EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMUSG00000026276 (Gene tree)
Gene ID: 18000
Gene Symbol: Sept2
Alias: Nedd5
Full Name: septin 2
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 31297 bases
Position: chr1:93478964-93510260
Accession: 97298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000120694	MMR_HSR1	PF01926.23	1.2e-07	1	1
ENSMUSP00000120511	MMR_HSR1	PF01926.23	1.2e-07	1	1
ENSMUSP00000108534	MMR_HSR1	PF01926.23	1.3e-07	1	1
ENSMUSP00000117517	MMR_HSR1	PF01926.23	1.3e-07	1	1
ENSMUSP00000118621	MMR_HSR1	PF01926.23	1.7e-07	1	1
ENSMUSP00000027495	MMR_HSR1	PF01926.23	1.8e-07	1	1
ENSMUSP00000115536	MMR_HSR1	PF01926.23	1.8e-07	1	1
ENSMUSP00000121974	MMR_HSR1	PF01926.23	2.1e-07	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000129211	-	784	-	ENSMUSP00000120511	213 (aa)	-	D3YYB1
ENSMUST00000136182	-	512	-	ENSMUSP00000118621	107 (aa)	-	F6UKN5
ENSMUST00000142401	-	552	-	ENSMUSP00000121974	177 (aa)	-	D3Z1S1
ENSMUST00000131175	-	730	-	ENSMUSP00000120694	212 (aa)	-	F6WYM0
ENSMUST00000149532	-	477	-	ENSMUSP00000115536	120 (aa)	-	D3YZU7
ENSMUST00000152476	-	466	-	-	- (aa)	-	-
ENSMUST00000157021	-	418	-	ENSMUSP00000134173	45 (aa)	-	G3UYQ0
ENSMUST00000150931	-	779	-	ENSMUSP00000117517	221 (aa)	-	D3Z3C0
ENSMUST00000153826	-	424	-	ENSMUSP00000114614	77 (aa)	-	D3YV76
ENSMUST00000027495	-	3779	-	ENSMUSP00000027495	361 (aa)	-	P42208
ENSMUST00000112912	-	756	-	ENSMUSP00000108534	221 (aa)	-	D3Z3C0
ENSMUST00000188923	-	3310	-	-	- (aa)	-	-
ENSMUST00000152778	-	696	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000026276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026276's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000026276	Sept2	100	64.486	ENSMUSG00000072214	Sept5	100	66.667
ENSMUSG00000026276	Sept2	100	48.148	ENSMUSG00000022542	Sept12	92	43.077
ENSMUSG00000026276	Sept2	100	64.486	ENSMUSG00000116594	AC133488.1	82	64.548
ENSMUSG00000026276	Sept2	100	49.778	ENSMUSG00000059248	Sept9	98	45.104
ENSMUSG00000026276	Sept2	100	41.818	ENSMUSG00000018398	Sept8	70	42.812
ENSMUSG00000026276	Sept2	100	50.000	ENSMUSG00000022456	Sept3	89	49.007
ENSMUSG00000026276	Sept2	100	100.000	ENSMUSG00000116048	Sept2	100	100.000
ENSMUSG00000026276	Sept2	100	65.421	ENSMUSG00000020486	Sept4	97	66.230
ENSMUSG00000026276	Sept2	100	62.037	ENSMUSG00000001833	Sept7	65	62.887
ENSMUSG00000026276	Sept2	100	41.228	ENSMUSG00000019917	Sept10	67	43.144
ENSMUSG00000026276	Sept2	100	42.202	ENSMUSG00000058013	Sept11	69	43.234
ENSMUSG00000026276	Sept2	100	41.284	ENSMUSG00000050379	Sept6	69	43.234
