EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026492 (Gene tree)
Gene ID: 15278
Gene Symbol: Tfb2m
Alias: Hkp1
Full Name: transcription factor B2%2C mitochondrial
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 18213 bases
Position: chr1:179528055-179546267
Accession: 107937
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000027769	RrnaAD	PF00398.20	5.9e-20	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000027769	-	2449	XM_006496664	ENSMUSP00000027769	396 (aa)	XP_006496729	Q3TL26
ENSMUST00000139993	-	406	-	-	- (aa)	-	-
ENSMUST00000150778	-	458	-	-	- (aa)	-	-
ENSMUST00000129009	-	828	-	-	- (aa)	-	-
ENSMUST00000129982	-	986	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000026492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026492's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026492	Tfb2m	98	53.061	ENSG00000162851	TFB2M	99	53.061	Homo_sapiens
ENSMUSG00000026492	Tfb2m	82	37.612	ENSAPOG00000020846	tfb2m	73	37.612	Acanthochromis_polyacanthus
ENSMUSG00000026492	Tfb2m	99	48.883	ENSAMEG00000006593	TFB2M	99	48.883	Ailuropoda_melanoleuca
ENSMUSG00000026492	Tfb2m	82	38.872	ENSACIG00000008758	tfb2m	74	38.872	Amphilophus_citrinellus
ENSMUSG00000026492	Tfb2m	82	39.024	ENSAOCG00000008467	tfb2m	71	39.024	Amphiprion_ocellaris
ENSMUSG00000026492	Tfb2m	82	39.024	ENSAPEG00000004298	tfb2m	71	39.024	Amphiprion_percula
ENSMUSG00000026492	Tfb2m	78	38.907	ENSATEG00000020372	tfb2m	68	38.907	Anabas_testudineus
ENSMUSG00000026492	Tfb2m	81	47.222	ENSACAG00000011940	TFB2M	95	47.222	Anolis_carolinensis
ENSMUSG00000026492	Tfb2m	97	50.895	ENSANAG00000038040	TFB2M	97	50.895	Aotus_nancymaae
ENSMUSG00000026492	Tfb2m	82	37.879	ENSACLG00000009801	tfb2m	71	37.879	Astatotilapia_calliptera
ENSMUSG00000026492	Tfb2m	80	37.690	ENSAMXG00000001243	tfb2m	80	37.690	Astyanax_mexicanus
ENSMUSG00000026492	Tfb2m	98	50.510	ENSBTAG00000000072	TFB2M	98	50.510	Bos_taurus
ENSMUSG00000026492	Tfb2m	97	50.000	ENSCJAG00000016845	TFB2M	98	50.000	Callithrix_jacchus
ENSMUSG00000026492	Tfb2m	99	48.500	ENSCAFG00000032694	TFB2M	99	48.500	Canis_familiaris
ENSMUSG00000026492	Tfb2m	99	48.500	ENSCAFG00020001084	TFB2M	99	48.500	Canis_lupus_dingo
ENSMUSG00000026492	Tfb2m	98	51.020	ENSCHIG00000017458	TFB2M	98	51.020	Capra_hircus
ENSMUSG00000026492	Tfb2m	97	56.848	ENSTSYG00000010006	TFB2M	97	56.848	Carlito_syrichta
ENSMUSG00000026492	Tfb2m	99	44.332	ENSCPOG00000013225	-	99	44.332	Cavia_porcellus
