EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026511 (Gene tree)
Gene ID: 27058
Gene Symbol: Srp9
Alias: 9kDa
Full Name: signal recognition particle 9
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 7671 bases
Position: chr1:182124737-182132407
Accession: 1350930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000027792	SRP9-21	PF05486.12	2.6e-12	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000027792	-	1367	-	ENSMUSP00000027792	86 (aa)	-	P49962
ENSMUST00000191799	-	3719	-	-	- (aa)	-	-
ENSMUST00000111018	-	823	-	ENSMUSP00000106647	63 (aa)	-	D3YZX8
ENSMUST00000193005	-	1107	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000026511's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026511's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026511	Srp9	100	93.023	ENSG00000143742	SRP9	100	93.023	Homo_sapiens
ENSMUSG00000026511	Srp9	100	76.744	ENSAPOG00000006089	srp9	100	76.744	Acanthochromis_polyacanthus
ENSMUSG00000026511	Srp9	100	91.860	ENSAMEG00000014744	SRP9	100	91.860	Ailuropoda_melanoleuca
ENSMUSG00000026511	Srp9	100	54.651	ENSACIG00000022298	srp9	100	54.651	Amphilophus_citrinellus
ENSMUSG00000026511	Srp9	100	76.744	ENSAOCG00000014643	srp9	100	76.744	Amphiprion_ocellaris
ENSMUSG00000026511	Srp9	100	76.744	ENSAPEG00000004398	srp9	100	76.744	Amphiprion_percula
ENSMUSG00000026511	Srp9	100	77.907	ENSATEG00000014339	srp9	100	77.907	Anabas_testudineus
ENSMUSG00000026511	Srp9	81	87.143	ENSAPLG00000015368	SRP9	100	87.143	Anas_platyrhynchos
ENSMUSG00000026511	Srp9	100	89.535	ENSACAG00000005788	SRP9	100	89.535	Anolis_carolinensis
ENSMUSG00000026511	Srp9	100	95.349	ENSANAG00000022626	SRP9	100	95.349	Aotus_nancymaae
ENSMUSG00000026511	Srp9	100	77.907	ENSACLG00000018392	srp9	100	77.907	Astatotilapia_calliptera
ENSMUSG00000026511	Srp9	100	77.907	ENSAMXG00000010366	srp9	100	77.907	Astyanax_mexicanus
ENSMUSG00000026511	Srp9	100	91.860	ENSBTAG00000033322	SRP9	100	91.860	Bos_taurus
ENSMUSG00000026511	Srp9	88	52.632	WBGene00013984	ZK512.4	100	52.632	Caenorhabditis_elegans
ENSMUSG00000026511	Srp9	100	95.349	ENSCJAG00000040095	SRP9	100	95.349	Callithrix_jacchus
ENSMUSG00000026511	Srp9	100	91.860	ENSCAFG00000016162	SRP9	100	91.860	Canis_familiaris
ENSMUSG00000026511	Srp9	100	91.860	ENSCAFG00020003285	SRP9	100	91.860	Canis_lupus_dingo
ENSMUSG00000026511	Srp9	100	91.860	ENSCHIG00000006407	SRP9	100	91.860	Capra_hircus
ENSMUSG00000026511	Srp9	100	89.535	ENSTSYG00000026832	SRP9	100	89.535	Carlito_syrichta
ENSMUSG00000026511	Srp9	100	93.023	ENSCPOG00000033454	SRP9	100	93.023	Cavia_porcellus
ENSMUSG00000026511	Srp9	100	94.186	ENSCCAG00000034464	SRP9	100	94.186	Cebus_capucinus
ENSMUSG00000026511	Srp9	100	93.023	ENSCATG00000041813	SRP9	100	93.023	Cercocebus_atys
ENSMUSG00000026511	Srp9	100	94.186	ENSCLAG00000001368	-	100	94.186	Chinchilla_lanigera
