EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026208 (Gene tree)
Gene ID: 13346
Gene Symbol: Des
Alias: -
Full Name: desmin
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 8251
Position: chr1: 75360329-75368579
Accession: 94885
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000125948	-	835	-	-	- (aa)	-	-
ENSMUST00000027409	-	3028	-	ENSMUSP00000027409	469 (aa)	-	P31001
ENSMUST00000144894	-	784	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000026208's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05410	Hypertrophic cardiomyopathy (HCM)	KEGG
mmu05412	Arrhythmogenic right ventricular cardiomyopathy (ARVC)	KEGG
mmu05414	Dilated cardiomyopathy (DCM)	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026208's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005198	structural molecule activity	-	IEA	Function
GO:0005200	structural constituent of cytoskeleton	2370005.	TAS	Function
GO:0005515	protein binding	11694502.21135508.26816005.	IPI	Function
GO:0005634	nucleus	26787680.	IDA	Component
GO:0005737	cytoplasm	21177767.26787680.	IDA	Component
GO:0005856	cytoskeleton	11694502.	IDA	Component
GO:0005882	intermediate filament	16917092.	IDA	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0005911	cell-cell junction	24532688.	IDA	Component
GO:0005916	fascia adherens	11732910.	IDA	Component
GO:0005921	gap junction	-	ISO	Component
GO:0007517	muscle organ development	7720554.	TAS	Process
GO:0008092	cytoskeletal protein binding	-	ISO	Function
GO:0014704	intercalated disc	-	ISO	Component
GO:0016020	membrane	-	IEA	Component
GO:0030018	Z disc	10532952.11694502.14627610.15138196.26787680.	IDA	Component
GO:0030018	Z disc	-	ISO	Component
GO:0031594	neuromuscular junction	11694502.	IDA	Component
GO:0042383	sarcolemma	11694502.25394388.	IDA	Component
GO:0042383	sarcolemma	-	ISO	Component
GO:0042802	identical protein binding	-	ISO	Function
GO:0043292	contractile fiber	14627610.	IDA	Component
GO:0045098	type III intermediate filament	-	ISO	Component
GO:0045109	intermediate filament organization	-	ISO	Process
GO:0045111	intermediate filament cytoskeleton	-	ISO	Component
GO:0097512	cardiac myofibril	-	ISO	Component