EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026199 (Gene tree)
Gene ID: 52231
Gene Symbol: Ankzf1
Alias: 1300008P06Rik|2810025E10Rik|D1Ertd161e
Full Name: ankyrin repeat and zinc finger domain containing 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 7237
Position: chr1: 75192151-75199387
Accession: 1098746
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000127860	-	832	-	-	- (aa)	-	-
ENSMUST00000145459	-	2770	-	ENSMUSP00000135971	287 (aa)	-	J3KMQ5
ENSMUST00000134233	-	3201	-	-	- (aa)	-	-
ENSMUST00000127625	-	1167	-	ENSMUSP00000137179	225 (aa)	-	J3QPB4
ENSMUST00000131788	-	3426	-	-	- (aa)	-	-
ENSMUST00000134378	-	1093	NR_051999	-	- (aa)	-	-
ENSMUST00000152233	-	2739	XM_006496507	ENSMUSP00000136163	748 (aa)	XP_006496570	J3QM81
ENSMUST00000151887	-	2259	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000026199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026199's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026199	Ankzf1	69	33.778	WBGene00019457	vms-1	72	33.778	Caenorhabditis_elegans
ENSMUSG00000026199	Ankzf1	95	78.291	ENSG00000163516	ANKZF1	100	83.478	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004843	thiol-dependent ubiquitin-specific protease activity	21873635.	IBA	Function
GO:0005515	protein binding	21070972.	IPI	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0030433	ubiquitin-dependent ERAD pathway	21873635.	IBA	Process
GO:0036266	Cdc48p-Npl4p-Vms1p AAA ATPase complex	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0070301	cellular response to hydrogen peroxide	-	ISO	Process
GO:0071630	nuclear protein quality control by the ubiquitin-proteasome system	21873635.	IBA	Process
GO:0072671	mitochondria-associated ubiquitin-dependent protein catabolic process	21873635.	IBA	Process