EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026179 (Gene tree)
Gene ID: 56695
Gene Symbol: Pnkd
Alias: 2210013N15Rik|2810403H05Rik|Brp17
Full Name: paroxysmal nonkinesiogenic dyskinesia
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 68765 bases
Position: chr1:74284930-74353694
Accession: 1930773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000084477	Lactamase_B	PF00753.27	3.2e-10	1	1
ENSMUSP00000027370	Lactamase_B	PF00753.27	3.7e-10	1	1
ENSMUSP00000084478	Lactamase_B	PF00753.27	4.8e-10	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000152492	-	416	-	-	- (aa)	-	-
ENSMUST00000138620	-	435	-	-	- (aa)	-	-
ENSMUST00000129219	-	881	-	-	- (aa)	-	-
ENSMUST00000087226	-	3054	-	ENSMUSP00000084478	424 (aa)	-	Q69ZP3
ENSMUST00000113805	-	740	-	ENSMUSP00000109436	142 (aa)	-	A0A0R4J1J1
ENSMUST00000027370	-	2937	XM_006496167	ENSMUSP00000027370	385 (aa)	XP_006496230	Q69ZP3
ENSMUST00000087225	-	2859	-	ENSMUSP00000084477	360 (aa)	-	Q69ZP3
ENSMUST00000190398	-	3599	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000026179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026179's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000026179	Pnkd	74	40.977	ENSMUSG00000024158	Hagh	100	43.578
ENSMUSG00000026179	Pnkd	63	42.105	ENSMUSG00000061046	Haghl	100	40.351

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026179	Pnkd	100	96.104	ENSG00000127838	PNKD	100	96.104	Homo_sapiens
ENSMUSG00000026179	Pnkd	89	62.069	ENSAPOG00000019072	pnkd	97	57.429	Acanthochromis_polyacanthus
ENSMUSG00000026179	Pnkd	100	95.844	ENSAMEG00000003089	PNKD	100	95.844	Ailuropoda_melanoleuca
ENSMUSG00000026179	Pnkd	97	54.301	ENSACIG00000015359	pnkd	96	54.301	Amphilophus_citrinellus
ENSMUSG00000026179	Pnkd	89	61.755	ENSAOCG00000011458	-	89	61.755	Amphiprion_ocellaris
ENSMUSG00000026179	Pnkd	73	64.504	ENSAOCG00000024159	pnkd	91	58.000	Amphiprion_ocellaris
ENSMUSG00000026179	Pnkd	89	61.755	ENSAPEG00000011710	pnkd	89	61.755	Amphiprion_percula
ENSMUSG00000026179	Pnkd	89	61.442	ENSATEG00000002727	pnkd	97	57.267	Anabas_testudineus
ENSMUSG00000026179	Pnkd	89	62.187	ENSACAG00000001617	PNKD	99	55.435	Anolis_carolinensis
ENSMUSG00000026179	Pnkd	100	96.623	ENSANAG00000019661	PNKD	100	96.623	Aotus_nancymaae
ENSMUSG00000026179	Pnkd	100	57.735	ENSACLG00000021665	pnkd	89	62.382	Astatotilapia_calliptera
ENSMUSG00000026179	Pnkd	100	58.172	ENSAMXG00000043305	pnkd	91	61.774	Astyanax_mexicanus
ENSMUSG00000026179	Pnkd	100	90.833	ENSBTAG00000003936	PNKD	100	90.833	Bos_taurus
ENSMUSG00000026179	Pnkd	100	96.623	ENSCJAG00000010820	PNKD	100	96.623	Callithrix_jacchus
ENSMUSG00000026179	Pnkd	100	93.766	ENSCAFG00000014632	PNKD	100	93.766	Canis_familiaris
