EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026248 (Gene tree)
Gene ID: 69163
Gene Symbol: Mrpl44
Alias: 1810030E18Rik|5730593H20Rik
Full Name: mitochondrial ribosomal protein L44
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 5428
Position: chr1: 79776018-79781445
Accession: 1916413
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000189176	-	885	-	-	- (aa)	-	-
ENSMUST00000027464	-	1424	-	ENSMUSP00000027464	333 (aa)	-	Q9CY73

Gene Model

Click here to download ENSMUSG00000026248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026248's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026248	Mrpl44	90	36.000	FBgn0037330	mRpL44	91	36.000	Drosophila_melanogaster
ENSMUSG00000026248	Mrpl44	100	85.586	ENSG00000135900	MRPL44	100	85.586	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0003725	double-stranded RNA binding	21873635.	IBA	Function
GO:0004518	nuclease activity	-	IEA	Function
GO:0004519	endonuclease activity	-	IEA	Function
GO:0004525	ribonuclease III activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006396	RNA processing	21873635.	IBA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0030422	production of siRNA involved in RNA interference	21873635.	IBA	Process
GO:0031053	primary miRNA processing	21873635.	IBA	Process
GO:0031054	pre-miRNA processing	21873635.	IBA	Process
GO:0070125	mitochondrial translational elongation	-	ISO	Process