EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026377 (Gene tree)
Gene ID: 67949
Gene Symbol: Nifk
Alias: C130020J04Rik|Mki67ip
Full Name: nucleolar protein interacting with the FHA domain of MKI67
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 11984 bases
Position: chr1:118321839-118333822
Accession: 1915199
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000125006	RRM_1	PF00076.22	1.6e-15	1	1
ENSMUSP00000027626	RRM_1	PF00076.22	1.2e-14	1	1
ENSMUSP00000108308	RRM_1	PF00076.22	1.8e-06	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000112688	-	849	-	ENSMUSP00000108308	269 (aa)	-	Q91VE6
ENSMUST00000161495	-	357	-	ENSMUSP00000125006	101 (aa)	-	E0CXU3
ENSMUST00000027626	-	1889	-	ENSMUSP00000027626	317 (aa)	-	Q91VE6

Gene Model

Click here to download ENSMUSG00000026377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026377's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026377	Nifk	91	73.913	ENSG00000155438	NIFK	99	62.424	Homo_sapiens
ENSMUSG00000026377	Nifk	94	57.895	ENSAPOG00000005547	nifk	85	43.299	Acanthochromis_polyacanthus
ENSMUSG00000026377	Nifk	94	69.474	ENSAMEG00000005074	NIFK	100	55.108	Ailuropoda_melanoleuca
ENSMUSG00000026377	Nifk	85	63.953	ENSACIG00000018626	nifk	77	41.844	Amphilophus_citrinellus
ENSMUSG00000026377	Nifk	94	56.436	ENSAOCG00000012662	nifk	85	42.612	Amphiprion_ocellaris
ENSMUSG00000026377	Nifk	94	56.436	ENSAPEG00000002123	nifk	85	42.955	Amphiprion_percula
ENSMUSG00000026377	Nifk	88	59.551	ENSATEG00000006206	nifk	86	43.816	Anabas_testudineus
ENSMUSG00000026377	Nifk	95	58.333	ENSACAG00000004655	NIFK	87	44.068	Anolis_carolinensis
ENSMUSG00000026377	Nifk	91	71.739	ENSANAG00000029859	-	98	54.859	Aotus_nancymaae
ENSMUSG00000026377	Nifk	91	67.391	ENSANAG00000032684	-	99	48.562	Aotus_nancymaae
ENSMUSG00000026377	Nifk	88	59.551	ENSACLG00000000228	nifk	86	39.863	Astatotilapia_calliptera
ENSMUSG00000026377	Nifk	97	54.082	ENSAMXG00000029665	nifk	82	42.182	Astyanax_mexicanus
ENSMUSG00000026377	Nifk	94	67.368	ENSBTAG00000019387	NIFK	99	54.890	Bos_taurus
ENSMUSG00000026377	Nifk	91	70.652	ENSCJAG00000013386	NIFK	100	53.918	Callithrix_jacchus
ENSMUSG00000026377	Nifk	94	71.579	ENSCAFG00000004710	NIFK	99	54.603	Canis_familiaris
ENSMUSG00000026377	Nifk	87	74.157	ENSCAFG00020011751	NIFK	99	53.355	Canis_lupus_dingo
ENSMUSG00000026377	Nifk	94	65.263	ENSCHIG00000010512	NIFK	99	54.890	Capra_hircus
ENSMUSG00000026377	Nifk	94	67.368	ENSTSYG00000001411	NIFK	99	53.994	Carlito_syrichta
ENSMUSG00000026377	Nifk	91	72.826	ENSCPOG00000007472	NIFK	100	54.259	Cavia_porcellus
ENSMUSG00000026377	Nifk	90	72.527	ENSCCAG00000025869	NIFK	98	56.159	Cebus_capucinus