ENSMUSG00000026492	Tfb2m	97	51.804	ENSCCAG00000028811	TFB2M	97	51.804	Cebus_capucinus
ENSMUSG00000026492	Tfb2m	92	45.479	ENSCATG00000043081	-	99	45.918	Cercocebus_atys
ENSMUSG00000026492	Tfb2m	99	48.092	ENSCATG00000041118	TFB2M	99	48.092	Cercocebus_atys
ENSMUSG00000026492	Tfb2m	99	47.236	ENSCLAG00000008614	TFB2M	99	47.236	Chinchilla_lanigera
ENSMUSG00000026492	Tfb2m	99	53.944	ENSCSAG00000009135	TFB2M	99	53.944	Chlorocebus_sabaeus
ENSMUSG00000026492	Tfb2m	97	50.129	ENSCHOG00000001296	TFB2M	98	50.129	Choloepus_hoffmanni
ENSMUSG00000026492	Tfb2m	86	42.978	ENSCPBG00000016975	TFB2M	86	42.978	Chrysemys_picta_bellii
ENSMUSG00000026492	Tfb2m	99	46.056	ENSCANG00000023198	-	99	46.056	Colobus_angolensis_palliatus
ENSMUSG00000026492	Tfb2m	99	71.970	ENSCGRG00001000953	Tfb2m	99	71.970	Cricetulus_griseus_chok1gshd
ENSMUSG00000026492	Tfb2m	99	71.970	ENSCGRG00000013379	Tfb2m	99	71.970	Cricetulus_griseus_crigri
ENSMUSG00000026492	Tfb2m	72	35.764	ENSCSEG00000008303	TFB2M	63	37.410	Cynoglossus_semilaevis
ENSMUSG00000026492	Tfb2m	81	36.747	ENSCVAG00000010328	tfb2m	73	36.747	Cyprinodon_variegatus
ENSMUSG00000026492	Tfb2m	85	39.412	ENSDARG00000074756	tfb2m	76	39.412	Danio_rerio
ENSMUSG00000026492	Tfb2m	99	54.478	ENSDNOG00000035182	TFB2M	99	54.478	Dasypus_novemcinctus
ENSMUSG00000026492	Tfb2m	99	54.798	ENSDORG00000026012	Tfb2m	99	54.798	Dipodomys_ordii
ENSMUSG00000026492	Tfb2m	85	43.323	ENSETEG00000007294	-	98	43.323	Echinops_telfairi
ENSMUSG00000026492	Tfb2m	99	57.215	ENSEASG00005005729	TFB2M	99	57.215	Equus_asinus_asinus
ENSMUSG00000026492	Tfb2m	99	57.722	ENSECAG00000016462	TFB2M	99	57.722	Equus_caballus
ENSMUSG00000026492	Tfb2m	84	41.716	ENSELUG00000002046	tfb2m	96	37.746	Esox_lucius
ENSMUSG00000026492	Tfb2m	97	50.646	ENSFCAG00000021951	TFB2M	99	50.646	Felis_catus
ENSMUSG00000026492	Tfb2m	80	42.056	ENSFALG00000011573	TFB2M	96	42.056	Ficedula_albicollis
ENSMUSG00000026492	Tfb2m	99	47.103	ENSFDAG00000005822	TFB2M	99	47.103	Fukomys_damarensis
ENSMUSG00000026492	Tfb2m	82	38.507	ENSFHEG00000019185	tfb2m	74	38.507	Fundulus_heteroclitus
ENSMUSG00000026492	Tfb2m	58	32.751	ENSGMOG00000013664	tfb2m	97	32.751	Gadus_morhua
ENSMUSG00000026492	Tfb2m	86	42.647	ENSGALG00000010651	TFB2M	84	42.647	Gallus_gallus
ENSMUSG00000026492	Tfb2m	82	38.053	ENSGAFG00000008503	tfb2m	74	38.053	Gambusia_affinis
ENSMUSG00000026492	Tfb2m	57	36.564	ENSGACG00000016236	tfb2m	96	36.564	Gasterosteus_aculeatus
ENSMUSG00000026492	Tfb2m	86	41.076	ENSGAGG00000023556	TFB2M	85	41.076	Gopherus_agassizii