ENSMUSG00000026511	Srp9	99	84.706	ENSCLAG00000017687	-	99	84.706	Chinchilla_lanigera
ENSMUSG00000026511	Srp9	58	92.000	ENSCHOG00000008435	-	100	92.000	Choloepus_hoffmanni
ENSMUSG00000026511	Srp9	100	91.860	ENSCHOG00000006096	-	100	91.860	Choloepus_hoffmanni
ENSMUSG00000026511	Srp9	100	58.140	ENSCHOG00000012912	-	100	58.140	Choloepus_hoffmanni
ENSMUSG00000026511	Srp9	100	88.372	ENSCPBG00000011999	SRP9	100	88.372	Chrysemys_picta_bellii
ENSMUSG00000026511	Srp9	100	91.860	ENSCANG00000012015	-	100	91.860	Colobus_angolensis_palliatus
ENSMUSG00000026511	Srp9	100	93.023	ENSCANG00000030765	-	100	93.023	Colobus_angolensis_palliatus
ENSMUSG00000026511	Srp9	100	97.674	ENSCGRG00001008910	Srp9	100	97.674	Cricetulus_griseus_chok1gshd
ENSMUSG00000026511	Srp9	74	93.750	ENSCGRG00000009651	Srp9	84	93.750	Cricetulus_griseus_crigri
ENSMUSG00000026511	Srp9	100	76.744	ENSCSEG00000018438	srp9	100	76.744	Cynoglossus_semilaevis
ENSMUSG00000026511	Srp9	100	79.070	ENSCVAG00000001083	srp9	100	79.070	Cyprinodon_variegatus
ENSMUSG00000026511	Srp9	100	76.744	ENSDARG00000042851	srp9	100	76.744	Danio_rerio
ENSMUSG00000026511	Srp9	100	91.860	ENSDNOG00000013412	-	100	91.860	Dasypus_novemcinctus
ENSMUSG00000026511	Srp9	85	38.356	FBgn0035827	Srp9	95	38.356	Drosophila_melanogaster
ENSMUSG00000026511	Srp9	100	81.395	ENSETEG00000012291	SRP9	100	81.395	Echinops_telfairi
ENSMUSG00000026511	Srp9	98	66.667	ENSEBUG00000009080	srp9	100	66.667	Eptatretus_burgeri
ENSMUSG00000026511	Srp9	100	91.860	ENSECAG00000033839	SRP9	100	91.860	Equus_caballus
ENSMUSG00000026511	Srp9	100	84.884	ENSEEUG00000001344	SRP9	100	84.884	Erinaceus_europaeus
ENSMUSG00000026511	Srp9	100	80.233	ENSELUG00000001506	srp9	100	80.233	Esox_lucius
ENSMUSG00000026511	Srp9	100	91.860	ENSFCAG00000010275	SRP9	62	91.860	Felis_catus
ENSMUSG00000026511	Srp9	100	87.209	ENSFALG00000011689	SRP9	100	87.209	Ficedula_albicollis
ENSMUSG00000026511	Srp9	100	93.023	ENSFDAG00000020469	SRP9	100	93.023	Fukomys_damarensis
ENSMUSG00000026511	Srp9	100	79.070	ENSFHEG00000011666	srp9	100	79.070	Fundulus_heteroclitus
ENSMUSG00000026511	Srp9	100	79.070	ENSGMOG00000003565	srp9	100	79.070	Gadus_morhua
ENSMUSG00000026511	Srp9	100	86.047	ENSGALG00000026009	SRP9	100	86.047	Gallus_gallus
ENSMUSG00000026511	Srp9	100	79.070	ENSGAFG00000009506	srp9	100	79.070	Gambusia_affinis
ENSMUSG00000026511	Srp9	100	77.907	ENSGACG00000004110	srp9	100	77.907	Gasterosteus_aculeatus
ENSMUSG00000026511	Srp9	100	88.372	ENSGAGG00000017129	SRP9	100	88.372	Gopherus_agassizii
ENSMUSG00000026511	Srp9	100	93.023	ENSGGOG00000011555	SRP9	100	93.023	Gorilla_gorilla
ENSMUSG00000026511	Srp9	100	77.907	ENSHBUG00000021430	srp9	100	77.907	Haplochromis_burtoni
ENSMUSG00000026511	Srp9	81	88.571	ENSHGLG00000019830	-	100	88.571	Heterocephalus_glaber_female
ENSMUSG00000026511	Srp9	100	91.860	ENSHGLG00000002329	SRP9	100	91.860	Heterocephalus_glaber_female
