EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000026806 (Gene tree)
Gene ID: 227674
Gene Symbol: Ddx31
Alias: 5830444G11Rik
Full Name: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 65166 bases
Position: chr2:28840406-28905571
Accession: 2682639
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000109484	ResIII	PF04851.15	2.2e-07	1	1
ENSMUSP00000109484	DEAD	PF00270.29	7.3e-47	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000113853	-	3271	XM_006497923	ENSMUSP00000109484	687 (aa)	XP_006497986	Q6NZQ2
ENSMUST00000147071	-	640	-	-	- (aa)	-	-
ENSMUST00000147779	-	903	-	-	- (aa)	-	-
ENSMUST00000152685	-	581	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000026806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000026806's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000026806	Ddx31	63	31.136	ENSMUSG00000057788	Ddx49	81	31.136
ENSMUSG00000026806	Ddx31	56	30.296	ENSMUSG00000045538	Ddx28	68	30.296
ENSMUSG00000026806	Ddx31	72	36.327	ENSMUSG00000001674	Ddx18	65	36.327
ENSMUSG00000026806	Ddx31	61	31.765	ENSMUSG00000030204	Ddx47	84	35.652
ENSMUSG00000026806	Ddx31	56	31.313	ENSMUSG00000020719	Ddx5	71	30.861
ENSMUSG00000026806	Ddx31	54	31.579	ENSMUSG00000055065	Ddx17	53	30.556
ENSMUSG00000026806	Ddx31	74	31.783	ENSMUSG00000029389	Ddx55	75	31.528
ENSMUSG00000026806	Ddx31	53	30.214	ENSMUSG00000021494	Ddx41	52	30.214

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000026806	Ddx31	99	79.624	ENSG00000125485	DDX31	92	79.624	Homo_sapiens
ENSMUSG00000026806	Ddx31	86	60.065	ENSAPOG00000004212	ddx31	95	55.811	Acanthochromis_polyacanthus
ENSMUSG00000026806	Ddx31	97	79.063	ENSAMEG00000004120	DDX31	94	79.063	Ailuropoda_melanoleuca
ENSMUSG00000026806	Ddx31	78	61.213	ENSACIG00000006033	ddx31	90	60.179	Amphilophus_citrinellus
ENSMUSG00000026806	Ddx31	56	63.427	ENSAOCG00000023183	ddx31	72	63.427	Amphiprion_ocellaris
ENSMUSG00000026806	Ddx31	86	60.454	ENSATEG00000015522	ddx31	87	56.421	Anabas_testudineus
ENSMUSG00000026806	Ddx31	95	65.082	ENSAPLG00000016396	DDX31	99	64.306	Anas_platyrhynchos
ENSMUSG00000026806	Ddx31	99	79.480	ENSANAG00000035120	DDX31	94	79.480	Aotus_nancymaae
ENSMUSG00000026806	Ddx31	86	59.091	ENSACLG00000008720	ddx31	99	57.471	Astatotilapia_calliptera
ENSMUSG00000026806	Ddx31	82	58.319	ENSAMXG00000009673	ddx31	93	55.118	Astyanax_mexicanus
ENSMUSG00000026806	Ddx31	99	76.252	ENSBTAG00000003530	DDX31	95	77.663	Bos_taurus
ENSMUSG00000026806	Ddx31	99	79.624	ENSCJAG00000018173	DDX31	95	82.363	Callithrix_jacchus
ENSMUSG00000026806	Ddx31	85	80.607	ENSCAFG00020024548	DDX31	87	80.607	Canis_lupus_dingo
ENSMUSG00000026806	Ddx31	99	75.499	ENSCHIG00000020011	DDX31	95	75.499	Capra_hircus
ENSMUSG00000026806	Ddx31	98	76.006	ENSTSYG00000009182	DDX31	94	75.971	Carlito_syrichta
