EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026740 (Gene tree)
Gene ID: 13418
Gene Symbol: Dnajc1
Alias: 4733401K02Rik|D230036H06Rik|Dnajl1|ERdj1|MTJ1
Full Name: DnaJ heat shock protein family (Hsp40) member C1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 197177
Position: chr2: 18195654-18392830
Accession: 103268
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000165793	-	749	-	-	- (aa)	-	-
ENSMUST00000163130	-	1490	-	ENSMUSP00000129176	79 (aa)	-	F6YK70
ENSMUST00000091418	-	5070	-	ENSMUSP00000088980	552 (aa)	-	Q61712
ENSMUST00000153055	-	1001	-	-	- (aa)	-	-
ENSMUST00000168723	-	1175	XM_011238947	ENSMUSP00000126716	357 (aa)	XP_011237249	F6ZL86
ENSMUST00000148401	-	456	-	ENSMUSP00000132289	58 (aa)	-	F6WEH1
ENSMUST00000164606	-	2850	-	-	- (aa)	-	-
ENSMUST00000028072	-	1876	-	ENSMUSP00000028072	105 (aa)	-	F8WH68
ENSMUST00000172210	-	720	-	-	- (aa)	-	-
ENSMUST00000166495	-	5497	-	ENSMUSP00000126321	552 (aa)	-	Q61712
ENSMUST00000164835	-	746	-	ENSMUSP00000128687	34 (aa)	-	F7C8U2

Gene Model

Click here to download ENSMUSG00000026740's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026740's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026740	Dnajc1	98	92.982	ENSG00000136770	DNAJC1	100	84.173	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0005515	protein binding	12065409.16271702.	IPI	Function
GO:0005634	nucleus	14668352.	TAS	Component
GO:0005783	endoplasmic reticulum	12065409.	IDA	Component
GO:0005788	endoplasmic reticulum lumen	14668352.	TAS	Component
GO:0005886	plasma membrane	22837305.	IDA	Component
GO:0006417	regulation of translation	12065409.	IDA	Process
GO:0006457	protein folding	12065409.	IDA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	14668352.	TAS	Component
GO:0043022	ribosome binding	14668352.	TAS	Function
GO:0043231	intracellular membrane-bounded organelle	-	IEA	Component
GO:0050708	regulation of protein secretion	-	ISO	Process
GO:0051087	chaperone binding	12065409.	IDA	Function