EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026413 (Gene tree)
Gene ID: 18772
Gene Symbol: Pkp1
Alias: -
Full Name: plakophilin 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 47813
Position: chr1: 135871395-135919207
Accession: 1328359
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000132793	-	696	-	-	- (aa)	-	-
ENSMUST00000027667	-	4669	-	ENSMUSP00000027667	728 (aa)	-	P97350
ENSMUST00000189805	-	2395	-	ENSMUSP00000140883	166 (aa)	-	A0A087WS37
ENSMUST00000163260	-	3023	-	ENSMUSP00000128418	728 (aa)	-	P97350

Gene Model

Click here to download ENSMUSG00000026413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026413's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	14673151.17535849.	IPI	Function
GO:0005521	lamin binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005886	plasma membrane	21873635.	IBA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005911	cell-cell junction	21873635.	IBA	Component
GO:0005913	cell-cell adherens junction	21873635.	IBA	Component
GO:0007043	cell-cell junction assembly	21873635.	IBA	Process
GO:0007155	cell adhesion	-	IEA	Process
GO:0010628	positive regulation of gene expression	-	ISO	Process
GO:0030054	cell junction	-	IEA	Component
GO:0030057	desmosome	18496566.	IDA	Component
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0045110	intermediate filament bundle assembly	21873635.	IBA	Process
GO:0045110	intermediate filament bundle assembly	-	ISO	Process
GO:0045296	cadherin binding	21873635.	IBA	Function
GO:0098609	cell-cell adhesion	21873635.	IBA	Process
GO:1902373	negative regulation of mRNA catabolic process	-	ISO	Process
GO:1990124	messenger ribonucleoprotein complex	-	ISO	Component