ENSMUSG00000026806	Ddx31	99	74.928	ENSCAPG00000015227	DDX31	96	74.928	Cavia_aperea
ENSMUSG00000026806	Ddx31	99	76.556	ENSCPOG00000014243	DDX31	93	76.556	Cavia_porcellus
ENSMUSG00000026806	Ddx31	99	79.913	ENSCCAG00000025989	DDX31	92	79.913	Cebus_capucinus
ENSMUSG00000026806	Ddx31	99	77.168	ENSCATG00000038462	DDX31	91	77.168	Cercocebus_atys
ENSMUSG00000026806	Ddx31	99	79.595	ENSCLAG00000008431	DDX31	99	79.595	Chinchilla_lanigera
ENSMUSG00000026806	Ddx31	99	79.769	ENSCSAG00000014953	DDX31	92	79.769	Chlorocebus_sabaeus
ENSMUSG00000026806	Ddx31	99	76.990	ENSCHOG00000001526	DDX31	94	76.990	Choloepus_hoffmanni
ENSMUSG00000026806	Ddx31	76	69.850	ENSCPBG00000021215	DDX31	94	69.850	Chrysemys_picta_bellii
ENSMUSG00000026806	Ddx31	79	47.368	ENSCING00000009272	-	87	47.368	Ciona_intestinalis
ENSMUSG00000026806	Ddx31	74	45.455	ENSCSAVG00000004227	-	96	45.455	Ciona_savignyi
ENSMUSG00000026806	Ddx31	99	80.029	ENSCANG00000036241	DDX31	93	81.538	Colobus_angolensis_palliatus
ENSMUSG00000026806	Ddx31	99	90.671	ENSCGRG00001014191	Ddx31	96	90.671	Cricetulus_griseus_chok1gshd
ENSMUSG00000026806	Ddx31	99	90.671	ENSCGRG00000008396	Ddx31	96	90.671	Cricetulus_griseus_crigri
ENSMUSG00000026806	Ddx31	87	57.861	ENSCSEG00000008541	ddx31	90	53.701	Cynoglossus_semilaevis
ENSMUSG00000026806	Ddx31	87	58.678	ENSCVAG00000000189	ddx31	99	58.509	Cyprinodon_variegatus
ENSMUSG00000026806	Ddx31	89	60.350	ENSDARG00000035507	ddx31	85	59.438	Danio_rerio
ENSMUSG00000026806	Ddx31	99	78.211	ENSDNOG00000009865	DDX31	95	78.211	Dasypus_novemcinctus
ENSMUSG00000026806	Ddx31	99	79.825	ENSDORG00000005071	Ddx31	99	79.825	Dipodomys_ordii
ENSMUSG00000026806	Ddx31	77	40.517	FBgn0027602	CG8611	60	41.270	Drosophila_melanogaster
ENSMUSG00000026806	Ddx31	91	71.831	ENSETEG00000007908	DDX31	83	71.831	Echinops_telfairi
ENSMUSG00000026806	Ddx31	67	40.381	ENSEBUG00000014723	-	99	40.381	Eptatretus_burgeri
ENSMUSG00000026806	Ddx31	99	79.598	ENSEASG00005009845	DDX31	95	79.630	Equus_asinus_asinus
ENSMUSG00000026806	Ddx31	99	79.454	ENSECAG00000005146	DDX31	95	79.487	Equus_caballus
ENSMUSG00000026806	Ddx31	99	74.964	ENSEEUG00000012785	DDX31	92	74.964	Erinaceus_europaeus
ENSMUSG00000026806	Ddx31	93	57.846	ENSELUG00000001052	ddx31	88	57.079	Esox_lucius
ENSMUSG00000026806	Ddx31	97	72.059	ENSFCAG00000007106	DDX31	95	72.059	Felis_catus
ENSMUSG00000026806	Ddx31	96	65.630	ENSFALG00000001468	DDX31	100	64.143	Ficedula_albicollis
ENSMUSG00000026806	Ddx31	99	80.259	ENSFDAG00000007853	DDX31	99	80.259	Fukomys_damarensis
ENSMUSG00000026806	Ddx31	87	59.171	ENSFHEG00000009047	ddx31	84	59.048	Fundulus_heteroclitus
ENSMUSG00000026806	Ddx31	63	68.597	ENSGALG00000041473	DDX31	91	68.597	Gallus_gallus