ENSMUSG00000026276	Sept2	100	60.748	ENSMUSG00000000486	Sept1	100	64.828

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026276	Sept2	100	94.393	ENSAPOG00000001837	sept2	95	87.919	Acanthochromis_polyacanthus
ENSMUSG00000026276	Sept2	100	99.065	ENSAMEG00000016539	SEPT2	100	97.765	Ailuropoda_melanoleuca
ENSMUSG00000026276	Sept2	100	94.393	ENSACIG00000021718	sept2	90	92.258	Amphilophus_citrinellus
ENSMUSG00000026276	Sept2	100	94.393	ENSAOCG00000000954	sept2	94	91.098	Amphiprion_ocellaris
ENSMUSG00000026276	Sept2	100	94.393	ENSAPEG00000013904	sept2	93	88.623	Amphiprion_percula
ENSMUSG00000026276	Sept2	100	94.393	ENSATEG00000019489	sept2	99	89.167	Anabas_testudineus
ENSMUSG00000026276	Sept2	100	98.131	ENSACAG00000001408	SEPT2	99	93.889	Anolis_carolinensis
ENSMUSG00000026276	Sept2	100	98.333	ENSANAG00000023789	SEPT2	99	95.975	Aotus_nancymaae
ENSMUSG00000026276	Sept2	100	94.393	ENSACLG00000009428	sept2	99	86.275	Astatotilapia_calliptera
ENSMUSG00000026276	Sept2	100	93.458	ENSAMXG00000039525	sept2	93	92.169	Astyanax_mexicanus
ENSMUSG00000026276	Sept2	100	98.190	ENSBTAG00000002608	SEPT2	100	97.507	Bos_taurus
ENSMUSG00000026276	Sept2	100	98.338	ENSCJAG00000006122	-	98	98.423	Callithrix_jacchus
ENSMUSG00000026276	Sept2	100	100.000	ENSCAFG00000012960	SEPT2	100	98.300	Canis_familiaris
ENSMUSG00000026276	Sept2	100	100.000	ENSCAFG00020025094	-	100	96.904	Canis_lupus_dingo
ENSMUSG00000026276	Sept2	100	98.190	ENSCHIG00000026614	SEPT2	100	96.953	Capra_hircus
ENSMUSG00000026276	Sept2	100	100.000	ENSTSYG00000003579	-	100	99.169	Carlito_syrichta
ENSMUSG00000026276	Sept2	100	86.916	ENSCPOG00000034399	-	100	78.333	Cavia_porcellus
ENSMUSG00000026276	Sept2	100	100.000	ENSCPOG00000013687	-	100	98.615	Cavia_porcellus
ENSMUSG00000026276	Sept2	100	98.333	ENSCCAG00000031252	SEPT2	100	84.211	Cebus_capucinus
ENSMUSG00000026276	Sept2	100	99.167	ENSCATG00000033533	SEPT2	100	98.615	Cercocebus_atys
ENSMUSG00000026276	Sept2	100	85.833	ENSCLAG00000003230	-	98	71.350	Chinchilla_lanigera
ENSMUSG00000026276	Sept2	100	100.000	ENSCLAG00000002255	-	100	98.892	Chinchilla_lanigera
ENSMUSG00000026276	Sept2	100	81.667	ENSCLAG00000007700	-	100	65.097	Chinchilla_lanigera
ENSMUSG00000026276	Sept2	100	99.167	ENSCSAG00000005773	SEPT2	100	98.615	Chlorocebus_sabaeus
ENSMUSG00000026276	Sept2	100	94.609	ENSCHOG00000008715	SEPT2	100	94.609	Choloepus_hoffmanni
ENSMUSG00000026276	Sept2	100	99.065	ENSCPBG00000002410	SEPT2	100	93.646	Chrysemys_picta_bellii
ENSMUSG00000026276	Sept2	100	85.981	ENSCING00000008866	-	99	80.723	Ciona_intestinalis
ENSMUSG00000026276	Sept2	100	85.981	ENSCSAVG00000003688	-	96	82.746	Ciona_savignyi
