsynaptic density	17114649.	IDA	Component
GO:0014704	intercalated disc	19932097.	IDA	Component
GO:0015629	actin cytoskeleton	10428034.14576348.16289082.	IDA	Component
GO:0015630	microtubule cytoskeleton	10428034.16289082.	IDA	Component
GO:0016020	membrane	21873635.	IBA	Component
GO:0016020	membrane	16289082.	IDA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0030018	Z disc	19932097.20209123.	IDA	Component
GO:0030054	cell junction	-	IEA	Component
GO:0030056	hemidesmosome	21873635.	IBA	Component
GO:0030056	hemidesmosome	7736575.8707838.	IDA	Component
GO:0030424	axon	17287360.	IDA	Component
GO:0031110	regulation of microtubule polymerization or depolymerization	10428034.	IMP	Process
GO:0031122	cytoplasmic microtubule organization	21873635.	IBA	Process
GO:0031122	cytoplasmic microtubule organization	10428034.	IMP	Process
GO:0031410	cytoplasmic vesicle	14581450.	ISO	Component
GO:0031581	hemidesmosome assembly	21873635.	IBA	Process
GO:0031673	H zone	20209123.	IDA	Component
GO:0042060	wound healing	21873635.	IBA	Process
GO:0042383	sarcolemma	20209123.	IDA	Component
GO:0042803	protein homodimerization activity	14576348.	IDA	Function
GO:0042995	cell projection	-	IEA	Component
GO:0045104	intermediate filament cytoskeleton organization	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0046907	intracellular transport	14576348.	IDA	Process
GO:0048471	perinuclear region of cytoplasm	16289082.	IDA	Component
GO:0060053	neurofilament cytoskeleton	10428034.	IDA	Component
GO:0097038	perinuclear endoplasmic reticulum	16289082.	IDA	Component