ENSMUSG00000026806	Ddx31	86	58.525	ENSGAFG00000009888	ddx31	86	58.091	Gambusia_affinis
ENSMUSG00000026806	Ddx31	97	69.163	ENSGAGG00000012482	DDX31	94	69.163	Gopherus_agassizii
ENSMUSG00000026806	Ddx31	99	79.624	ENSGGOG00000008314	DDX31	91	76.012	Gorilla_gorilla
ENSMUSG00000026806	Ddx31	87	58.240	ENSHBUG00000019539	ddx31	73	57.143	Haplochromis_burtoni
ENSMUSG00000026806	Ddx31	98	80.234	ENSHGLG00000013194	DDX31	97	78.315	Heterocephalus_glaber_female
ENSMUSG00000026806	Ddx31	91	79.233	ENSHGLG00100016868	DDX31	100	79.233	Heterocephalus_glaber_male
ENSMUSG00000026806	Ddx31	82	61.922	ENSHCOG00000020998	ddx31	92	57.323	Hippocampus_comes
ENSMUSG00000026806	Ddx31	96	57.207	ENSIPUG00000020592	ddx31	93	56.788	Ictalurus_punctatus
ENSMUSG00000026806	Ddx31	97	74.638	ENSSTOG00000007985	DDX31	99	74.638	Ictidomys_tridecemlineatus
ENSMUSG00000026806	Ddx31	97	77.049	ENSJJAG00000018491	Ddx31	98	77.049	Jaculus_jaculus
ENSMUSG00000026806	Ddx31	75	62.595	ENSKMAG00000006165	ddx31	96	62.382	Kryptolebias_marmoratus
ENSMUSG00000026806	Ddx31	80	62.970	ENSLBEG00000008550	ddx31	94	53.686	Labrus_bergylta
ENSMUSG00000026806	Ddx31	74	59.501	ENSLACG00000008136	DDX31	95	59.501	Latimeria_chalumnae
ENSMUSG00000026806	Ddx31	95	55.263	ENSLOCG00000005630	ddx31	92	55.051	Lepisosteus_oculatus
ENSMUSG00000026806	Ddx31	99	79.769	ENSLAFG00000015379	DDX31	99	79.769	Loxodonta_africana
ENSMUSG00000026806	Ddx31	99	80.347	ENSMFAG00000036342	DDX31	80	80.347	Macaca_fascicularis
ENSMUSG00000026806	Ddx31	99	80.202	ENSMMUG00000004590	DDX31	92	80.202	Macaca_mulatta
ENSMUSG00000026806	Ddx31	99	80.202	ENSMNEG00000045539	DDX31	94	83.151	Macaca_nemestrina
ENSMUSG00000026806	Ddx31	99	80.202	ENSMLEG00000032393	DDX31	80	80.202	Mandrillus_leucophaeus
ENSMUSG00000026806	Ddx31	87	59.709	ENSMAMG00000019252	ddx31	89	58.833	Mastacembelus_armatus
ENSMUSG00000026806	Ddx31	86	57.815	ENSMZEG00005020937	ddx31	99	56.908	Maylandia_zebra
ENSMUSG00000026806	Ddx31	94	65.191	ENSMGAG00000006002	DDX31	98	63.861	Meleagris_gallopavo
ENSMUSG00000026806	Ddx31	92	90.174	ENSMAUG00000016824	Ddx31	99	90.174	Mesocricetus_auratus
ENSMUSG00000026806	Ddx31	99	79.053	ENSMICG00000010581	DDX31	94	79.053	Microcebus_murinus
ENSMUSG00000026806	Ddx31	99	90.262	ENSMOCG00000020938	Ddx31	99	90.262	Microtus_ochrogaster
ENSMUSG00000026806	Ddx31	78	59.083	ENSMMOG00000020996	ddx31	96	58.273	Mola_mola
ENSMUSG00000026806	Ddx31	97	74.559	ENSMODG00000012555	DDX31	93	74.559	Monodelphis_domestica
ENSMUSG00000026806	Ddx31	89	57.098	ENSMALG00000002614	ddx31	86	56.656	Monopterus_albus
ENSMUSG00000026806	Ddx31	100	97.962	MGP_CAROLIEiJ_G0023360	Ddx31	100	97.962	Mus_caroli
ENSMUSG00000026806	Ddx31	100	97.234	MGP_PahariEiJ_G0024817	Ddx31	100	97.234	Mus_pahari