ENSMUSG00000026276	Sept2	100	99.167	ENSCANG00000034470	SEPT2	100	96.584	Colobus_angolensis_palliatus
ENSMUSG00000026276	Sept2	100	100.000	ENSCGRG00001009996	-	100	98.615	Cricetulus_griseus_chok1gshd
ENSMUSG00000026276	Sept2	100	100.000	ENSCGRG00000014494	-	100	98.305	Cricetulus_griseus_crigri
ENSMUSG00000026276	Sept2	100	94.393	ENSCSEG00000017561	sept2	95	88.889	Cynoglossus_semilaevis
ENSMUSG00000026276	Sept2	100	90.654	ENSCVAG00000008351	sept2	89	90.034	Cyprinodon_variegatus
ENSMUSG00000026276	Sept2	100	94.393	ENSDARG00000027590	sept2	95	88.252	Danio_rerio
ENSMUSG00000026276	Sept2	100	99.167	ENSDNOG00000013772	SEPT2	100	97.507	Dasypus_novemcinctus
ENSMUSG00000026276	Sept2	100	100.000	ENSDORG00000000106	-	100	99.446	Dipodomys_ordii
ENSMUSG00000026276	Sept2	94	98.230	ENSETEG00000001868	-	76	98.230	Echinops_telfairi
ENSMUSG00000026276	Sept2	100	87.850	ENSEBUG00000006082	sept2	75	82.184	Eptatretus_burgeri
ENSMUSG00000026276	Sept2	100	73.832	ENSEBUG00000009786	-	96	63.284	Eptatretus_burgeri
ENSMUSG00000026276	Sept2	100	100.000	ENSEASG00005008254	SEPT2	100	98.338	Equus_asinus_asinus
ENSMUSG00000026276	Sept2	100	100.000	ENSECAG00000017553	SEPT2	100	98.338	Equus_caballus
ENSMUSG00000026276	Sept2	100	94.393	ENSELUG00000018507	sept2	95	88.623	Esox_lucius
ENSMUSG00000026276	Sept2	100	99.167	ENSFCAG00000002797	SEPT2	98	97.507	Felis_catus
ENSMUSG00000026276	Sept2	100	99.065	ENSFALG00000003429	SEPT2	100	95.028	Ficedula_albicollis
ENSMUSG00000026276	Sept2	100	100.000	ENSFDAG00000005819	SEPT2	100	98.892	Fukomys_damarensis
ENSMUSG00000026276	Sept2	100	93.458	ENSFHEG00000017419	sept2	95	86.982	Fundulus_heteroclitus
ENSMUSG00000026276	Sept2	100	95.327	ENSGMOG00000017631	sept2	86	91.940	Gadus_morhua
ENSMUSG00000026276	Sept2	100	100.000	ENSGALG00000005809	SEPT2	99	95.278	Gallus_gallus
ENSMUSG00000026276	Sept2	100	93.458	ENSGAFG00000018172	sept2	99	86.275	Gambusia_affinis
ENSMUSG00000026276	Sept2	100	94.393	ENSGACG00000015721	sept2	93	90.208	Gasterosteus_aculeatus
ENSMUSG00000026276	Sept2	100	99.065	ENSGAGG00000004594	SEPT2	100	94.199	Gopherus_agassizii
ENSMUSG00000026276	Sept2	100	99.167	ENSGGOG00000004597	SEPT2	100	98.615	Gorilla_gorilla
ENSMUSG00000026276	Sept2	100	94.393	ENSHBUG00000007012	sept2	99	85.255	Haplochromis_burtoni
ENSMUSG00000026276	Sept2	100	100.000	ENSHGLG00000005291	SEPT2	100	98.892	Heterocephalus_glaber_female
ENSMUSG00000026276	Sept2	100	97.196	ENSHGLG00000014923	-	100	87.535	Heterocephalus_glaber_female
ENSMUSG00000026276	Sept2	100	100.000	ENSHGLG00100018899	SEPT2	100	98.892	Heterocephalus_glaber_male
