EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026516 (Gene tree)
Gene ID: 67459
Gene Symbol: Nvl
Alias: 1200009I24Rik
Full Name: nuclear VCP-like
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 57067
Position: chr1: 181087138-181144204
Accession: 1914709
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000195209	-	1193	-	-	- (aa)	-	-
ENSMUST00000191721	-	603	-	-	- (aa)	-	-
ENSMUST00000191728	-	1502	-	-	- (aa)	-	-
ENSMUST00000193758	-	2529	-	-	- (aa)	-	-
ENSMUST00000027797	-	9392	XM_006496964	ENSMUSP00000027797	855 (aa)	XP_006497027	Q9DBY8

Gene Model

Click here to download ENSMUSG00000026516's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026516's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026516	Nvl	100	87.850	ENSG00000143748	NVL	100	89.339	Homo_sapiens
ENSMUSG00000026516	Nvl	69	50.479	YLL034C		74	50.160	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000176	nuclear exosome (RNase complex)	-	ISO	Component
GO:0005524	ATP binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005697	telomerase holoenzyme complex	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0006364	rRNA processing	-	ISO	Process
GO:0016887	ATPase activity	21873635.	IBA	Function
GO:0032092	positive regulation of protein binding	-	ISO	Process
GO:0042254	ribosome biogenesis	21873635.	IBA	Process
GO:0042254	ribosome biogenesis	-	ISO	Process
GO:0042273	ribosomal large subunit biogenesis	-	ISO	Process
GO:0051973	positive regulation of telomerase activity	21873635.	IBA	Process
GO:0051973	positive regulation of telomerase activity	-	ISO	Process
GO:1904749	regulation of protein localization to nucleolus	-	ISO	Process
GO:1990275	preribosome binding	21873635.	IBA	Function
GO:1990275	preribosome binding	-	ISO	Function