ENSMUSG00000026511	Srp9	100	88.372	ENSHGLG00000020168	-	100	88.372	Heterocephalus_glaber_female
ENSMUSG00000026511	Srp9	93	96.250	ENSHGLG00000020925	-	100	96.250	Heterocephalus_glaber_female
ENSMUSG00000026511	Srp9	98	83.333	ENSHGLG00000006535	-	99	83.333	Heterocephalus_glaber_female
ENSMUSG00000026511	Srp9	100	94.186	ENSHGLG00100019986	-	100	94.186	Heterocephalus_glaber_male
ENSMUSG00000026511	Srp9	100	88.372	ENSHGLG00100020800	-	100	88.372	Heterocephalus_glaber_male
ENSMUSG00000026511	Srp9	100	76.744	ENSHGLG00100011806	-	100	76.744	Heterocephalus_glaber_male
ENSMUSG00000026511	Srp9	95	90.244	ENSHGLG00100016521	-	100	90.244	Heterocephalus_glaber_male
ENSMUSG00000026511	Srp9	98	83.333	ENSHGLG00100009760	-	99	83.333	Heterocephalus_glaber_male
ENSMUSG00000026511	Srp9	100	55.814	ENSHCOG00000006978	srp9	100	55.814	Hippocampus_comes
ENSMUSG00000026511	Srp9	100	79.070	ENSIPUG00000020674	srp9	100	79.070	Ictalurus_punctatus
ENSMUSG00000026511	Srp9	100	91.860	ENSSTOG00000026827	SRP9	100	91.860	Ictidomys_tridecemlineatus
ENSMUSG00000026511	Srp9	100	89.535	ENSJJAG00000016583	Srp9	100	89.535	Jaculus_jaculus
ENSMUSG00000026511	Srp9	100	79.070	ENSKMAG00000014117	srp9	100	79.070	Kryptolebias_marmoratus
ENSMUSG00000026511	Srp9	100	77.907	ENSLBEG00000020620	srp9	100	77.907	Labrus_bergylta
ENSMUSG00000026511	Srp9	100	81.395	ENSLACG00000007546	SRP9	100	81.395	Latimeria_chalumnae
ENSMUSG00000026511	Srp9	100	81.395	ENSLOCG00000015903	srp9	100	81.395	Lepisosteus_oculatus
ENSMUSG00000026511	Srp9	100	93.023	ENSLAFG00000004081	SRP9	100	93.023	Loxodonta_africana
ENSMUSG00000026511	Srp9	100	93.023	ENSMFAG00000002641	SRP9	100	93.023	Macaca_fascicularis
ENSMUSG00000026511	Srp9	100	93.023	ENSMMUG00000000134	SRP9	100	93.023	Macaca_mulatta
ENSMUSG00000026511	Srp9	100	93.023	ENSMNEG00000043512	SRP9	100	93.023	Macaca_nemestrina
ENSMUSG00000026511	Srp9	100	93.023	ENSMLEG00000037309	SRP9	100	93.023	Mandrillus_leucophaeus
ENSMUSG00000026511	Srp9	100	77.907	ENSMAMG00000004755	srp9	100	77.907	Mastacembelus_armatus
ENSMUSG00000026511	Srp9	100	77.907	ENSMZEG00005015517	srp9	100	77.907	Maylandia_zebra
ENSMUSG00000026511	Srp9	100	86.047	ENSMGAG00000008061	SRP9	100	86.047	Meleagris_gallopavo
ENSMUSG00000026511	Srp9	100	97.674	ENSMAUG00000017552	Srp9	100	97.674	Mesocricetus_auratus
ENSMUSG00000026511	Srp9	100	90.698	ENSMICG00000030104	-	100	90.698	Microcebus_murinus
ENSMUSG00000026511	Srp9	100	97.674	ENSMOCG00000012590	Srp9	100	97.674	Microtus_ochrogaster
ENSMUSG00000026511	Srp9	100	74.713	ENSMMOG00000014838	srp9	100	74.713	Mola_mola
ENSMUSG00000026511	Srp9	100	91.860	ENSMODG00000025664	SRP9	100	91.860	Monodelphis_domestica
ENSMUSG00000026511	Srp9	100	75.581	ENSMALG00000004262	srp9	100	75.581	Monopterus_albus
ENSMUSG00000026511	Srp9	100	100.000	MGP_CAROLIEiJ_G0014997	Srp9	100	100.000	Mus_caroli