ENSMUSG00000026492	Tfb2m	98	53.316	ENSGGOG00000001095	TFB2M	99	53.316	Gorilla_gorilla
ENSMUSG00000026492	Tfb2m	82	37.202	ENSHBUG00000000565	tfb2m	73	37.202	Haplochromis_burtoni
ENSMUSG00000026492	Tfb2m	99	48.737	ENSHGLG00000015476	-	99	48.737	Heterocephalus_glaber_female
ENSMUSG00000026492	Tfb2m	99	48.737	ENSHGLG00100004104	-	99	48.737	Heterocephalus_glaber_male
ENSMUSG00000026492	Tfb2m	81	37.576	ENSHCOG00000018851	tfb2m	71	37.576	Hippocampus_comes
ENSMUSG00000026492	Tfb2m	80	42.042	ENSIPUG00000015951	TFB2M	75	42.042	Ictalurus_punctatus
ENSMUSG00000026492	Tfb2m	99	54.545	ENSSTOG00000034162	TFB2M	100	54.545	Ictidomys_tridecemlineatus
ENSMUSG00000026492	Tfb2m	99	55.164	ENSJJAG00000019285	Tfb2m	99	55.164	Jaculus_jaculus
ENSMUSG00000026492	Tfb2m	81	37.349	ENSKMAG00000019736	tfb2m	74	37.349	Kryptolebias_marmoratus
ENSMUSG00000026492	Tfb2m	82	37.349	ENSLBEG00000003846	tfb2m	73	37.349	Labrus_bergylta
ENSMUSG00000026492	Tfb2m	61	40.741	ENSLACG00000016461	tfb2m	95	38.462	Latimeria_chalumnae
ENSMUSG00000026492	Tfb2m	82	43.119	ENSLOCG00000016646	tfb2m	78	43.119	Lepisosteus_oculatus
ENSMUSG00000026492	Tfb2m	97	54.822	ENSLAFG00000015061	TFB2M	98	54.822	Loxodonta_africana
ENSMUSG00000026492	Tfb2m	99	55.216	ENSMFAG00000000959	TFB2M	99	55.216	Macaca_fascicularis
ENSMUSG00000026492	Tfb2m	92	45.604	ENSMMUG00000041253	-	99	46.036	Macaca_mulatta
ENSMUSG00000026492	Tfb2m	99	54.453	ENSMMUG00000022915	TFB2M	99	54.453	Macaca_mulatta
ENSMUSG00000026492	Tfb2m	99	55.216	ENSMNEG00000034600	TFB2M	99	55.216	Macaca_nemestrina
ENSMUSG00000026492	Tfb2m	92	42.975	ENSMNEG00000045067	-	99	43.590	Macaca_nemestrina
ENSMUSG00000026492	Tfb2m	99	54.707	ENSMLEG00000031716	TFB2M	99	54.707	Mandrillus_leucophaeus
ENSMUSG00000026492	Tfb2m	82	37.538	ENSMAMG00000020525	tfb2m	67	37.538	Mastacembelus_armatus
ENSMUSG00000026492	Tfb2m	82	37.879	ENSMZEG00005010491	tfb2m	71	37.879	Maylandia_zebra
ENSMUSG00000026492	Tfb2m	73	44.178	ENSMGAG00000011408	TFB2M	98	44.178	Meleagris_gallopavo
ENSMUSG00000026492	Tfb2m	99	70.455	ENSMAUG00000015170	Tfb2m	99	70.455	Mesocricetus_auratus
ENSMUSG00000026492	Tfb2m	97	55.814	ENSMICG00000016790	TFB2M	97	55.814	Microcebus_murinus
ENSMUSG00000026492	Tfb2m	99	71.970	ENSMOCG00000016864	Tfb2m	99	71.970	Microtus_ochrogaster
ENSMUSG00000026492	Tfb2m	82	38.024	ENSMMOG00000001118	tfb2m	75	38.024	Mola_mola
ENSMUSG00000026492	Tfb2m	71	45.070	ENSMODG00000029299	-	97	45.070	Monodelphis_domestica