ENSMUSG00000026806	Ddx31	100	99.709	MGP_SPRETEiJ_G0024277	Ddx31	100	99.709	Mus_spretus
ENSMUSG00000026806	Ddx31	98	78.886	ENSMPUG00000012522	DDX31	80	78.886	Mustela_putorius_furo
ENSMUSG00000026806	Ddx31	98	70.732	ENSMLUG00000011507	DDX31	93	70.875	Myotis_lucifugus
ENSMUSG00000026806	Ddx31	99	83.721	ENSNGAG00000020928	Ddx31	99	83.721	Nannospalax_galili
ENSMUSG00000026806	Ddx31	87	59.539	ENSNBRG00000024320	ddx31	99	58.643	Neolamprologus_brichardi
ENSMUSG00000026806	Ddx31	99	79.913	ENSNLEG00000012870	DDX31	80	79.913	Nomascus_leucogenys
ENSMUSG00000026806	Ddx31	97	68.732	ENSMEUG00000008760	DDX31	94	68.732	Notamacropus_eugenii
ENSMUSG00000026806	Ddx31	65	88.626	ENSOPRG00000004477	-	72	88.626	Ochotona_princeps
ENSMUSG00000026806	Ddx31	98	72.059	ENSODEG00000015685	DDX31	99	72.941	Octodon_degus
ENSMUSG00000026806	Ddx31	86	60.691	ENSONIG00000000711	ddx31	92	59.184	Oreochromis_niloticus
ENSMUSG00000026806	Ddx31	91	73.386	ENSOANG00000005047	DDX31	99	73.386	Ornithorhynchus_anatinus
ENSMUSG00000026806	Ddx31	97	77.794	ENSOCUG00000008739	DDX31	99	77.794	Oryctolagus_cuniculus
ENSMUSG00000026806	Ddx31	86	58.039	ENSORLG00000016628	ddx31	81	56.000	Oryzias_latipes
ENSMUSG00000026806	Ddx31	86	57.234	ENSORLG00020017897	ddx31	83	56.127	Oryzias_latipes_hni
ENSMUSG00000026806	Ddx31	86	58.039	ENSOMEG00000004600	ddx31	80	54.797	Oryzias_melastigma
ENSMUSG00000026806	Ddx31	91	81.388	ENSOGAG00000004072	DDX31	99	81.388	Otolemur_garnettii
ENSMUSG00000026806	Ddx31	98	76.574	ENSOARG00000005879	DDX31	96	76.574	Ovis_aries
ENSMUSG00000026806	Ddx31	99	80.202	ENSPPAG00000027761	DDX31	91	76.590	Pan_paniscus
ENSMUSG00000026806	Ddx31	99	80.202	ENSPTRG00000021500	DDX31	91	76.590	Pan_troglodytes
ENSMUSG00000026806	Ddx31	99	79.769	ENSPANG00000025987	DDX31	80	79.769	Papio_anubis
ENSMUSG00000026806	Ddx31	97	67.057	ENSPSIG00000006722	DDX31	93	67.496	Pelodiscus_sinensis
ENSMUSG00000026806	Ddx31	97	52.000	ENSPMGG00000020721	ddx31	98	52.000	Periophthalmus_magnuspinnatus
ENSMUSG00000026806	Ddx31	99	90.247	ENSPEMG00000014798	Ddx31	99	90.247	Peromyscus_maniculatus_bairdii
ENSMUSG00000026806	Ddx31	97	74.853	ENSPCIG00000019742	DDX31	96	74.853	Phascolarctos_cinereus
ENSMUSG00000026806	Ddx31	88	57.571	ENSPFOG00000000144	ddx31	87	57.571	Poecilia_formosa
ENSMUSG00000026806	Ddx31	62	61.072	ENSPLAG00000019817	ddx31	92	56.907	Poecilia_latipinna
ENSMUSG00000026806	Ddx31	87	58.682	ENSPMEG00000018263	ddx31	94	55.182	Poecilia_mexicana
ENSMUSG00000026806	Ddx31	87	59.003	ENSPREG00000002870	-	86	59.003	Poecilia_reticulata
ENSMUSG00000026806	Ddx31	99	78.179	ENSPPYG00000019713	DDX31	80	78.179	Pongo_abelii
ENSMUSG00000026806	Ddx31	99	72.063	ENSPCAG00000004249	DDX31	83	72.063	Procavia_capensis
ENSMUSG00000026806	Ddx31	98	78.446	ENSPCOG00000010431	DDX31	82	78.446	Propithecus_coquereli
