EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026434 (Gene tree)
Gene ID: 98415
Gene Symbol: Nucks1
Alias: 2700010L10Rik|8430423A01Rik|Nucks
Full Name: nuclear casein kinase and cyclin-dependent kinase substrate 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 25788
Position: chr1: 131910534-131936321
Accession: 1934811
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000189946	-	2375	-	ENSMUSP00000140818	233 (aa)	-	A0A087WRY3
ENSMUST00000187405	-	909	-	-	- (aa)	-	-
ENSMUST00000062264	-	5998	-	ENSMUSP00000062576	234 (aa)	-	Q80XU3

Gene Model

Click here to download ENSMUSG00000026434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026434's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026434	Nucks1	100	90.947	ENSG00000069275	NUCKS1	100	92.181	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000724	double-strand break repair via homologous recombination	-	ISO	Process
GO:0000785	chromatin	26205492.	IDA	Component
GO:0000790	nuclear chromatin	-	ISO	Component
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	24931609.	IDA	Function
GO:0001678	cellular glucose homeostasis	26205492.	IMP	Process
GO:0003682	chromatin binding	-	ISO	Function
GO:0003690	double-stranded DNA binding	-	ISO	Function
GO:0003697	single-stranded DNA binding	-	ISO	Function
GO:0005634	nucleus	3000779.11298763.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	3000779.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006275	regulation of DNA replication	-	ISO	Process
GO:0006325	chromatin organization	24931609.26205492.	IMP	Process
GO:0006357	regulation of transcription by RNA polymerase II	26205492.	IC	Process
GO:0008134	transcription factor binding	-	ISO	Function
GO:0019046	release from viral latency	-	ISO	Process
GO:0031297	replication fork processing	-	ISO	Process
GO:0036297	interstrand cross-link repair	-	ISO	Process
GO:0042593	glucose homeostasis	24931609.	IMP	Process
GO:0043923	positive regulation by host of viral transcription	-	ISO	Process
GO:0044829	positive regulation by host of viral genome replication	-	ISO	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	24931609.	IDA	Process
GO:0046626	regulation of insulin receptor signaling pathway	26205492.	IMP	Process
GO:0046628	positive regulation of insulin receptor signaling pathway	24931609.	IMP	Process
GO:0060382	regulation of DNA strand elongation	-	ISO	Process
GO:0071481	cellular response to X-ray	-	ISO	Process
GO:1990968	modulation by host of RNA binding by virus	-	ISO	Process
GO:1990969	modulation by host of viral RNA-binding transcription factor activity	-	ISO	Process