ENSMUSG00000026492	Tfb2m	79	39.432	ENSMALG00000007148	tfb2m	69	39.432	Monopterus_albus
ENSMUSG00000026492	Tfb2m	100	93.939	MGP_CAROLIEiJ_G0014966	-	100	93.939	Mus_caroli
ENSMUSG00000026492	Tfb2m	100	93.939	MGP_CAROLIEiJ_G0014967	-	100	93.939	Mus_caroli
ENSMUSG00000026492	Tfb2m	100	90.657	MGP_PahariEiJ_G0028197	-	100	90.657	Mus_pahari
ENSMUSG00000026492	Tfb2m	100	98.737	MGP_SPRETEiJ_G0015765	-	100	98.737	Mus_spretus
ENSMUSG00000026492	Tfb2m	99	49.250	ENSMPUG00000015810	TFB2M	99	49.250	Mustela_putorius_furo
ENSMUSG00000026492	Tfb2m	99	46.329	ENSMLUG00000003923	TFB2M	99	46.329	Myotis_lucifugus
ENSMUSG00000026492	Tfb2m	99	69.036	ENSNGAG00000018240	Tfb2m	99	69.036	Nannospalax_galili
ENSMUSG00000026492	Tfb2m	64	38.889	ENSNBRG00000003110	-	67	38.889	Neolamprologus_brichardi
ENSMUSG00000026492	Tfb2m	60	42.276	ENSNBRG00000000213	tfb2m	99	42.276	Neolamprologus_brichardi
ENSMUSG00000026492	Tfb2m	98	54.592	ENSNLEG00000004146	TFB2M	99	54.592	Nomascus_leucogenys
ENSMUSG00000026492	Tfb2m	99	48.250	ENSODEG00000013735	-	99	48.250	Octodon_degus
ENSMUSG00000026492	Tfb2m	82	37.798	ENSONIG00000017120	tfb2m	73	37.798	Oreochromis_niloticus
ENSMUSG00000026492	Tfb2m	76	45.333	ENSOANG00000010246	-	98	45.263	Ornithorhynchus_anatinus
ENSMUSG00000026492	Tfb2m	88	59.714	ENSOCUG00000022792	-	98	57.436	Oryctolagus_cuniculus
ENSMUSG00000026492	Tfb2m	92	59.673	ENSOCUG00000013727	-	98	58.974	Oryctolagus_cuniculus
ENSMUSG00000026492	Tfb2m	80	37.304	ENSORLG00000011263	tfb2m	56	37.304	Oryzias_latipes
ENSMUSG00000026492	Tfb2m	82	36.119	ENSORLG00020003041	tfb2m	73	36.119	Oryzias_latipes_hni
ENSMUSG00000026492	Tfb2m	82	36.716	ENSORLG00015001311	tfb2m	73	36.716	Oryzias_latipes_hsok
ENSMUSG00000026492	Tfb2m	81	36.937	ENSOMEG00000010814	tfb2m	72	36.937	Oryzias_melastigma
ENSMUSG00000026492	Tfb2m	100	54.774	ENSOGAG00000007823	TFB2M	100	54.774	Otolemur_garnettii
ENSMUSG00000026492	Tfb2m	76	51.176	ENSOARG00000020149	-	98	51.176	Ovis_aries
ENSMUSG00000026492	Tfb2m	98	51.786	ENSOARG00000004242	-	98	51.786	Ovis_aries
ENSMUSG00000026492	Tfb2m	98	53.316	ENSPPAG00000036577	TFB2M	99	53.316	Pan_paniscus
ENSMUSG00000026492	Tfb2m	97	50.773	ENSPPRG00000007350	TFB2M	99	50.773	Panthera_pardus
ENSMUSG00000026492	Tfb2m	97	50.258	ENSPTIG00000007649	TFB2M	99	50.258	Panthera_tigris_altaica
ENSMUSG00000026492	Tfb2m	98	53.316	ENSPTRG00000002188	TFB2M	99	53.316	Pan_troglodytes
ENSMUSG00000026492	Tfb2m	99	45.408	ENSPANG00000033033	-	99	45.408	Papio_anubis