ENSMUSG00000026179	Pnkd	100	90.556	ENSCAFG00020027093	PNKD	100	90.556	Canis_lupus_dingo
ENSMUSG00000026179	Pnkd	100	95.325	ENSCHIG00000002862	PNKD	100	95.325	Capra_hircus
ENSMUSG00000026179	Pnkd	100	96.364	ENSTSYG00000034863	PNKD	100	96.364	Carlito_syrichta
ENSMUSG00000026179	Pnkd	100	96.104	ENSCPOG00000020589	PNKD	100	96.104	Cavia_porcellus
ENSMUSG00000026179	Pnkd	100	96.364	ENSCCAG00000036713	PNKD	100	96.364	Cebus_capucinus
ENSMUSG00000026179	Pnkd	100	96.364	ENSCATG00000041188	PNKD	100	96.364	Cercocebus_atys
ENSMUSG00000026179	Pnkd	100	96.883	ENSCLAG00000012048	PNKD	100	96.883	Chinchilla_lanigera
ENSMUSG00000026179	Pnkd	100	96.364	ENSCSAG00000008892	PNKD	100	96.364	Chlorocebus_sabaeus
ENSMUSG00000026179	Pnkd	100	96.364	ENSCANG00000032283	PNKD	100	96.364	Colobus_angolensis_palliatus
ENSMUSG00000026179	Pnkd	100	98.701	ENSCGRG00001024071	Pnkd	100	98.701	Cricetulus_griseus_chok1gshd
ENSMUSG00000026179	Pnkd	100	96.944	ENSCGRG00000005443	Pnkd	100	97.387	Cricetulus_griseus_crigri
ENSMUSG00000026179	Pnkd	100	55.402	ENSCSEG00000013958	pnkd	99	53.933	Cynoglossus_semilaevis
ENSMUSG00000026179	Pnkd	89	62.069	ENSCVAG00000005723	pnkd	89	62.069	Cyprinodon_variegatus
ENSMUSG00000026179	Pnkd	100	55.956	ENSDARG00000071032	pnkd	89	61.250	Danio_rerio
ENSMUSG00000026179	Pnkd	99	89.694	ENSDNOG00000046154	PNKD	89	88.889	Dasypus_novemcinctus
ENSMUSG00000026179	Pnkd	100	96.641	ENSDORG00000016109	Pnkd	100	96.641	Dipodomys_ordii
ENSMUSG00000026179	Pnkd	100	65.039	ENSETEG00000014587	PNKD	100	65.039	Echinops_telfairi
ENSMUSG00000026179	Pnkd	85	53.595	ENSEBUG00000013857	pnkd	98	53.668	Eptatretus_burgeri
ENSMUSG00000026179	Pnkd	100	90.833	ENSEASG00005012391	PNKD	100	90.833	Equus_asinus_asinus
ENSMUSG00000026179	Pnkd	100	94.805	ENSECAG00000013322	PNKD	100	94.805	Equus_caballus
ENSMUSG00000026179	Pnkd	98	54.875	ENSELUG00000015007	pnkd	91	56.286	Esox_lucius
ENSMUSG00000026179	Pnkd	100	91.111	ENSFCAG00000002373	PNKD	100	91.111	Felis_catus
ENSMUSG00000026179	Pnkd	86	63.107	ENSFALG00000004028	PNKD	95	62.579	Ficedula_albicollis
ENSMUSG00000026179	Pnkd	100	96.364	ENSFDAG00000012326	PNKD	100	96.364	Fukomys_damarensis
ENSMUSG00000026179	Pnkd	89	62.069	ENSFHEG00000010999	pnkd	86	62.069	Fundulus_heteroclitus
ENSMUSG00000026179	Pnkd	100	56.510	ENSGMOG00000009565	pnkd	96	57.267	Gadus_morhua
ENSMUSG00000026179	Pnkd	86	62.701	ENSGALG00000022166	PNKD	99	62.701	Gallus_gallus
ENSMUSG00000026179	Pnkd	89	62.382	ENSGAFG00000013942	pnkd	80	62.382	Gambusia_affinis
ENSMUSG00000026179	Pnkd	99	58.263	ENSGACG00000007119	pnkd	88	62.857	Gasterosteus_aculeatus
ENSMUSG00000026179	Pnkd	88	61.950	ENSGAGG00000017234	PNKD	100	61.950	Gopherus_agassizii