ENSMUSG00000026377	Nifk	91	75.000	ENSCATG00000015239	NIFK	100	55.799	Cercocebus_atys
ENSMUSG00000026377	Nifk	91	72.826	ENSCLAG00000006296	NIFK	100	56.522	Chinchilla_lanigera
ENSMUSG00000026377	Nifk	90	64.835	ENSCSAG00000017231	-	100	42.903	Chlorocebus_sabaeus
ENSMUSG00000026377	Nifk	91	75.000	ENSCSAG00000016704	NIFK	100	55.172	Chlorocebus_sabaeus
ENSMUSG00000026377	Nifk	87	67.045	ENSCHOG00000002227	NIFK	98	54.348	Choloepus_hoffmanni
ENSMUSG00000026377	Nifk	88	65.169	ENSCPBG00000013739	NIFK	100	44.654	Chrysemys_picta_bellii
ENSMUSG00000026377	Nifk	91	75.000	ENSCANG00000036234	NIFK	100	55.486	Colobus_angolensis_palliatus
ENSMUSG00000026377	Nifk	91	82.609	ENSCGRG00001016466	Nifk	100	66.462	Cricetulus_griseus_chok1gshd
ENSMUSG00000026377	Nifk	85	60.465	ENSCSEG00000015419	nifk	85	41.581	Cynoglossus_semilaevis
ENSMUSG00000026377	Nifk	97	56.122	ENSCVAG00000018411	nifk	73	40.141	Cyprinodon_variegatus
ENSMUSG00000026377	Nifk	94	55.000	ENSDARG00000040666	nifk	94	52.941	Danio_rerio
ENSMUSG00000026377	Nifk	88	68.539	ENSDNOG00000046092	-	99	50.470	Dasypus_novemcinctus
ENSMUSG00000026377	Nifk	88	69.663	ENSDNOG00000005017	-	100	52.188	Dasypus_novemcinctus
ENSMUSG00000026377	Nifk	92	53.763	ENSEBUG00000006979	nifk	68	50.345	Eptatretus_burgeri
ENSMUSG00000026377	Nifk	94	66.316	ENSEASG00005004772	NIFK	78	64.583	Equus_asinus_asinus
ENSMUSG00000026377	Nifk	94	66.316	ENSECAG00000018478	NIFK	100	52.516	Equus_caballus
ENSMUSG00000026377	Nifk	94	74.737	ENSEEUG00000008535	-	93	59.817	Erinaceus_europaeus
ENSMUSG00000026377	Nifk	85	61.628	ENSELUG00000007718	nifk	81	42.456	Esox_lucius
ENSMUSG00000026377	Nifk	94	70.526	ENSFCAG00000010787	NIFK	99	54.747	Felis_catus
ENSMUSG00000026377	Nifk	87	59.091	ENSFALG00000013238	NIFK	93	44.485	Ficedula_albicollis
ENSMUSG00000026377	Nifk	99	68.000	ENSFDAG00000021146	NIFK	100	54.890	Fukomys_damarensis
ENSMUSG00000026377	Nifk	88	60.674	ENSFHEG00000020455	nifk	84	39.721	Fundulus_heteroclitus
ENSMUSG00000026377	Nifk	84	58.824	ENSGMOG00000003166	nifk	99	44.027	Gadus_morhua
ENSMUSG00000026377	Nifk	87	64.773	ENSGALG00000011650	NIFK	95	43.492	Gallus_gallus
ENSMUSG00000026377	Nifk	81	63.415	ENSGAFG00000011462	nifk	82	39.437	Gambusia_affinis
ENSMUSG00000026377	Nifk	94	53.684	ENSGACG00000001551	nifk	96	41.748	Gasterosteus_aculeatus
ENSMUSG00000026377	Nifk	84	69.412	ENSGGOG00000025617	-	99	42.173	Gorilla_gorilla
ENSMUSG00000026377	Nifk	91	73.913	ENSGGOG00000023498	NIFK	100	55.486	Gorilla_gorilla
ENSMUSG00000026377	Nifk	97	43.087	ENSGGOG00000041210	-	98	43.087	Gorilla_gorilla
ENSMUSG00000026377	Nifk	88	59.551	ENSHBUG00000001209	nifk	86	39.863	Haplochromis_burtoni
