EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026427 (Gene tree)
Gene ID: 16865
Gene Symbol: Eif2d
Alias: D1Ertd5e|Lgtn
Full Name: eukaryotic translation initiation factor 2D
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 34478 bases
Position: chr1:131153181-131187658
Accession: 109342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000063894	SUI1	PF01253.22	3.7e-16	1	1
ENSMUSP00000108065	SUI1	PF01253.22	7.1e-15	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000068791	-	3316	XM_017318536	ENSMUSP00000067461	453 (aa)	XP_017174025	Q8C8I3
ENSMUST00000112446	-	2153	XM_006529165	ENSMUSP00000108065	552 (aa)	XP_006529228	E9PUG7
ENSMUST00000068805	-	2009	XM_017318526	ENSMUSP00000063894	570 (aa)	XP_017174015	Q61211
ENSMUST00000151874	-	3459	-	ENSMUSP00000138061	570 (aa)	-	Q61211
ENSMUST00000149119	-	2504	-	ENSMUSP00000137887	176 (aa)	-	M0QWK9
ENSMUST00000139468	-	1238	-	-	- (aa)	-	-
ENSMUST00000153651	-	739	-	-	- (aa)	-	-
ENSMUST00000131855	-	3465	XM_011247929	ENSMUSP00000137678	587 (aa)	XP_011246231	A0A0R4J298

Gene Model

Click here to download ENSMUSG00000026427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026427's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026427	Eif2d	100	80.961	ENSG00000143486	EIF2D	99	87.222	Homo_sapiens
ENSMUSG00000026427	Eif2d	100	56.376	ENSAPOG00000003524	eif2d	99	56.661	Acanthochromis_polyacanthus
ENSMUSG00000026427	Eif2d	100	79.658	ENSAMEG00000011880	EIF2D	99	79.658	Ailuropoda_melanoleuca
ENSMUSG00000026427	Eif2d	88	69.492	ENSACIG00000021785	eif2d	99	69.492	Amphilophus_citrinellus
ENSMUSG00000026427	Eif2d	100	57.068	ENSAOCG00000017584	eif2d	99	57.068	Amphiprion_ocellaris
ENSMUSG00000026427	Eif2d	100	58.059	ENSAPEG00000011347	eif2d	99	58.059	Amphiprion_percula
ENSMUSG00000026427	Eif2d	100	55.000	ENSATEG00000007580	eif2d	99	56.324	Anabas_testudineus
ENSMUSG00000026427	Eif2d	97	58.692	ENSAPLG00000014849	EIF2D	99	59.208	Anas_platyrhynchos
ENSMUSG00000026427	Eif2d	100	58.638	ENSACAG00000007724	EIF2D	99	58.970	Anolis_carolinensis
ENSMUSG00000026427	Eif2d	100	80.617	ENSANAG00000022240	EIF2D	99	86.667	Aotus_nancymaae
ENSMUSG00000026427	Eif2d	100	55.351	ENSACLG00000024604	eif2d	99	55.833	Astatotilapia_calliptera
ENSMUSG00000026427	Eif2d	100	52.759	ENSAMXG00000038035	eif2d	99	53.177	Astyanax_mexicanus
ENSMUSG00000026427	Eif2d	100	79.066	ENSBTAG00000010432	EIF2D	81	79.066	Bos_taurus
ENSMUSG00000026427	Eif2d	100	80.103	ENSCJAG00000018600	EIF2D	99	86.111	Callithrix_jacchus
ENSMUSG00000026427	Eif2d	99	78.435	ENSCAFG00000010261	EIF2D	99	78.559	Canis_familiaris
ENSMUSG00000026427	Eif2d	99	78.609	ENSCAFG00020004757	EIF2D	99	78.731	Canis_lupus_dingo
ENSMUSG00000026427	Eif2d	100	79.029	ENSCHIG00000009380	EIF2D	99	79.029	Capra_hircus
ENSMUSG00000026427	Eif2d	100	81.507	ENSTSYG00000007829	EIF2D	99	84.615	Carlito_syrichta
ENSMUSG00000026427	Eif2d	100	79.895	ENSCPOG00000008935	EIF2D	100	79.895	Cavia_porcellus