ENSMUSG00000026179	Pnkd	100	96.104	ENSGGOG00000006892	PNKD	100	96.104	Gorilla_gorilla
ENSMUSG00000026179	Pnkd	100	57.735	ENSHBUG00000001234	pnkd	89	62.382	Haplochromis_burtoni
ENSMUSG00000026179	Pnkd	100	95.844	ENSHGLG00000013971	PNKD	100	95.844	Heterocephalus_glaber_female
ENSMUSG00000026179	Pnkd	100	95.844	ENSHGLG00100005225	PNKD	100	95.844	Heterocephalus_glaber_male
ENSMUSG00000026179	Pnkd	99	58.217	ENSHCOG00000018894	pnkd	88	63.057	Hippocampus_comes
ENSMUSG00000026179	Pnkd	100	59.116	ENSIPUG00000013907	pnkd	99	63.844	Ictalurus_punctatus
ENSMUSG00000026179	Pnkd	100	97.922	ENSSTOG00000024593	PNKD	100	97.922	Ictidomys_tridecemlineatus
ENSMUSG00000026179	Pnkd	100	94.805	ENSJJAG00000023559	Pnkd	100	95.844	Jaculus_jaculus
ENSMUSG00000026179	Pnkd	89	61.442	ENSKMAG00000014879	pnkd	89	61.442	Kryptolebias_marmoratus
ENSMUSG00000026179	Pnkd	100	57.143	ENSLBEG00000000985	pnkd	89	61.755	Labrus_bergylta
ENSMUSG00000026179	Pnkd	100	56.667	ENSLOCG00000000821	pnkd	89	61.755	Lepisosteus_oculatus
ENSMUSG00000026179	Pnkd	100	92.689	ENSLAFG00000007427	PNKD	100	92.689	Loxodonta_africana
ENSMUSG00000026179	Pnkd	100	96.364	ENSMFAG00000038281	PNKD	100	96.364	Macaca_fascicularis
ENSMUSG00000026179	Pnkd	50	98.343	ENSMMUG00000022819	-	100	98.343	Macaca_mulatta
ENSMUSG00000026179	Pnkd	100	92.244	ENSMNEG00000041541	PNKD	100	96.497	Macaca_nemestrina
ENSMUSG00000026179	Pnkd	100	96.364	ENSMLEG00000042812	PNKD	100	96.364	Mandrillus_leucophaeus
ENSMUSG00000026179	Pnkd	89	61.755	ENSMAMG00000017212	pnkd	89	61.755	Mastacembelus_armatus
ENSMUSG00000026179	Pnkd	82	62.712	ENSMZEG00005012514	pnkd	100	62.712	Maylandia_zebra
ENSMUSG00000026179	Pnkd	50	51.364	ENSMGAG00000011524	PNKD	100	56.250	Meleagris_gallopavo
ENSMUSG00000026179	Pnkd	100	97.222	ENSMAUG00000013099	Pnkd	100	97.222	Mesocricetus_auratus
ENSMUSG00000026179	Pnkd	100	96.883	ENSMICG00000042547	PNKD	100	96.883	Microcebus_murinus
ENSMUSG00000026179	Pnkd	100	99.059	ENSMOCG00000007956	Pnkd	100	99.059	Microtus_ochrogaster
ENSMUSG00000026179	Pnkd	86	62.460	ENSMMOG00000005679	pnkd	99	58.501	Mola_mola
ENSMUSG00000026179	Pnkd	86	78.778	ENSMODG00000015497	PNKD	97	72.254	Monodelphis_domestica
ENSMUSG00000026179	Pnkd	95	60.580	ENSMALG00000005967	pnkd	80	62.893	Monopterus_albus
ENSMUSG00000026179	Pnkd	100	99.740	MGP_CAROLIEiJ_G0014258	Pnkd	100	99.740	Mus_caroli
ENSMUSG00000026179	Pnkd	100	100.000	MGP_PahariEiJ_G0027496	Pnkd	100	100.000	Mus_pahari
ENSMUSG00000026179	Pnkd	100	99.740	MGP_SPRETEiJ_G0015064	Pnkd	100	99.740	Mus_spretus
ENSMUSG00000026179	Pnkd	100	91.944	ENSMPUG00000016531	PNKD	100	91.944	Mustela_putorius_furo
ENSMUSG00000026179	Pnkd	85	94.771	ENSMLUG00000004125	PNKD	100	94.771	Myotis_lucifugus