ENSMUSG00000026276	Sept2	100	97.196	ENSHGLG00100001715	-	100	87.535	Heterocephalus_glaber_male
ENSMUSG00000026276	Sept2	100	94.393	ENSIPUG00000017270	sept2	100	88.251	Ictalurus_punctatus
ENSMUSG00000026276	Sept2	100	100.000	ENSSTOG00000013357	SEPT2	100	99.162	Ictidomys_tridecemlineatus
ENSMUSG00000026276	Sept2	100	99.167	ENSJJAG00000019868	-	100	98.615	Jaculus_jaculus
ENSMUSG00000026276	Sept2	100	94.393	ENSKMAG00000002786	sept2	98	90.000	Kryptolebias_marmoratus
ENSMUSG00000026276	Sept2	100	94.393	ENSLBEG00000007372	sept2	95	88.959	Labrus_bergylta
ENSMUSG00000026276	Sept2	100	94.393	ENSLOCG00000006303	sept2	95	86.158	Lepisosteus_oculatus
ENSMUSG00000026276	Sept2	100	98.131	ENSLAFG00000030960	-	100	96.122	Loxodonta_africana
ENSMUSG00000026276	Sept2	100	99.095	ENSLAFG00000011964	-	100	97.784	Loxodonta_africana
ENSMUSG00000026276	Sept2	100	99.167	ENSMFAG00000039700	SEPT2	100	98.615	Macaca_fascicularis
ENSMUSG00000026276	Sept2	100	99.167	ENSMMUG00000004736	SEPT2	100	98.615	Macaca_mulatta
ENSMUSG00000026276	Sept2	100	99.167	ENSMNEG00000004313	SEPT2	100	98.615	Macaca_nemestrina
ENSMUSG00000026276	Sept2	100	99.167	ENSMLEG00000043469	SEPT2	100	98.615	Mandrillus_leucophaeus
ENSMUSG00000026276	Sept2	100	94.393	ENSMAMG00000004271	sept2	94	90.801	Mastacembelus_armatus
ENSMUSG00000026276	Sept2	100	94.393	ENSMZEG00005005022	sept2	99	88.611	Maylandia_zebra
ENSMUSG00000026276	Sept2	100	100.000	ENSMGAG00000003759	SEPT2	99	94.972	Meleagris_gallopavo
ENSMUSG00000026276	Sept2	100	100.000	ENSMAUG00000011950	-	100	98.045	Mesocricetus_auratus
ENSMUSG00000026276	Sept2	100	100.000	ENSMICG00000000909	SEPT2	100	98.615	Microcebus_murinus
ENSMUSG00000026276	Sept2	100	100.000	ENSMOCG00000014906	-	100	99.169	Microtus_ochrogaster
ENSMUSG00000026276	Sept2	100	95.327	ENSMMOG00000018068	sept2	95	88.166	Mola_mola
ENSMUSG00000026276	Sept2	100	99.065	ENSMODG00000016041	SEPT2	97	96.591	Monodelphis_domestica
ENSMUSG00000026276	Sept2	100	94.393	ENSMALG00000002736	sept2	98	90.057	Monopterus_albus
ENSMUSG00000026276	Sept2	100	100.000	MGP_CAROLIEiJ_G0014457	-	100	100.000	Mus_caroli
ENSMUSG00000026276	Sept2	100	100.000	MGP_PahariEiJ_G0027693	-	100	100.000	Mus_pahari
ENSMUSG00000026276	Sept2	100	100.000	MGP_SPRETEiJ_G0015261	-	100	100.000	Mus_spretus
ENSMUSG00000026276	Sept2	100	100.000	ENSMPUG00000000166	SEPT2	100	98.338	Mustela_putorius_furo
ENSMUSG00000026276	Sept2	100	99.065	ENSMLUG00000007108	SEPT2	100	97.486	Myotis_lucifugus
ENSMUSG00000026276	Sept2	100	100.000	ENSNGAG00000022412	-	100	98.892	Nannospalax_galili