ENSMUSG00000026427	Eif2d	100	80.961	ENSCCAG00000026977	EIF2D	99	86.111	Cebus_capucinus
ENSMUSG00000026427	Eif2d	100	80.617	ENSCATG00000030190	EIF2D	99	86.667	Cercocebus_atys
ENSMUSG00000026427	Eif2d	100	80.420	ENSCLAG00000014401	EIF2D	99	80.420	Chinchilla_lanigera
ENSMUSG00000026427	Eif2d	100	80.961	ENSCSAG00000014939	EIF2D	99	80.961	Chlorocebus_sabaeus
ENSMUSG00000026427	Eif2d	91	84.112	ENSCHOG00000007330	EIF2D	90	84.112	Choloepus_hoffmanni
ENSMUSG00000026427	Eif2d	100	61.194	ENSCPBG00000001908	EIF2D	99	61.667	Chrysemys_picta_bellii
ENSMUSG00000026427	Eif2d	100	36.319	ENSCING00000000226	-	99	36.808	Ciona_intestinalis
ENSMUSG00000026427	Eif2d	100	37.252	ENSCSAVG00000005731	-	99	37.252	Ciona_savignyi
ENSMUSG00000026427	Eif2d	100	76.672	ENSCANG00000033926	EIF2D	99	76.672	Colobus_angolensis_palliatus
ENSMUSG00000026427	Eif2d	100	90.559	ENSCGRG00001019105	Eif2d	100	90.559	Cricetulus_griseus_chok1gshd
ENSMUSG00000026427	Eif2d	100	90.559	ENSCGRG00000014164	Eif2d	100	90.559	Cricetulus_griseus_crigri
ENSMUSG00000026427	Eif2d	100	53.413	ENSCSEG00000021328	eif2d	99	54.669	Cynoglossus_semilaevis
ENSMUSG00000026427	Eif2d	100	55.000	ENSCVAG00000016064	eif2d	99	55.000	Cyprinodon_variegatus
ENSMUSG00000026427	Eif2d	100	55.481	ENSDARG00000012929	eif2d	99	55.763	Danio_rerio
ENSMUSG00000026427	Eif2d	100	68.020	ENSDNOG00000009251	-	99	68.128	Dasypus_novemcinctus
ENSMUSG00000026427	Eif2d	100	80.870	ENSDORG00000012925	Eif2d	99	80.870	Dipodomys_ordii
ENSMUSG00000026427	Eif2d	99	33.733	FBgn0041588	eIF2D	99	34.068	Drosophila_melanogaster
ENSMUSG00000026427	Eif2d	100	76.370	ENSETEG00000015298	EIF2D	99	76.370	Echinops_telfairi
ENSMUSG00000026427	Eif2d	100	43.669	ENSEBUG00000011079	eif2d	100	43.344	Eptatretus_burgeri
ENSMUSG00000026427	Eif2d	100	81.250	ENSEASG00005004921	EIF2D	99	81.250	Equus_asinus_asinus
ENSMUSG00000026427	Eif2d	100	79.966	ENSECAG00000000127	EIF2D	80	80.479	Equus_caballus
ENSMUSG00000026427	Eif2d	100	53.884	ENSELUG00000001790	eif2d	99	54.333	Esox_lucius
ENSMUSG00000026427	Eif2d	100	75.556	ENSFCAG00000013786	-	99	81.229	Felis_catus
ENSMUSG00000026427	Eif2d	100	79.791	ENSFDAG00000011373	EIF2D	100	79.791	Fukomys_damarensis
ENSMUSG00000026427	Eif2d	100	56.187	ENSFHEG00000003474	eif2d	99	56.566	Fundulus_heteroclitus
ENSMUSG00000026427	Eif2d	100	54.483	ENSGMOG00000016667	eif2d	100	54.828	Gadus_morhua
ENSMUSG00000026427	Eif2d	100	60.267	ENSGALG00000000856	EIF2D	99	60.768	Gallus_gallus
ENSMUSG00000026427	Eif2d	100	54.286	ENSGAFG00000021062	eif2d	99	54.286	Gambusia_affinis
ENSMUSG00000026427	Eif2d	100	53.923	ENSGACG00000002815	eif2d	100	53.783	Gasterosteus_aculeatus
ENSMUSG00000026427	Eif2d	100	62.833	ENSGAGG00000010058	EIF2D	99	62.833	Gopherus_agassizii
ENSMUSG00000026427	Eif2d	100	81.132	ENSGGOG00000015270	EIF2D	99	87.222	Gorilla_gorilla
ENSMUSG00000026427	Eif2d	100	55.351	ENSHBUG00000006298	eif2d	99	55.833	Haplochromis_burtoni
ENSMUSG00000026427	Eif2d	100	78.276	ENSHGLG00000008498	EIF2D	100	78.276	Heterocephalus_glaber_female