ENSMUSG00000026179	Pnkd	100	98.182	ENSNGAG00000014980	Pnkd	100	98.182	Nannospalax_galili
ENSMUSG00000026179	Pnkd	86	62.662	ENSNBRG00000020031	pnkd	96	62.460	Neolamprologus_brichardi
ENSMUSG00000026179	Pnkd	100	72.727	ENSMEUG00000011266	PNKD	100	72.727	Notamacropus_eugenii
ENSMUSG00000026179	Pnkd	100	94.722	ENSODEG00000009734	PNKD	100	94.722	Octodon_degus
ENSMUSG00000026179	Pnkd	100	57.182	ENSONIG00000004389	pnkd	89	61.755	Oreochromis_niloticus
ENSMUSG00000026179	Pnkd	100	92.925	ENSOCUG00000023754	PNKD	100	92.925	Oryctolagus_cuniculus
ENSMUSG00000026179	Pnkd	89	60.923	ENSORLG00000026276	pnkd	90	60.923	Oryzias_latipes
ENSMUSG00000026179	Pnkd	89	60.923	ENSORLG00020008373	pnkd	97	61.921	Oryzias_latipes_hni
ENSMUSG00000026179	Pnkd	89	60.436	ENSORLG00015005276	pnkd	89	60.436	Oryzias_latipes_hsok
ENSMUSG00000026179	Pnkd	89	60.748	ENSOMEG00000016106	pnkd	89	60.748	Oryzias_melastigma
ENSMUSG00000026179	Pnkd	85	96.732	ENSOGAG00000001792	PNKD	100	96.732	Otolemur_garnettii
ENSMUSG00000026179	Pnkd	100	95.584	ENSOARG00000019505	PNKD	100	95.584	Ovis_aries
ENSMUSG00000026179	Pnkd	100	96.104	ENSPPAG00000034969	PNKD	100	96.104	Pan_paniscus
ENSMUSG00000026179	Pnkd	100	91.111	ENSPPRG00000023720	PNKD	100	91.111	Panthera_pardus
ENSMUSG00000026179	Pnkd	100	88.831	ENSPTIG00000021040	PNKD	100	88.831	Panthera_tigris_altaica
ENSMUSG00000026179	Pnkd	100	95.844	ENSPTRG00000012914	PNKD	100	95.844	Pan_troglodytes
ENSMUSG00000026179	Pnkd	100	96.364	ENSPANG00000005752	PNKD	100	96.364	Papio_anubis
ENSMUSG00000026179	Pnkd	97	57.759	ENSPKIG00000011208	pnkd	100	60.063	Paramormyrops_kingsleyae
ENSMUSG00000026179	Pnkd	85	59.804	ENSPMGG00000005169	pnkd	100	59.804	Periophthalmus_magnuspinnatus
ENSMUSG00000026179	Pnkd	100	98.701	ENSPEMG00000010689	Pnkd	100	98.701	Peromyscus_maniculatus_bairdii
ENSMUSG00000026179	Pnkd	85	53.595	ENSPMAG00000006947	pnkd	99	53.595	Petromyzon_marinus
ENSMUSG00000026179	Pnkd	90	79.012	ENSPCIG00000021457	PNKD	96	72.414	Phascolarctos_cinereus
ENSMUSG00000026179	Pnkd	88	62.857	ENSPFOG00000010628	pnkd	95	58.140	Poecilia_formosa
ENSMUSG00000026179	Pnkd	62	66.071	ENSPLAG00000020583	pnkd	95	59.289	Poecilia_latipinna
ENSMUSG00000026179	Pnkd	72	65.251	ENSPMEG00000006542	pnkd	72	60.284	Poecilia_mexicana
ENSMUSG00000026179	Pnkd	88	62.222	ENSPREG00000014434	pnkd	95	57.726	Poecilia_reticulata
ENSMUSG00000026179	Pnkd	100	96.104	ENSPPYG00000013167	PNKD	100	96.104	Pongo_abelii
ENSMUSG00000026179	Pnkd	100	76.364	ENSPCAG00000003946	PNKD	100	76.364	Procavia_capensis
ENSMUSG00000026179	Pnkd	100	97.143	ENSPCOG00000019839	PNKD	100	97.143	Propithecus_coquereli
ENSMUSG00000026179	Pnkd	88	62.579	ENSPNYG00000016327	pnkd	100	62.579	Pundamilia_nyererei