ENSMUSG00000026377	Nifk	91	73.913	ENSHGLG00000008673	NIFK	100	55.521	Heterocephalus_glaber_female
ENSMUSG00000026377	Nifk	91	73.913	ENSHGLG00100003651	NIFK	100	55.762	Heterocephalus_glaber_male
ENSMUSG00000026377	Nifk	87	59.091	ENSHCOG00000007721	nifk	85	40.878	Hippocampus_comes
ENSMUSG00000026377	Nifk	84	63.529	ENSIPUG00000023690	nifk	82	42.373	Ictalurus_punctatus
ENSMUSG00000026377	Nifk	91	73.913	ENSSTOG00000026392	NIFK	97	54.984	Ictidomys_tridecemlineatus
ENSMUSG00000026377	Nifk	94	65.263	ENSJJAG00000008547	Nifk	100	55.762	Jaculus_jaculus
ENSMUSG00000026377	Nifk	85	59.302	ENSKMAG00000005871	nifk	88	39.931	Kryptolebias_marmoratus
ENSMUSG00000026377	Nifk	94	57.426	ENSLBEG00000003213	nifk	82	43.816	Labrus_bergylta
ENSMUSG00000026377	Nifk	94	57.426	ENSLBEG00000027125	nifk	82	43.816	Labrus_bergylta
ENSMUSG00000026377	Nifk	97	57.143	ENSLOCG00000002155	nifk	96	42.177	Lepisosteus_oculatus
ENSMUSG00000026377	Nifk	99	64.000	ENSLAFG00000030731	NIFK	100	53.251	Loxodonta_africana
ENSMUSG00000026377	Nifk	91	75.000	ENSMFAG00000031270	NIFK	100	55.172	Macaca_fascicularis
ENSMUSG00000026377	Nifk	91	75.000	ENSMMUG00000020928	NIFK	100	55.172	Macaca_mulatta
ENSMUSG00000026377	Nifk	91	75.000	ENSMNEG00000035940	NIFK	100	55.172	Macaca_nemestrina
ENSMUSG00000026377	Nifk	85	61.628	ENSMAMG00000008963	nifk	86	42.361	Mastacembelus_armatus
ENSMUSG00000026377	Nifk	88	59.551	ENSMZEG00005013057	nifk	86	39.863	Maylandia_zebra
ENSMUSG00000026377	Nifk	86	64.368	ENSMGAG00000011953	NIFK	94	43.377	Meleagris_gallopavo
ENSMUSG00000026377	Nifk	91	81.522	ENSMAUG00000021255	Nifk	100	68.727	Mesocricetus_auratus
ENSMUSG00000026377	Nifk	99	70.000	ENSMICG00000037600	NIFK	99	53.481	Microcebus_murinus
ENSMUSG00000026377	Nifk	84	80.000	ENSMOCG00000001962	Nifk	99	60.252	Microtus_ochrogaster
ENSMUSG00000026377	Nifk	88	57.303	ENSMMOG00000019220	nifk	77	36.842	Mola_mola
ENSMUSG00000026377	Nifk	96	61.856	ENSMODG00000008447	-	86	47.414	Monodelphis_domestica
ENSMUSG00000026377	Nifk	96	64.948	ENSMODG00000000152	-	89	48.852	Monodelphis_domestica
ENSMUSG00000026377	Nifk	88	60.674	ENSMALG00000008759	nifk	83	42.553	Monopterus_albus
ENSMUSG00000026377	Nifk	100	97.030	MGP_CAROLIEiJ_G0014507	Nifk	100	97.030	Mus_caroli
ENSMUSG00000026377	Nifk	100	93.069	MGP_PahariEiJ_G0027743	Nifk	100	93.069	Mus_pahari
ENSMUSG00000026377	Nifk	100	100.000	MGP_SPRETEiJ_G0015314	Nifk	100	100.000	Mus_spretus
ENSMUSG00000026377	Nifk	94	68.421	ENSMPUG00000001052	NIFK	100	54.829	Mustela_putorius_furo
ENSMUSG00000026377	Nifk	84	72.941	ENSMLUG00000006481	NIFK	99	53.797	Myotis_lucifugus
ENSMUSG00000026377	Nifk	94	73.684	ENSNGAG00000014831	Nifk	100	63.569	Nannospalax_galili