ENSMUSG00000026427	Eif2d	100	79.407	ENSHGLG00100006825	EIF2D	100	79.407	Heterocephalus_glaber_male
ENSMUSG00000026427	Eif2d	86	68.452	ENSHCOG00000009140	eif2d	95	68.452	Hippocampus_comes
ENSMUSG00000026427	Eif2d	100	55.782	ENSIPUG00000012330	eif2d	99	55.688	Ictalurus_punctatus
ENSMUSG00000026427	Eif2d	100	82.414	ENSSTOG00000006329	EIF2D	99	82.414	Ictidomys_tridecemlineatus
ENSMUSG00000026427	Eif2d	100	54.866	ENSKMAG00000016689	eif2d	99	55.034	Kryptolebias_marmoratus
ENSMUSG00000026427	Eif2d	100	54.409	ENSLBEG00000009691	eif2d	99	54.726	Labrus_bergylta
ENSMUSG00000026427	Eif2d	100	57.647	ENSLACG00000008651	EIF2D	99	57.647	Latimeria_chalumnae
ENSMUSG00000026427	Eif2d	100	56.833	ENSLOCG00000012230	eif2d	99	56.811	Lepisosteus_oculatus
ENSMUSG00000026427	Eif2d	100	78.276	ENSLAFG00000000517	EIF2D	99	78.276	Loxodonta_africana
ENSMUSG00000026427	Eif2d	100	81.132	ENSMFAG00000033925	EIF2D	99	86.667	Macaca_fascicularis
ENSMUSG00000026427	Eif2d	100	81.132	ENSMMUG00000002528	EIF2D	99	86.667	Macaca_mulatta
ENSMUSG00000026427	Eif2d	100	80.961	ENSMNEG00000028643	EIF2D	99	86.111	Macaca_nemestrina
ENSMUSG00000026427	Eif2d	100	80.961	ENSMLEG00000030616	EIF2D	99	86.667	Mandrillus_leucophaeus
ENSMUSG00000026427	Eif2d	100	55.041	ENSMAMG00000012055	eif2d	99	55.537	Mastacembelus_armatus
ENSMUSG00000026427	Eif2d	100	55.518	ENSMZEG00005023738	eif2d	99	56.260	Maylandia_zebra
ENSMUSG00000026427	Eif2d	100	58.833	ENSMGAG00000003648	EIF2D	99	59.333	Meleagris_gallopavo
ENSMUSG00000026427	Eif2d	100	89.161	ENSMAUG00000008390	Eif2d	100	89.161	Mesocricetus_auratus
ENSMUSG00000026427	Eif2d	100	80.993	ENSMICG00000017696	EIF2D	99	86.667	Microcebus_murinus
ENSMUSG00000026427	Eif2d	100	90.210	ENSMOCG00000015872	Eif2d	100	90.210	Microtus_ochrogaster
ENSMUSG00000026427	Eif2d	100	55.518	ENSMMOG00000020867	eif2d	99	55.518	Mola_mola
ENSMUSG00000026427	Eif2d	87	66.994	ENSMODG00000002070	EIF2D	99	66.994	Monodelphis_domestica
ENSMUSG00000026427	Eif2d	100	54.530	ENSMALG00000020271	eif2d	99	54.806	Monopterus_albus
ENSMUSG00000026427	Eif2d	100	98.188	MGP_CAROLIEiJ_G0014568	Eif2d	100	98.188	Mus_caroli
ENSMUSG00000026427	Eif2d	100	96.667	MGP_PahariEiJ_G0027802	Eif2d	100	96.667	Mus_pahari
ENSMUSG00000026427	Eif2d	100	99.825	MGP_SPRETEiJ_G0015372	Eif2d	100	99.825	Mus_spretus
ENSMUSG00000026427	Eif2d	100	77.436	ENSMPUG00000012089	EIF2D	99	77.436	Mustela_putorius_furo
ENSMUSG00000026427	Eif2d	100	79.623	ENSMLUG00000001410	-	99	79.281	Myotis_lucifugus
ENSMUSG00000026427	Eif2d	100	78.425	ENSMLUG00000013479	-	99	78.425	Myotis_lucifugus
ENSMUSG00000026427	Eif2d	100	86.014	ENSNGAG00000017892	Eif2d	99	86.014	Nannospalax_galili
ENSMUSG00000026427	Eif2d	100	55.686	ENSNBRG00000017231	eif2d	99	56.167	Neolamprologus_brichardi
ENSMUSG00000026427	Eif2d	100	81.304	ENSNLEG00000000648	EIF2D	99	87.222	Nomascus_leucogenys
ENSMUSG00000026427	Eif2d	100	71.306	ENSMEUG00000008777	EIF2D	99	71.306	Notamacropus_eugenii
ENSMUSG00000026427	Eif2d	86	78.947	ENSOPRG00000000585	EIF2D	86	78.947	Ochotona_princeps