ENSMUSG00000026179	Pnkd	100	59.003	ENSPNAG00000008655	pnkd	100	59.003	Pygocentrus_nattereri
ENSMUSG00000026179	Pnkd	100	99.221	ENSRNOG00000014806	Pnkd	100	99.221	Rattus_norvegicus
ENSMUSG00000026179	Pnkd	100	96.364	ENSRBIG00000031614	PNKD	100	96.364	Rhinopithecus_bieti
ENSMUSG00000026179	Pnkd	100	96.364	ENSRROG00000045542	PNKD	100	96.364	Rhinopithecus_roxellana
ENSMUSG00000026179	Pnkd	100	96.104	ENSSBOG00000036000	PNKD	100	96.104	Saimiri_boliviensis_boliviensis
ENSMUSG00000026179	Pnkd	88	79.439	ENSSHAG00000016339	PNKD	100	79.439	Sarcophilus_harrisii
ENSMUSG00000026179	Pnkd	90	62.462	ENSSFOG00015013028	pnkd	87	62.462	Scleropages_formosus
ENSMUSG00000026179	Pnkd	89	62.069	ENSSMAG00000006812	pnkd	97	56.857	Scophthalmus_maximus
ENSMUSG00000026179	Pnkd	100	56.474	ENSSDUG00000012538	pnkd	89	61.129	Seriola_dumerili
ENSMUSG00000026179	Pnkd	89	61.129	ENSSLDG00000021431	pnkd	86	61.129	Seriola_lalandi_dorsalis
ENSMUSG00000026179	Pnkd	86	49.196	ENSSPUG00000018454	PNKD	98	52.131	Sphenodon_punctatus
ENSMUSG00000026179	Pnkd	89	61.755	ENSSPAG00000007083	pnkd	89	61.755	Stegastes_partitus
ENSMUSG00000026179	Pnkd	100	96.185	ENSSSCG00000029002	PNKD	100	95.584	Sus_scrofa
ENSMUSG00000026179	Pnkd	89	60.188	ENSTRUG00000009399	pnkd	89	60.188	Takifugu_rubripes
ENSMUSG00000026179	Pnkd	100	57.222	ENSTNIG00000010992	pnkd	92	60.121	Tetraodon_nigroviridis
ENSMUSG00000026179	Pnkd	100	93.766	ENSTTRG00000012895	PNKD	100	93.766	Tursiops_truncatus
ENSMUSG00000026179	Pnkd	100	90.556	ENSUAMG00000000289	PNKD	100	90.556	Ursus_americanus
ENSMUSG00000026179	Pnkd	100	79.740	ENSUMAG00000019639	PNKD	100	79.740	Ursus_maritimus
ENSMUSG00000026179	Pnkd	100	95.844	ENSVVUG00000007348	PNKD	100	95.844	Vulpes_vulpes
ENSMUSG00000026179	Pnkd	86	63.666	ENSXETG00000014931	pnkd	99	64.078	Xenopus_tropicalis
ENSMUSG00000026179	Pnkd	86	62.987	ENSXCOG00000014370	pnkd	95	62.987	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004416	hydroxyacylglutathione hydrolase activity	-	IEA	Function
GO:0005515	protein binding	25730884.	IPI	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0016020	membrane	22214848.	ISO	Component
GO:0016787	hydrolase activity	-	IEA	Function
GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	-	IEA	Process
GO:0032225	regulation of synaptic transmission, dopaminergic	22214848.	IMP	Process
GO:0042053	regulation of dopamine metabolic process	22214848.	IMP	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0046929	negative regulation of neurotransmitter secretion	25730884.	IGI	Process
GO:0046929	negative regulation of neurotransmitter secretion	-	ISO	Process
GO:0050884	neuromuscular process controlling posture	22214848.	IMP	Process