ENSMUSG00000026492	Tfb2m	93	54.865	ENSPANG00000024989	TFB2M	86	54.865	Papio_anubis
ENSMUSG00000026492	Tfb2m	80	41.875	ENSPKIG00000007071	tfb2m	72	41.875	Paramormyrops_kingsleyae
ENSMUSG00000026492	Tfb2m	70	44.404	ENSPSIG00000005507	TFB2M	95	44.404	Pelodiscus_sinensis
ENSMUSG00000026492	Tfb2m	86	36.494	ENSPMGG00000002042	tfb2m	77	36.494	Periophthalmus_magnuspinnatus
ENSMUSG00000026492	Tfb2m	99	70.960	ENSPEMG00000018713	Tfb2m	99	70.960	Peromyscus_maniculatus_bairdii
ENSMUSG00000026492	Tfb2m	79	32.812	ENSPMAG00000007459	tfb2m	95	32.812	Petromyzon_marinus
ENSMUSG00000026492	Tfb2m	99	42.532	ENSPCIG00000003268	-	97	42.532	Phascolarctos_cinereus
ENSMUSG00000026492	Tfb2m	80	38.245	ENSPFOG00000010834	tfb2m	80	38.245	Poecilia_formosa
ENSMUSG00000026492	Tfb2m	80	36.991	ENSPLAG00000000382	tfb2m	69	36.991	Poecilia_latipinna
ENSMUSG00000026492	Tfb2m	80	38.245	ENSPMEG00000011437	tfb2m	69	38.245	Poecilia_mexicana
ENSMUSG00000026492	Tfb2m	83	37.462	ENSPREG00000010841	tfb2m	73	37.462	Poecilia_reticulata
ENSMUSG00000026492	Tfb2m	98	53.316	ENSPPYG00000000046	TFB2M	99	53.316	Pongo_abelii
ENSMUSG00000026492	Tfb2m	83	58.912	ENSPCAG00000014525	TFB2M	98	58.912	Procavia_capensis
ENSMUSG00000026492	Tfb2m	99	52.030	ENSPCOG00000017595	TFB2M	98	52.030	Propithecus_coquereli
ENSMUSG00000026492	Tfb2m	99	54.774	ENSPVAG00000000353	TFB2M	99	54.774	Pteropus_vampyrus
ENSMUSG00000026492	Tfb2m	81	37.425	ENSPNYG00000017560	tfb2m	72	37.425	Pundamilia_nyererei
ENSMUSG00000026492	Tfb2m	82	41.791	ENSPNAG00000006270	tfb2m	64	41.791	Pygocentrus_nattereri
ENSMUSG00000026492	Tfb2m	100	87.657	ENSRNOG00000002695	Tfb2m	100	87.657	Rattus_norvegicus
ENSMUSG00000026492	Tfb2m	99	43.038	ENSRBIG00000032518	-	99	43.038	Rhinopithecus_bieti
ENSMUSG00000026492	Tfb2m	99	54.453	ENSRBIG00000007430	TFB2M	99	54.453	Rhinopithecus_bieti
ENSMUSG00000026492	Tfb2m	99	54.198	ENSRROG00000011991	TFB2M	99	54.198	Rhinopithecus_roxellana
ENSMUSG00000026492	Tfb2m	97	48.969	ENSSBOG00000033950	TFB2M	97	48.969	Saimiri_boliviensis_boliviensis
ENSMUSG00000026492	Tfb2m	98	43.333	ENSSHAG00000010044	-	97	43.333	Sarcophilus_harrisii
ENSMUSG00000026492	Tfb2m	80	42.271	ENSSFOG00015019121	tfb2m	70	42.271	Scleropages_formosus
ENSMUSG00000026492	Tfb2m	78	44.127	ENSSFOG00015019107	tfb2m	70	44.127	Scleropages_formosus
ENSMUSG00000026492	Tfb2m	81	36.556	ENSSMAG00000005476	tfb2m	73	36.556	Scophthalmus_maximus
ENSMUSG00000026492	Tfb2m	82	37.126	ENSSDUG00000001650	tfb2m	74	37.126	Seriola_dumerili