ENSMUSG00000026511	Srp9	100	97.674	MGP_PahariEiJ_G0028229	Srp9	100	97.674	Mus_pahari
ENSMUSG00000026511	Srp9	100	100.000	MGP_SPRETEiJ_G0015797	Srp9	100	100.000	Mus_spretus
ENSMUSG00000026511	Srp9	100	93.023	ENSMLUG00000014914	SRP9	100	93.023	Myotis_lucifugus
ENSMUSG00000026511	Srp9	100	98.837	ENSNGAG00000019936	Srp9	100	98.837	Nannospalax_galili
ENSMUSG00000026511	Srp9	100	77.907	ENSNBRG00000010915	srp9	100	77.907	Neolamprologus_brichardi
ENSMUSG00000026511	Srp9	100	93.023	ENSNLEG00000013740	SRP9	100	93.023	Nomascus_leucogenys
ENSMUSG00000026511	Srp9	100	91.860	ENSOPRG00000012133	SRP9	100	91.860	Ochotona_princeps
ENSMUSG00000026511	Srp9	100	90.698	ENSODEG00000015075	-	100	90.698	Octodon_degus
ENSMUSG00000026511	Srp9	100	87.500	ENSODEG00000010125	-	76	87.500	Octodon_degus
ENSMUSG00000026511	Srp9	100	76.744	ENSONIG00000011409	srp9	100	76.744	Oreochromis_niloticus
ENSMUSG00000026511	Srp9	100	90.698	ENSOANG00000001472	SRP9	100	90.698	Ornithorhynchus_anatinus
ENSMUSG00000026511	Srp9	100	91.860	ENSOCUG00000010791	SRP9	100	91.860	Oryctolagus_cuniculus
ENSMUSG00000026511	Srp9	100	76.744	ENSORLG00020003090	srp9	100	76.744	Oryzias_latipes_hni
ENSMUSG00000026511	Srp9	100	76.744	ENSORLG00015001636	srp9	89	76.744	Oryzias_latipes_hsok
ENSMUSG00000026511	Srp9	100	77.907	ENSOMEG00000020548	srp9	100	77.907	Oryzias_melastigma
ENSMUSG00000026511	Srp9	100	93.023	ENSOGAG00000001752	-	100	93.023	Otolemur_garnettii
ENSMUSG00000026511	Srp9	100	93.023	ENSOGAG00000031299	-	100	93.023	Otolemur_garnettii
ENSMUSG00000026511	Srp9	100	93.023	ENSPPAG00000042680	SRP9	100	93.023	Pan_paniscus
ENSMUSG00000026511	Srp9	100	91.860	ENSPPRG00000011732	SRP9	100	91.860	Panthera_pardus
ENSMUSG00000026511	Srp9	71	91.803	ENSPTIG00000014838	SRP9	71	91.803	Panthera_tigris_altaica
ENSMUSG00000026511	Srp9	100	93.023	ENSPTRG00000002038	SRP9	100	93.023	Pan_troglodytes
ENSMUSG00000026511	Srp9	100	93.023	ENSPANG00000030164	SRP9	100	93.023	Papio_anubis
ENSMUSG00000026511	Srp9	100	76.744	ENSPKIG00000015012	srp9	100	76.744	Paramormyrops_kingsleyae
ENSMUSG00000026511	Srp9	100	88.372	ENSPSIG00000014842	SRP9	100	88.372	Pelodiscus_sinensis
ENSMUSG00000026511	Srp9	100	55.814	ENSPMGG00000002318	srp9	100	55.814	Periophthalmus_magnuspinnatus
ENSMUSG00000026511	Srp9	100	97.674	ENSPEMG00000022774	Srp9	100	97.674	Peromyscus_maniculatus_bairdii
ENSMUSG00000026511	Srp9	100	91.860	ENSPCIG00000017399	SRP9	100	91.860	Phascolarctos_cinereus
ENSMUSG00000026511	Srp9	100	79.070	ENSPREG00000020242	srp9	100	79.070	Poecilia_reticulata
ENSMUSG00000026511	Srp9	97	92.771	ENSPPYG00000000174	SRP9	100	92.771	Pongo_abelii
ENSMUSG00000026511	Srp9	100	93.023	ENSPCAG00000014886	SRP9	100	93.023	Procavia_capensis
ENSMUSG00000026511	Srp9	71	88.525	ENSPCOG00000021743	-	98	88.525	Propithecus_coquereli