ENSMUSG00000026276	Sept2	100	94.393	ENSNBRG00000003359	sept2	99	88.611	Neolamprologus_brichardi
ENSMUSG00000026276	Sept2	100	99.167	ENSNLEG00000013873	SEPT2	100	98.615	Nomascus_leucogenys
ENSMUSG00000026276	Sept2	96	99.029	ENSMEUG00000016519	-	97	90.228	Notamacropus_eugenii
ENSMUSG00000026276	Sept2	96	89.320	ENSMEUG00000007833	-	100	90.780	Notamacropus_eugenii
ENSMUSG00000026276	Sept2	100	96.070	ENSOPRG00000013796	SEPT2	100	95.664	Ochotona_princeps
ENSMUSG00000026276	Sept2	100	100.000	ENSODEG00000010316	-	100	98.754	Octodon_degus
ENSMUSG00000026276	Sept2	100	99.065	ENSODEG00000018677	-	100	98.131	Octodon_degus
ENSMUSG00000026276	Sept2	100	99.065	ENSODEG00000019855	-	100	97.521	Octodon_degus
ENSMUSG00000026276	Sept2	100	94.393	ENSONIG00000010605	sept2	99	88.611	Oreochromis_niloticus
ENSMUSG00000026276	Sept2	100	99.065	ENSOANG00000011758	-	100	95.845	Ornithorhynchus_anatinus
ENSMUSG00000026276	Sept2	100	100.000	ENSOCUG00000015500	SEPT2	100	97.784	Oryctolagus_cuniculus
ENSMUSG00000026276	Sept2	100	94.393	ENSORLG00000004835	sept2	97	92.236	Oryzias_latipes
ENSMUSG00000026276	Sept2	100	94.393	ENSORLG00020003263	sept2	96	87.429	Oryzias_latipes_hni
ENSMUSG00000026276	Sept2	100	94.393	ENSORLG00015006412	sept2	96	87.429	Oryzias_latipes_hsok
ENSMUSG00000026276	Sept2	100	94.393	ENSOMEG00000008923	sept2	95	91.098	Oryzias_melastigma
ENSMUSG00000026276	Sept2	100	100.000	ENSOGAG00000004457	SEPT2	100	97.784	Otolemur_garnettii
ENSMUSG00000026276	Sept2	100	97.196	ENSOARG00000017810	-	99	86.944	Ovis_aries
ENSMUSG00000026276	Sept2	100	99.167	ENSPPAG00000034127	SEPT2	100	98.615	Pan_paniscus
ENSMUSG00000026276	Sept2	100	99.167	ENSPPRG00000012154	SEPT2	100	97.230	Panthera_pardus
ENSMUSG00000026276	Sept2	100	99.167	ENSPTIG00000004202	SEPT2	100	97.230	Panthera_tigris_altaica
ENSMUSG00000026276	Sept2	100	99.167	ENSPTRG00000023481	SEPT2	100	95.957	Pan_troglodytes
ENSMUSG00000026276	Sept2	100	99.167	ENSPANG00000007917	SEPT2	100	98.615	Papio_anubis
ENSMUSG00000026276	Sept2	100	94.393	ENSPKIG00000002533	sept2	100	86.567	Paramormyrops_kingsleyae
ENSMUSG00000026276	Sept2	100	98.131	ENSPSIG00000009642	SEPT2	100	94.199	Pelodiscus_sinensis
ENSMUSG00000026276	Sept2	100	94.393	ENSPMGG00000012338	sept2	92	90.057	Periophthalmus_magnuspinnatus
ENSMUSG00000026276	Sept2	100	100.000	ENSPEMG00000022937	-	100	99.169	Peromyscus_maniculatus_bairdii
ENSMUSG00000026276	Sept2	100	99.065	ENSPCIG00000005866	SEPT2	99	96.375	Phascolarctos_cinereus
ENSMUSG00000026276	Sept2	100	93.458	ENSPFOG00000017007	sept2	99	88.333	Poecilia_formosa
ENSMUSG00000026276	Sept2	100	93.458	ENSPLAG00000003540	sept2	99	84.987	Poecilia_latipinna
