EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026478 (Gene tree)
Gene ID: 226519
Gene Symbol: Lamc1
Alias: Lamb2|laminin B2
Full Name: laminin%2C gamma 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 113865
Position: chr1: 153218922-153332786
Accession: 99914
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000163011	-	762	-	ENSMUSP00000124216	125 (aa)	-	F6TLW1
ENSMUST00000159251	-	924	-	-	- (aa)	-	-
ENSMUST00000161744	-	1447	-	ENSMUSP00000124662	104 (aa)	-	F6SFQ3
ENSMUST00000027752	-	7622	-	ENSMUSP00000027752	1607 (aa)	-	F8VQJ3
ENSMUST00000160515	-	466	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000026478's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04151	PI3K-Akt signaling pathway	KEGG
mmu04510	Focal adhesion	KEGG
mmu04512	ECM-receptor interaction	KEGG
mmu05020	Prion diseases	KEGG
mmu05145	Toxoplasmosis	KEGG
mmu05146	Amoebiasis	KEGG
mmu05165	Human papillomavirus infection	KEGG
mmu05200	Pathways in cancer	KEGG
mmu05222	Small cell lung cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026478's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005201	extracellular matrix structural constituent	22159717.28071719.	IEA	Function
GO:0005201	extracellular matrix structural constituent	-	ISO	Function
GO:0005201	extracellular matrix structural constituent	22159717.28071719.	RCA	Function
GO:0005515	protein binding	12243745.12743034.12931195.19193855.21311558.23948589.	IPI	Function
GO:0005576	extracellular region	-	IEA	Component
GO:0005604	basement membrane	1292752.7670489.9396756.12051813.12743034.15895400.18757743.	IDA	Component
GO:0005604	basement membrane	9264260.	IDA	Component
GO:0005604	basement membrane	-	ISO	Component
GO:0005606	laminin-1 complex	-	ISO	Component
GO:0005615	extracellular space	24006456.	HDA	Component
GO:0007155	cell adhesion	-	ISO	Process
GO:0016477	cell migration	-	ISO	Process
GO:0022617	extracellular matrix disassembly	-	ISO	Process
GO:0031012	extracellular matrix	-	ISO	Component
GO:0031175	neuron projection development	19118221.	IDA	Process
GO:0031581	hemidesmosome assembly	-	ISO	Process
GO:0031594	neuromuscular junction	9396756.	IDA	Component
GO:0034446	substrate adhesion-dependent cell spreading	-	ISO	Process
GO:0043083	synaptic cleft	9396756.	IDA	Component
GO:0043208	glycosphingolipid binding	19118221.	IDA	Function
GO:0043259	laminin-10 complex	9299121.	IPI	Component
GO:0062023	collagen-containing extracellular matrix	22159717.28071719.	HDA	Component
GO:0062023	collagen-containing extracellular matrix	-	ISO	Component
GO:0065003	protein-containing complex assembly	-	ISO	Process