ENSMUSG00000026427	Eif2d	100	80.348	ENSODEG00000005533	EIF2D	100	80.348	Octodon_degus
ENSMUSG00000026427	Eif2d	99	55.746	ENSONIG00000017293	eif2d	99	56.007	Oreochromis_niloticus
ENSMUSG00000026427	Eif2d	86	56.522	ENSOANG00000002339	EIF2D	99	56.522	Ornithorhynchus_anatinus
ENSMUSG00000026427	Eif2d	100	79.756	ENSOCUG00000015451	EIF2D	99	79.756	Oryctolagus_cuniculus
ENSMUSG00000026427	Eif2d	100	54.606	ENSORLG00000010491	eif2d	99	54.606	Oryzias_latipes
ENSMUSG00000026427	Eif2d	100	54.104	ENSORLG00020021017	eif2d	99	54.104	Oryzias_latipes_hni
ENSMUSG00000026427	Eif2d	100	54.606	ENSORLG00015016577	eif2d	99	54.606	Oryzias_latipes_hsok
ENSMUSG00000026427	Eif2d	100	53.807	ENSOMEG00000010533	eif2d	99	54.669	Oryzias_melastigma
ENSMUSG00000026427	Eif2d	100	81.507	ENSOGAG00000010156	EIF2D	99	81.507	Otolemur_garnettii
ENSMUSG00000026427	Eif2d	100	79.310	ENSOARG00000005917	EIF2D	99	79.310	Ovis_aries
ENSMUSG00000026427	Eif2d	100	81.304	ENSPPAG00000034016	EIF2D	99	81.304	Pan_paniscus
ENSMUSG00000026427	Eif2d	100	79.931	ENSPPRG00000010958	EIF2D	99	84.444	Panthera_pardus
ENSMUSG00000026427	Eif2d	85	79.000	ENSPTIG00000012728	EIF2D	99	82.474	Panthera_tigris_altaica
ENSMUSG00000026427	Eif2d	100	81.132	ENSPTRG00000001913	EIF2D	99	86.667	Pan_troglodytes
ENSMUSG00000026427	Eif2d	100	80.961	ENSPANG00000012287	EIF2D	99	86.667	Papio_anubis
ENSMUSG00000026427	Eif2d	100	56.661	ENSPKIG00000012100	eif2d	99	56.661	Paramormyrops_kingsleyae
ENSMUSG00000026427	Eif2d	100	60.099	ENSPSIG00000003547	EIF2D	99	60.791	Pelodiscus_sinensis
ENSMUSG00000026427	Eif2d	100	54.252	ENSPMGG00000011913	eif2d	99	54.252	Periophthalmus_magnuspinnatus
ENSMUSG00000026427	Eif2d	100	90.035	ENSPEMG00000010082	Eif2d	100	90.035	Peromyscus_maniculatus_bairdii
ENSMUSG00000026427	Eif2d	100	71.649	ENSPCIG00000001093	EIF2D	99	71.649	Phascolarctos_cinereus
ENSMUSG00000026427	Eif2d	99	52.843	ENSPFOG00000012940	eif2d	99	53.177	Poecilia_formosa
ENSMUSG00000026427	Eif2d	100	55.575	ENSPLAG00000019930	eif2d	99	55.575	Poecilia_latipinna
ENSMUSG00000026427	Eif2d	100	52.912	ENSPMEG00000007895	eif2d	99	53.245	Poecilia_mexicana
ENSMUSG00000026427	Eif2d	100	53.566	ENSPREG00000015967	eif2d	99	53.731	Poecilia_reticulata
ENSMUSG00000026427	Eif2d	100	81.475	ENSPPYG00000000285	EIF2D	99	81.475	Pongo_abelii
ENSMUSG00000026427	Eif2d	100	70.205	ENSPCAG00000010685	EIF2D	99	70.205	Procavia_capensis
ENSMUSG00000026427	Eif2d	100	81.164	ENSPCOG00000028365	EIF2D	99	87.778	Propithecus_coquereli
ENSMUSG00000026427	Eif2d	100	78.425	ENSPVAG00000008053	EIF2D	99	79.281	Pteropus_vampyrus
ENSMUSG00000026427	Eif2d	100	45.280	ENSPNYG00000004459	eif2d	78	60.638	Pundamilia_nyererei
ENSMUSG00000026427	Eif2d	100	53.500	ENSPNAG00000000143	eif2d	99	53.833	Pygocentrus_nattereri
ENSMUSG00000026427	Eif2d	100	93.158	ENSRNOG00000004910	Eif2d	100	93.158	Rattus_norvegicus
ENSMUSG00000026427	Eif2d	100	81.132	ENSRBIG00000011644	EIF2D	99	85.165	Rhinopithecus_bieti