ENSMUSG00000026492	Tfb2m	82	37.425	ENSSLDG00000024489	tfb2m	75	37.425	Seriola_lalandi_dorsalis
ENSMUSG00000026492	Tfb2m	85	51.775	ENSSARG00000003285	TFB2M	85	51.775	Sorex_araneus
ENSMUSG00000026492	Tfb2m	84	41.964	ENSSPUG00000011591	TFB2M	83	41.964	Sphenodon_punctatus
ENSMUSG00000026492	Tfb2m	82	39.169	ENSSPAG00000010535	tfb2m	73	39.169	Stegastes_partitus
ENSMUSG00000026492	Tfb2m	98	50.765	ENSSSCG00000023775	TFB2M	99	51.335	Sus_scrofa
ENSMUSG00000026492	Tfb2m	78	42.903	ENSTGUG00000008396	TFB2M	94	42.903	Taeniopygia_guttata
ENSMUSG00000026492	Tfb2m	82	35.135	ENSTRUG00000010411	tfb2m	74	35.135	Takifugu_rubripes
ENSMUSG00000026492	Tfb2m	82	37.615	ENSTNIG00000017700	tfb2m	99	37.615	Tetraodon_nigroviridis
ENSMUSG00000026492	Tfb2m	98	49.235	ENSTBEG00000008705	TFB2M	99	49.235	Tupaia_belangeri
ENSMUSG00000026492	Tfb2m	99	47.837	ENSTTRG00000005299	TFB2M	99	47.837	Tursiops_truncatus
ENSMUSG00000026492	Tfb2m	66	50.566	ENSUAMG00000009323	-	91	50.566	Ursus_americanus
ENSMUSG00000026492	Tfb2m	99	49.000	ENSUMAG00000013324	TFB2M	99	49.000	Ursus_maritimus
ENSMUSG00000026492	Tfb2m	94	54.667	ENSVPAG00000009586	TFB2M	99	54.847	Vicugna_pacos
ENSMUSG00000026492	Tfb2m	76	50.654	ENSVVUG00000000650	-	80	50.654	Vulpes_vulpes
ENSMUSG00000026492	Tfb2m	76	46.026	ENSXETG00000033343	TFB2M	82	46.026	Xenopus_tropicalis
ENSMUSG00000026492	Tfb2m	82	37.168	ENSXCOG00000012233	tfb2m	75	37.168	Xiphophorus_couchianus
ENSMUSG00000026492	Tfb2m	82	37.463	ENSXMAG00000017710	tfb2m	74	37.463	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000154	rRNA modification	-	IEA	Process
GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity	21873635.	IBA	Function
GO:0003712	transcription coregulator activity	-	ISO	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005759	mitochondrial matrix	21873635.	IBA	Component
GO:0005759	mitochondrial matrix	-	ISO	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0006364	rRNA processing	-	IEA	Process
GO:0006390	mitochondrial transcription	21873635.	IBA	Process
GO:0006390	mitochondrial transcription	-	ISO	Process
GO:0006391	transcription initiation from mitochondrial promoter	-	ISO	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0008649	rRNA methyltransferase activity	-	IEA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0031167	rRNA methylation	21873635.	IBA	Process
GO:0032259	methylation	-	IEA	Process
GO:0042645	mitochondrial nucleoid	-	ISO	Component
GO:0045893	positive regulation of transcription, DNA-templated	-	ISO	Process