ENSMUSG00000026806	Ddx31	98	75.256	ENSPVAG00000002050	DDX31	83	75.403	Pteropus_vampyrus
ENSMUSG00000026806	Ddx31	86	58.923	ENSPNYG00000013810	ddx31	98	57.990	Pundamilia_nyererei
ENSMUSG00000026806	Ddx31	87	61.401	ENSPNAG00000022187	ddx31	85	60.703	Pygocentrus_nattereri
ENSMUSG00000026806	Ddx31	99	92.240	ENSRNOG00000013040	Ddx31	99	92.240	Rattus_norvegicus
ENSMUSG00000026806	Ddx31	99	77.746	ENSRBIG00000042353	DDX31	81	77.746	Rhinopithecus_bieti
ENSMUSG00000026806	Ddx31	99	80.202	ENSRROG00000044427	DDX31	96	83.219	Rhinopithecus_roxellana
ENSMUSG00000026806	Ddx31	81	33.603	YKR024C	-	91	31.805	Saccharomyces_cerevisiae
ENSMUSG00000026806	Ddx31	97	80.973	ENSSBOG00000021668	DDX31	92	79.913	Saimiri_boliviensis_boliviensis
ENSMUSG00000026806	Ddx31	98	74.052	ENSSHAG00000018804	DDX31	93	74.198	Sarcophilus_harrisii
ENSMUSG00000026806	Ddx31	89	62.298	ENSSFOG00015012974	ddx31	82	62.298	Scleropages_formosus
ENSMUSG00000026806	Ddx31	80	61.429	ENSSMAG00000017673	ddx31	78	56.897	Scophthalmus_maximus
ENSMUSG00000026806	Ddx31	79	57.401	ENSSDUG00000011751	ddx31	98	57.576	Seriola_dumerili
ENSMUSG00000026806	Ddx31	69	57.851	ENSSLDG00000005425	-	93	57.516	Seriola_lalandi_dorsalis
ENSMUSG00000026806	Ddx31	97	65.447	ENSSPUG00000016144	DDX31	99	65.447	Sphenodon_punctatus
ENSMUSG00000026806	Ddx31	56	64.675	ENSSPAG00000018034	ddx31	90	58.261	Stegastes_partitus
ENSMUSG00000026806	Ddx31	98	74.633	ENSSSCG00000005729	DDX31	93	72.515	Sus_scrofa
ENSMUSG00000026806	Ddx31	90	68.297	ENSTGUG00000005142	DDX31	100	68.297	Taeniopygia_guttata
ENSMUSG00000026806	Ddx31	88	54.116	ENSTRUG00000013699	ddx31	98	55.414	Takifugu_rubripes
ENSMUSG00000026806	Ddx31	90	56.731	ENSTNIG00000006039	ddx31	99	56.731	Tetraodon_nigroviridis
ENSMUSG00000026806	Ddx31	84	77.949	ENSTBEG00000013672	DDX31	97	77.949	Tupaia_belangeri
ENSMUSG00000026806	Ddx31	99	77.011	ENSTTRG00000014093	DDX31	84	77.011	Tursiops_truncatus
ENSMUSG00000026806	Ddx31	97	75.147	ENSUAMG00000024811	DDX31	91	75.147	Ursus_americanus
ENSMUSG00000026806	Ddx31	97	75.148	ENSUMAG00000016669	DDX31	97	74.574	Ursus_maritimus
ENSMUSG00000026806	Ddx31	64	76.471	ENSVPAG00000004538	-	55	76.046	Vicugna_pacos
ENSMUSG00000026806	Ddx31	85	80.438	ENSVVUG00000028399	DDX31	87	80.438	Vulpes_vulpes
ENSMUSG00000026806	Ddx31	90	60.539	ENSXETG00000006258	ddx31	99	60.539	Xenopus_tropicalis
ENSMUSG00000026806	Ddx31	80	55.292	ENSXCOG00000018753	ddx31	100	55.292	Xiphophorus_couchianus
ENSMUSG00000026806	Ddx31	87	58.333	ENSXMAG00000006678	ddx31	90	58.333	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0016787	hydrolase activity	-	IEA	Function
GO:0042254	ribosome biogenesis	-	ISO	Process
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component