ENSMUSG00000026377	Nifk	88	59.551	ENSNBRG00000011444	nifk	86	39.519	Neolamprologus_brichardi
ENSMUSG00000026377	Nifk	99	62.000	ENSNLEG00000028987	-	92	43.046	Nomascus_leucogenys
ENSMUSG00000026377	Nifk	91	73.913	ENSNLEG00000001163	NIFK	100	56.113	Nomascus_leucogenys
ENSMUSG00000026377	Nifk	91	70.652	ENSODEG00000006240	-	99	55.380	Octodon_degus
ENSMUSG00000026377	Nifk	88	59.551	ENSONIG00000007903	nifk	85	39.863	Oreochromis_niloticus
ENSMUSG00000026377	Nifk	85	66.279	ENSOANG00000007522	-	98	53.137	Ornithorhynchus_anatinus
ENSMUSG00000026377	Nifk	91	72.826	ENSOCUG00000007451	-	99	55.911	Oryctolagus_cuniculus
ENSMUSG00000026377	Nifk	94	59.794	ENSOMEG00000018272	nifk	98	41.694	Oryzias_melastigma
ENSMUSG00000026377	Nifk	91	75.000	ENSOGAG00000016968	NIFK	97	55.839	Otolemur_garnettii
ENSMUSG00000026377	Nifk	94	65.263	ENSOARG00000013327	NIFK	99	54.890	Ovis_aries
ENSMUSG00000026377	Nifk	99	61.000	ENSPPAG00000033086	-	98	42.361	Pan_paniscus
ENSMUSG00000026377	Nifk	91	72.826	ENSPPAG00000034981	NIFK	100	55.172	Pan_paniscus
ENSMUSG00000026377	Nifk	75	68.421	ENSPPAG00000028694	-	98	42.444	Pan_paniscus
ENSMUSG00000026377	Nifk	91	72.826	ENSPPAG00000040912	-	84	58.784	Pan_paniscus
ENSMUSG00000026377	Nifk	94	70.526	ENSPPRG00000006683	NIFK	99	56.013	Panthera_pardus
ENSMUSG00000026377	Nifk	94	71.579	ENSPTIG00000012086	NIFK	95	56.777	Panthera_tigris_altaica
ENSMUSG00000026377	Nifk	91	72.826	ENSPTRG00000049930	-	84	58.784	Pan_troglodytes
ENSMUSG00000026377	Nifk	91	72.826	ENSPTRG00000012419	NIFK	100	55.172	Pan_troglodytes
ENSMUSG00000026377	Nifk	99	61.000	ENSPTRG00000043623	-	98	42.361	Pan_troglodytes
ENSMUSG00000026377	Nifk	91	75.000	ENSPANG00000009239	NIFK	100	55.172	Papio_anubis
ENSMUSG00000026377	Nifk	93	59.574	ENSPKIG00000020011	nifk	86	40.940	Paramormyrops_kingsleyae
ENSMUSG00000026377	Nifk	94	56.436	ENSPMGG00000016653	nifk	87	41.877	Periophthalmus_magnuspinnatus
ENSMUSG00000026377	Nifk	94	81.053	ENSPEMG00000023356	Nifk	100	71.004	Peromyscus_maniculatus_bairdii
ENSMUSG00000026377	Nifk	82	61.446	ENSPMAG00000007316	nifk	92	48.333	Petromyzon_marinus
ENSMUSG00000026377	Nifk	88	59.551	ENSPFOG00000000517	nifk	86	40.493	Poecilia_formosa
ENSMUSG00000026377	Nifk	88	59.551	ENSPLAG00000015839	nifk	86	40.141	Poecilia_latipinna
ENSMUSG00000026377	Nifk	88	59.551	ENSPMEG00000008828	nifk	86	40.141	Poecilia_mexicana
ENSMUSG00000026377	Nifk	88	59.551	ENSPREG00000008485	nifk	87	40.141	Poecilia_reticulata
ENSMUSG00000026377	Nifk	95	67.708	ENSPPYG00000018557	-	99	54.459	Pongo_abelii
ENSMUSG00000026377	Nifk	90	73.626	ENSPPYG00000025875	-	98	57.971	Pongo_abelii