ENSMUSG00000026276	Sept2	100	93.458	ENSPMEG00000003785	sept2	99	84.987	Poecilia_mexicana
ENSMUSG00000026276	Sept2	100	93.458	ENSPREG00000007538	sept2	100	86.217	Poecilia_reticulata
ENSMUSG00000026276	Sept2	100	99.167	ENSPPYG00000013353	SEPT2	100	98.338	Pongo_abelii
ENSMUSG00000026276	Sept2	96	97.087	ENSPCAG00000003337	SEPT2	100	96.845	Procavia_capensis
ENSMUSG00000026276	Sept2	100	95.405	ENSPVAG00000000558	SEPT2	100	95.405	Pteropus_vampyrus
ENSMUSG00000026276	Sept2	100	94.393	ENSPNYG00000000783	sept2	99	88.333	Pundamilia_nyererei
ENSMUSG00000026276	Sept2	100	93.458	ENSPNAG00000010720	sept2	92	91.867	Pygocentrus_nattereri
ENSMUSG00000026276	Sept2	100	99.548	ENSRNOG00000017952	Sept2	100	98.615	Rattus_norvegicus
ENSMUSG00000026276	Sept2	100	99.167	ENSRBIG00000032420	SEPT2	91	98.061	Rhinopithecus_bieti
ENSMUSG00000026276	Sept2	100	99.167	ENSRROG00000031700	SEPT2	100	98.061	Rhinopithecus_roxellana
ENSMUSG00000026276	Sept2	100	98.333	ENSSBOG00000016731	SEPT2	100	98.061	Saimiri_boliviensis_boliviensis
ENSMUSG00000026276	Sept2	100	99.065	ENSSHAG00000012877	SEPT2	98	97.167	Sarcophilus_harrisii
ENSMUSG00000026276	Sept2	100	94.393	ENSSFOG00015018742	sept2	97	86.413	Scleropages_formosus
ENSMUSG00000026276	Sept2	100	94.393	ENSSMAG00000007297	sept2	98	90.286	Scophthalmus_maximus
ENSMUSG00000026276	Sept2	100	94.393	ENSSDUG00000011223	sept2	94	91.098	Seriola_dumerili
ENSMUSG00000026276	Sept2	100	94.393	ENSSLDG00000016125	sept2	94	91.098	Seriola_lalandi_dorsalis
ENSMUSG00000026276	Sept2	92	99.091	ENSSARG00000012133	-	76	99.091	Sorex_araneus
ENSMUSG00000026276	Sept2	100	94.393	ENSSPAG00000001557	sept2	94	91.098	Stegastes_partitus
ENSMUSG00000026276	Sept2	100	98.190	ENSSSCG00000016370	SEPT2	100	97.507	Sus_scrofa
ENSMUSG00000026276	Sept2	100	99.065	ENSTGUG00000006160	SEPT2	100	94.751	Taeniopygia_guttata
ENSMUSG00000026276	Sept2	100	95.327	ENSTRUG00000021827	sept2	94	91.691	Takifugu_rubripes
ENSMUSG00000026276	Sept2	100	95.327	ENSTNIG00000007849	sept2	94	91.395	Tetraodon_nigroviridis
ENSMUSG00000026276	Sept2	100	100.000	ENSUAMG00000017781	SEPT2	100	97.514	Ursus_americanus
ENSMUSG00000026276	Sept2	100	100.000	ENSUMAG00000010525	SEPT2	100	97.784	Ursus_maritimus
ENSMUSG00000026276	Sept2	100	100.000	ENSVVUG00000022793	-	100	98.061	Vulpes_vulpes
ENSMUSG00000026276	Sept2	100	90.833	ENSXETG00000012166	sept2	99	90.085	Xenopus_tropicalis
ENSMUSG00000026276	Sept2	92	93.694	ENSXCOG00000007338	sept2	100	78.453	Xiphophorus_couchianus
ENSMUSG00000026276	Sept2	100	93.458	ENSXMAG00000004256	sept2	99	88.333	Xiphophorus_maculatus