EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026605 (Gene tree)
Gene ID: 108000
Gene Symbol: Cenpf
Alias: 6530404A22Rik|Lek1|mitosin
Full Name: centromere protein F
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 47481
Position: chr1: 189640606-189688086
Accession: 1313302
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000165663	-	609	-	ENSMUSP00000130308	88 (aa)	-	E9Q776
ENSMUST00000165798	-	358	-	ENSMUSP00000132430	119 (aa)	-	F6V6F0
ENSMUST00000165962	-	3001	-	ENSMUSP00000132759	952 (aa)	-	E9PY14
ENSMUST00000194165	-	1027	-	-	- (aa)	-	-
ENSMUST00000171929	-	11130	XM_006497119	ENSMUSP00000129738	2997 (aa)	XP_006497182	E9Q3P4
ENSMUST00000194624	-	3389	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000026605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026605's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026605	Cenpf	100	71.853	ENSG00000117724	CENPF	100	66.329	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000278	mitotic cell cycle	-	ISO	Process
GO:0000775	chromosome, centromeric region	11084331.	ISO	Component
GO:0000776	kinetochore	10373470.	IDA	Component
GO:0000922	spindle pole	-	ISO	Component
GO:0000940	condensed chromosome outer kinetochore	-	ISO	Component
GO:0001822	kidney development	-	ISO	Process
GO:0005634	nucleus	10373470.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	15494374.	ISS	Component
GO:0005635	nuclear envelope	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005813	centrosome	25564561.	IDA	Component
GO:0005819	spindle	-	ISO	Component
GO:0005930	axoneme	25564561.	IDA	Component
GO:0007059	chromosome segregation	-	ISO	Process
GO:0008022	protein C-terminus binding	-	ISO	Function
GO:0008134	transcription factor binding	-	ISO	Function
GO:0010389	regulation of G2/M transition of mitotic cell cycle	-	ISO	Process
GO:0015031	protein transport	-	ISO	Process
GO:0016202	regulation of striated muscle tissue development	10373470.	IDA	Process
GO:0016363	nuclear matrix	-	ISO	Component
GO:0021591	ventricular system development	-	ISO	Process
GO:0030496	midbody	-	ISO	Component
GO:0036064	ciliary basal body	25564561.	IDA	Component
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0045120	pronucleus	10373470.	IDA	Component
GO:0045892	negative regulation of transcription, DNA-templated	-	ISO	Process
GO:0051310	metaphase plate congression	-	ISO	Process
GO:0070840	dynein complex binding	-	ISO	Function
GO:0097539	ciliary transition fiber	25564561.	IDA	Component
GO:0097539	ciliary transition fiber	-	ISO	Component