ENSMUSG00000026427	Eif2d	100	81.132	ENSRROG00000034152	EIF2D	99	85.165	Rhinopithecus_roxellana
ENSMUSG00000026427	Eif2d	100	80.617	ENSSBOG00000018387	EIF2D	99	85.165	Saimiri_boliviensis_boliviensis
ENSMUSG00000026427	Eif2d	99	60.172	ENSSHAG00000016470	-	99	60.172	Sarcophilus_harrisii
ENSMUSG00000026427	Eif2d	100	71.649	ENSSHAG00000017769	-	99	71.649	Sarcophilus_harrisii
ENSMUSG00000026427	Eif2d	100	55.987	ENSSFOG00015014988	eif2d	99	55.987	Scleropages_formosus
ENSMUSG00000026427	Eif2d	100	54.229	ENSSMAG00000010879	eif2d	99	54.377	Scophthalmus_maximus
ENSMUSG00000026427	Eif2d	100	54.849	ENSSDUG00000014517	eif2d	99	55.201	Seriola_dumerili
ENSMUSG00000026427	Eif2d	100	54.515	ENSSLDG00000006671	eif2d	99	54.866	Seriola_lalandi_dorsalis
ENSMUSG00000026427	Eif2d	85	71.111	ENSSARG00000012911	EIF2D	99	71.111	Sorex_araneus
ENSMUSG00000026427	Eif2d	100	62.375	ENSSPUG00000008418	EIF2D	99	62.375	Sphenodon_punctatus
ENSMUSG00000026427	Eif2d	100	56.471	ENSSPAG00000002966	eif2d	99	56.853	Stegastes_partitus
ENSMUSG00000026427	Eif2d	100	79.110	ENSSSCG00000015648	EIF2D	97	79.966	Sus_scrofa
ENSMUSG00000026427	Eif2d	97	60.708	ENSTGUG00000001092	EIF2D	99	60.708	Taeniopygia_guttata
ENSMUSG00000026427	Eif2d	100	56.771	ENSTRUG00000012383	eif2d	99	56.239	Takifugu_rubripes
ENSMUSG00000026427	Eif2d	100	54.992	ENSTNIG00000017906	eif2d	99	54.992	Tetraodon_nigroviridis
ENSMUSG00000026427	Eif2d	74	92.105	ENSTBEG00000017584	EIF2D	72	92.105	Tupaia_belangeri
ENSMUSG00000026427	Eif2d	100	74.614	ENSTTRG00000012099	EIF2D	99	75.300	Tursiops_truncatus
ENSMUSG00000026427	Eif2d	100	78.632	ENSUAMG00000022745	EIF2D	99	78.632	Ursus_americanus
ENSMUSG00000026427	Eif2d	100	70.833	ENSUMAG00000004182	EIF2D	99	76.877	Ursus_maritimus
ENSMUSG00000026427	Eif2d	64	89.831	ENSVPAG00000007046	EIF2D	67	87.500	Vicugna_pacos
ENSMUSG00000026427	Eif2d	99	79.407	ENSVVUG00000013525	EIF2D	99	79.518	Vulpes_vulpes
ENSMUSG00000026427	Eif2d	100	56.176	ENSXETG00000023678	eif2d	99	56.176	Xenopus_tropicalis
ENSMUSG00000026427	Eif2d	100	53.109	ENSXCOG00000011402	eif2d	99	54.622	Xiphophorus_couchianus
ENSMUSG00000026427	Eif2d	99	53.613	ENSXMAG00000014696	eif2d	99	54.118	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001731	formation of translation preinitiation complex	21873635.	IBA	Process
GO:0001731	formation of translation preinitiation complex	-	ISO	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0003743	translation initiation factor activity	21873635.	IBA	Function
GO:0003743	translation initiation factor activity	-	ISO	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006412	translation	-	IEA	Process
GO:0006413	translational initiation	-	IEA	Process
GO:0016604	nuclear body	-	ISO	Component
GO:0022627	cytosolic small ribosomal subunit	21873635.	IBA	Component
GO:0022627	cytosolic small ribosomal subunit	-	ISO	Component
GO:0032790	ribosome disassembly	-	ISO	Process
GO:0075522	IRES-dependent viral translational initiation	-	ISO	Process