ENSMUSG00000026377	Nifk	99	56.061	ENSPCOG00000023378	NIFK	100	42.222	Propithecus_coquereli
ENSMUSG00000026377	Nifk	100	68.317	ENSPVAG00000016707	NIFK	99	55.486	Pteropus_vampyrus
ENSMUSG00000026377	Nifk	88	59.551	ENSPNYG00000016315	nifk	88	39.863	Pundamilia_nyererei
ENSMUSG00000026377	Nifk	84	61.176	ENSPNAG00000017902	nifk	89	41.115	Pygocentrus_nattereri
ENSMUSG00000026377	Nifk	90	91.209	ENSRNOG00000025701	Nifk	92	90.972	Rattus_norvegicus
ENSMUSG00000026377	Nifk	91	73.913	ENSRBIG00000035094	NIFK	100	55.799	Rhinopithecus_bieti
ENSMUSG00000026377	Nifk	91	73.913	ENSRROG00000039485	NIFK	100	55.799	Rhinopithecus_roxellana
ENSMUSG00000026377	Nifk	91	72.826	ENSSBOG00000033603	NIFK	98	53.918	Saimiri_boliviensis_boliviensis
ENSMUSG00000026377	Nifk	96	64.948	ENSSHAG00000011786	NIFK	93	48.534	Sarcophilus_harrisii
ENSMUSG00000026377	Nifk	91	57.609	ENSSFOG00015012070	nifk	80	40.940	Scleropages_formosus
ENSMUSG00000026377	Nifk	84	61.176	ENSSMAG00000001845	nifk	84	41.754	Scophthalmus_maximus
ENSMUSG00000026377	Nifk	97	54.082	ENSSDUG00000005813	nifk	86	42.069	Seriola_dumerili
ENSMUSG00000026377	Nifk	97	53.061	ENSSLDG00000003456	nifk	85	42.069	Seriola_lalandi_dorsalis
ENSMUSG00000026377	Nifk	91	60.870	ENSSARG00000006252	NIFK	81	63.946	Sorex_araneus
ENSMUSG00000026377	Nifk	85	60.465	ENSSPAG00000023399	nifk	96	45.525	Stegastes_partitus
ENSMUSG00000026377	Nifk	94	64.211	ENSSSCG00000015730	NIFK	100	52.500	Sus_scrofa
ENSMUSG00000026377	Nifk	57	72.414	ENSTGUG00000004461	NIFK	93	46.491	Taeniopygia_guttata
ENSMUSG00000026377	Nifk	97	56.122	ENSTRUG00000005206	nifk	81	42.553	Takifugu_rubripes
ENSMUSG00000026377	Nifk	85	62.791	ENSTNIG00000017831	nifk	89	44.106	Tetraodon_nigroviridis
ENSMUSG00000026377	Nifk	91	61.957	ENSTBEG00000001123	NIFK	99	52.215	Tupaia_belangeri
ENSMUSG00000026377	Nifk	94	66.316	ENSTTRG00000005849	NIFK	99	53.220	Tursiops_truncatus
ENSMUSG00000026377	Nifk	97	68.367	ENSUAMG00000021620	NIFK	99	55.660	Ursus_americanus
ENSMUSG00000026377	Nifk	74	73.333	ENSUMAG00000008522	NIFK	99	56.538	Ursus_maritimus
ENSMUSG00000026377	Nifk	94	66.316	ENSVPAG00000005847	NIFK	82	62.887	Vicugna_pacos
ENSMUSG00000026377	Nifk	92	73.118	ENSVVUG00000027544	NIFK	91	53.818	Vulpes_vulpes
ENSMUSG00000026377	Nifk	84	61.176	ENSXETG00000000839	nifk	59	56.250	Xenopus_tropicalis
ENSMUSG00000026377	Nifk	88	59.551	ENSXMAG00000023401	nifk	82	40.794	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000794	condensed nuclear chromosome	-	ISO	Component
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	11342549.	ISO	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005730	nucleolus	11342549.	ISO	Component
GO:0005737	cytoplasm	11342549.	ISO	Component