ENSMUSG00000026511	Srp9	100	70.787	ENSPCOG00000012531	-	100	70.787	Propithecus_coquereli
ENSMUSG00000026511	Srp9	100	91.860	ENSPVAG00000008142	SRP9	100	91.860	Pteropus_vampyrus
ENSMUSG00000026511	Srp9	100	77.907	ENSPNYG00000010536	srp9	100	77.907	Pundamilia_nyererei
ENSMUSG00000026511	Srp9	100	76.744	ENSPNAG00000008264	srp9	100	76.744	Pygocentrus_nattereri
ENSMUSG00000026511	Srp9	100	97.674	ENSRNOG00000003211	Srp9	100	97.674	Rattus_norvegicus
ENSMUSG00000026511	Srp9	100	93.023	ENSRBIG00000040480	SRP9	100	93.023	Rhinopithecus_bieti
ENSMUSG00000026511	Srp9	100	93.023	ENSRROG00000028703	SRP9	100	93.023	Rhinopithecus_roxellana
ENSMUSG00000026511	Srp9	100	95.349	ENSSBOG00000034573	SRP9	100	95.349	Saimiri_boliviensis_boliviensis
ENSMUSG00000026511	Srp9	100	91.860	ENSSHAG00000013504	SRP9	100	91.860	Sarcophilus_harrisii
ENSMUSG00000026511	Srp9	100	77.907	ENSSFOG00015000310	srp9	100	77.907	Scleropages_formosus
ENSMUSG00000026511	Srp9	100	77.907	ENSSMAG00000001318	srp9	100	77.907	Scophthalmus_maximus
ENSMUSG00000026511	Srp9	100	77.907	ENSSDUG00000008772	srp9	100	77.907	Seriola_dumerili
ENSMUSG00000026511	Srp9	87	82.667	ENSSLDG00000019141	srp9	95	82.667	Seriola_lalandi_dorsalis
ENSMUSG00000026511	Srp9	99	67.059	ENSSPUG00000014436	SRP9	99	67.059	Sphenodon_punctatus
ENSMUSG00000026511	Srp9	100	77.907	ENSSPAG00000017244	srp9	100	77.907	Stegastes_partitus
ENSMUSG00000026511	Srp9	100	91.860	ENSSSCG00000031664	-	100	91.860	Sus_scrofa
ENSMUSG00000026511	Srp9	100	87.209	ENSTGUG00000004123	SRP9	100	87.209	Taeniopygia_guttata
ENSMUSG00000026511	Srp9	100	76.744	ENSTRUG00000024107	srp9	100	76.744	Takifugu_rubripes
ENSMUSG00000026511	Srp9	100	77.907	ENSTNIG00000007254	srp9	100	77.907	Tetraodon_nigroviridis
ENSMUSG00000026511	Srp9	100	89.535	ENSTBEG00000005634	SRP9	100	89.535	Tupaia_belangeri
ENSMUSG00000026511	Srp9	71	91.803	ENSTTRG00000010081	SRP9	98	91.803	Tursiops_truncatus
ENSMUSG00000026511	Srp9	100	91.860	ENSUAMG00000020489	SRP9	100	91.860	Ursus_americanus
ENSMUSG00000026511	Srp9	100	91.860	ENSUMAG00000015908	SRP9	100	91.860	Ursus_maritimus
ENSMUSG00000026511	Srp9	71	91.803	ENSVPAG00000001698	SRP9	98	91.803	Vicugna_pacos
ENSMUSG00000026511	Srp9	100	91.860	ENSVVUG00000002065	SRP9	100	91.860	Vulpes_vulpes
ENSMUSG00000026511	Srp9	100	77.907	ENSXCOG00000000662	srp9	100	77.907	Xiphophorus_couchianus
ENSMUSG00000026511	Srp9	100	77.907	ENSXMAG00000029514	srp9	100	77.907	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005786	signal recognition particle, endoplasmic reticulum targeting	21873635.	IBA	Component
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	-	IEA	Process
GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation	21873635.	IBA	Process
GO:0008312	7S RNA binding	-	IEA	Function
GO:0045900	negative regulation of translational elongation	-	IEA	Process
GO:0048500	signal recognition particle	-	IEA	Component