EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026192 (Gene tree)
Gene ID: 108147
Gene Symbol: Atic
Alias: 2610509C24Rik
Full Name: 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 22482
Position: chr1: 71557150-71579631
Accession: 1351352
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000187982	-	2773	-	-	- (aa)	-	-
ENSMUST00000027384	-	2845	-	ENSMUSP00000027384	592 (aa)	-	Q9CWJ9
ENSMUST00000154855	-	434	-	-	- (aa)	-	-
ENSMUST00000155769	-	1631	-	-	- (aa)	-	-
ENSMUST00000136443	-	2576	-	-	- (aa)	-	-
ENSMUST00000148077	-	2533	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000026192's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00230	Purine metabolism	KEGG
mmu00670	One carbon pool by folate	KEGG
mmu01100	Metabolic pathways	KEGG
mmu01523	Antifolate resistance	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026192's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026192	Atic	100	70.270	FBgn0039241	CG11089	100	70.270	Drosophila_melanogaster
ENSMUSG00000026192	Atic	100	91.047	ENSG00000138363	ATIC	100	91.176	Homo_sapiens
ENSMUSG00000026192	Atic	99	61.525	YLR028C		99	61.525	Saccharomyces_cerevisiae
ENSMUSG00000026192	Atic	99	61.083	YMR120C		99	61.083	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003824	catalytic activity	-	IEA	Function
GO:0003937	IMP cyclohydrolase activity	-	ISO	Function
GO:0004643	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	-	ISO	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006164	purine nucleotide biosynthetic process	-	IEA	Process
GO:0006189	'de novo' IMP biosynthetic process	-	ISO	Process
GO:0008152	metabolic process	-	IEA	Process
GO:0009116	nucleoside metabolic process	-	ISO	Process
GO:0009259	ribonucleotide metabolic process	-	ISO	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0016787	hydrolase activity	-	IEA	Function
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0046452	dihydrofolate metabolic process	-	ISO	Process
GO:0046654	tetrahydrofolate biosynthetic process	-	ISO	Process
GO:0098761	cellular response to interleukin-7	29581031.	IDA	Process