EuRBPDB

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  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000026790 (Gene tree)
Gene ID
18286
Gene Symbol
Odf2
Alias
MMTEST29|cenexin
Full Name
outer dense fiber of sperm tails 2
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Plus strand
Length
42526
Position
chr2: 29889221-29931746
Accession
1098824
RBP type
non-canonical RBP
Summary
-
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000150827-349--- (aa)--
ENSMUST00000113763-2364-ENSMUSP00000109392638 (aa)-A3KGV1
ENSMUST00000153216-828--- (aa)--
ENSMUST00000137558-814-ENSMUSP00000117887271 (aa)-F6Y325
ENSMUST00000113764-2450-ENSMUSP00000109393638 (aa)-A3KGV1
ENSMUST00000113767-2249-ENSMUSP00000109396701 (aa)-A3KGW0
ENSMUST00000184845-3035-ENSMUSP00000139390680 (aa)-V9GXZ0
ENSMUST00000152503-4291--- (aa)--
ENSMUST00000148883-437--- (aa)--
ENSMUST00000131165-553--- (aa)--
ENSMUST00000129960-674--- (aa)--
ENSMUST00000130899-395--- (aa)--
ENSMUST00000152026-673--- (aa)--
ENSMUST00000133233-658-ENSMUSP00000117628138 (aa)-A3KGV3
ENSMUST00000113762-2353-ENSMUSP00000109391657 (aa)-A3KGV9
ENSMUST00000113759-3807XM_017316290ENSMUSP00000109388826 (aa)XP_017171779A3KGV1
ENSMUST00000113755-2305XM_017316305ENSMUSP00000109384652 (aa)XP_017171794A3KGV1
ENSMUST00000113756-3826-ENSMUSP00000109385825 (aa)-A3KGV1
ENSMUST00000113757-3082XM_017316300ENSMUSP00000109386806 (aa)XP_017171789A3KGV1
ENSMUST00000046571-3959XM_017316293ENSMUSP00000049272825 (aa)XP_017171782A3KGV1
ENSMUST00000113765-3188XM_017316272ENSMUSP00000109394830 (aa)XP_017171761A3KGV1
ENSMUST00000152932-793--- (aa)--
ENSMUST00000126103-589--- (aa)--
ENSMUST00000123335-403-ENSMUSP0000012120769 (aa)-A3KGV2
ENSMUST00000028128-2376-ENSMUSP00000028128638 (aa)-A3KGV1
Gene Model
Click here to download ENSMUSG00000026790's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026790's network
Orthologs identified by RBPome
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000026790Odf210099.275ENSG00000136811ODF210099.359Homo_sapiens
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005200structural constituent of cytoskeleton9740324.TASFunction
GO:0005515protein binding26961893.IPIFunction
GO:0005737cytoplasm-IEAComponent
GO:0005813centrosome23386061.IDAComponent
GO:0005813centrosome-ISOComponent
GO:0005814centriole16297385.19625297.IDAComponent
GO:0005814centriole24421332.ISOComponent
GO:0005856cytoskeleton-IEAComponent
GO:0005874microtubule-IEAComponent
GO:0005929cilium16687649.16920728.IDAComponent
GO:0007275multicellular organism development-IEAProcess
GO:0007283spermatogenesis-IEAProcess
GO:0008104protein localization-ISOProcess
GO:0010457centriole-centriole cohesion-ISOProcess
GO:0017137Rab GTPase binding-ISOFunction
GO:0030154cell differentiation-IEAProcess
GO:0031514motile cilium-IEAComponent
GO:0036064ciliary basal body-ISOComponent
GO:0036126sperm flagellum25361759.27682589.IDAComponent
GO:0042995cell projection-IEAComponent
GO:0044782cilium organization-ISOProcess
GO:0097539ciliary transition fiber24947469.IDAComponent
GO:0120103centriolar subdistal appendage-ISOComponent
GO:1902017regulation of cilium assembly-ISOProcess

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